RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 OCC1Q8TAD7 63 aa17.81■□□□□ 0.44
CPSF6-205ENST00000550075 SMIM7Q9BQ49 75 aa17.81■□□□□ 0.44
CPSF6-205ENST00000550075 FRAS1Q86XX4 4008 aa17.8■□□□□ 0.44
CPSF6-205ENST00000550075 CRYGDP07320 174 aa17.8■□□□□ 0.44
CPSF6-205ENST00000550075 IGLC6P0CF74 106 aa17.8■□□□□ 0.44
CPSF6-205ENST00000550075 Q6ZSN1 163 aa17.8■□□□□ 0.44
CPSF6-205ENST00000550075 C6orf223Q8N319 242 aa17.8■□□□□ 0.44
CPSF6-205ENST00000550075 AP1S3Q96PC3 154 aa17.8■□□□□ 0.44
CPSF6-205ENST00000550075 K7EN84 100 aa17.79■□□□□ 0.44
CPSF6-205ENST00000550075 RTL8CO15255 209 aa17.79■□□□□ 0.44
CPSF6-205ENST00000550075 GZMBP10144 247 aa17.79■□□□□ 0.44
CPSF6-205ENST00000550075 NUDT10Q8NFP7 164 aa17.79■□□□□ 0.44
CPSF6-205ENST00000550075 NUDT11Q96G61 164 aa17.79■□□□□ 0.44
CPSF6-205ENST00000550075 RPP21Q9H633 154 aaKnown RBP17.79■□□□□ 0.44
CPSF6-205ENST00000550075 LY96Q9Y6Y9 160 aa17.79■□□□□ 0.44
CPSF6-205ENST00000550075 MUC21A0A0G2JKD1 596 aa17.78■□□□□ 0.44
CPSF6-205ENST00000550075 MUC21A0A140T8X8 626 aa17.78■□□□□ 0.44
CPSF6-205ENST00000550075 F2Z2F3 143 aa17.78■□□□□ 0.44
CPSF6-205ENST00000550075 SMIM17P0DL12 118 aa17.78■□□□□ 0.44
CPSF6-205ENST00000550075 CACNG7P62955 275 aa17.78■□□□□ 0.44
CPSF6-205ENST00000550075 ATP6V0E2Q8NHE4 81 aa17.78■□□□□ 0.44
CPSF6-205ENST00000550075 GAGE12JA6NER3 117 aa17.77■□□□□ 0.44
CPSF6-205ENST00000550075 SRP19P09132 144 aaKnown RBP17.77■□□□□ 0.44
CPSF6-205ENST00000550075 GAGE1Q13065 139 aa17.77■□□□□ 0.44
CPSF6-205ENST00000550075 GAGE4Q13068 117 aa17.77■□□□□ 0.44
CPSF6-205ENST00000550075 GAGE5Q13069 117 aa17.77■□□□□ 0.44
CPSF6-205ENST00000550075 ZNF56Q15929 161 aa17.77■□□□□ 0.44
CPSF6-205ENST00000550075 GAGE13Q4V321 117 aa17.77■□□□□ 0.44
CPSF6-205ENST00000550075 C14orf178Q8N769 122 aaPredicted RBP17.77■□□□□ 0.44
CPSF6-205ENST00000550075 EPPK1P58107 5090 aaKnown RBP17.76■□□□□ 0.43
CPSF6-205ENST00000550075 PRSS29PA6NIE9 313 aa17.76■□□□□ 0.43
CPSF6-205ENST00000550075 ZNF727A8MUV8 499 aa17.76■□□□□ 0.43
CPSF6-205ENST00000550075 BTF3P20290 206 aaKnown RBP17.76■□□□□ 0.43
CPSF6-205ENST00000550075 RNASE7Q9H1E1 156 aaKnown RBP17.76■□□□□ 0.43
CPSF6-205ENST00000550075 GTSF1LQ9H1H1 148 aa17.76■□□□□ 0.43
CPSF6-205ENST00000550075 TRAV9-2A0A087WT02 112 aa17.75■□□□□ 0.43
CPSF6-205ENST00000550075 TRBV10-1A0A0K0K1A3 114 aa17.75■□□□□ 0.43
CPSF6-205ENST00000550075 RAB4BP61018 213 aa17.75■□□□□ 0.43
CPSF6-205ENST00000550075 SSTP61278 116 aa17.75■□□□□ 0.43
CPSF6-205ENST00000550075 TRAV8-6A0A0B4J262 113 aa17.74■□□□□ 0.43
CPSF6-205ENST00000550075 K7EP13 123 aa17.74■□□□□ 0.43
CPSF6-205ENST00000550075 LINC00694P0DN24 101 aa17.74■□□□□ 0.43
CPSF6-205ENST00000550075 FAM231DQ6ZW35 169 aa17.74■□□□□ 0.43
CPSF6-205ENST00000550075 WFDC10BQ8IUB3 73 aa17.74■□□□□ 0.43
CPSF6-205ENST00000550075 KRTAP1-5Q9BYS1 174 aa17.74■□□□□ 0.43
CPSF6-205ENST00000550075 DNAH2Q9P225 4427 aa17.74■□□□□ 0.43
CPSF6-205ENST00000550075 GATCO43716 136 aaKnown RBP17.73■□□□□ 0.43
CPSF6-205ENST00000550075 EVI2AP22794 236 aa17.73■□□□□ 0.43
CPSF6-205ENST00000550075 PEA15Q15121 130 aa17.73■□□□□ 0.43
CPSF6-205ENST00000550075 CTRLP40313 264 aa17.72■□□□□ 0.43
CPSF6-205ENST00000550075 RPL36AP83881 106 aaKnown RBP17.72■□□□□ 0.43
CPSF6-205ENST00000550075 FAM74A3Q4VXF1 159 aa17.72■□□□□ 0.43
CPSF6-205ENST00000550075 OR10J3Q5JRS4 329 aa17.72■□□□□ 0.43
CPSF6-205ENST00000550075 LELP1Q5T871 98 aa17.72■□□□□ 0.43
CPSF6-205ENST00000550075 RPL36ALQ969Q0 106 aaKnown RBP17.72■□□□□ 0.43
CPSF6-205ENST00000550075 SMDT1Q9H4I9 107 aa17.72■□□□□ 0.43
CPSF6-205ENST00000550075 TRGC1P0CF51 173 aa17.71■□□□□ 0.43
CPSF6-205ENST00000550075 DNAH10OSP0CZ25 163 aa17.71■□□□□ 0.43
CPSF6-205ENST00000550075 ERVFC1-1P60608 527 aa17.71■□□□□ 0.43
CPSF6-205ENST00000550075 LYZL1Q6UWQ5 148 aa17.71■□□□□ 0.43
CPSF6-205ENST00000550075 F5H697 171 aa17.7■□□□□ 0.42
CPSF6-205ENST00000550075 RAB14P61106 215 aa17.7■□□□□ 0.42
CPSF6-205ENST00000550075 WDR73Q6P4I2 378 aa17.7■□□□□ 0.42
CPSF6-205ENST00000550075 LINC01551Q86U37 167 aa17.7■□□□□ 0.42
CPSF6-205ENST00000550075 DNAH17Q9UFH2 4485 aa17.69■□□□□ 0.42
CPSF6-205ENST00000550075 A0A087WWC5 75 aa17.69■□□□□ 0.42
CPSF6-205ENST00000550075 A8MWL6 223 aa17.69■□□□□ 0.42
CPSF6-205ENST00000550075 CT83Q5H943 113 aa17.69■□□□□ 0.42
CPSF6-205ENST00000550075 C10orf126Q8N4M7 172 aa17.69■□□□□ 0.42
CPSF6-205ENST00000550075 IGHV3-38A0A0C4DH36 116 aa17.68■□□□□ 0.42
CPSF6-205ENST00000550075 HECTD4Q9Y4D8 3996 aa17.68■□□□□ 0.42
CPSF6-205ENST00000550075 TRBV7-3A0A075B6L6 115 aa17.67■□□□□ 0.42
CPSF6-205ENST00000550075 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.67■□□□□ 0.42
CPSF6-205ENST00000550075 Q9UF83 564 aa17.67■□□□□ 0.42
CPSF6-205ENST00000550075 KIF25-AS1Q9Y6Z4 181 aa17.67■□□□□ 0.42
CPSF6-205ENST00000550075 MGPP08493 103 aa17.66■□□□□ 0.42
CPSF6-205ENST00000550075 LINC00315P59091 139 aa17.66■□□□□ 0.42
CPSF6-205ENST00000550075 TMEM241Q24JQ0 296 aa17.66■□□□□ 0.42
CPSF6-205ENST00000550075 OR10G8Q8NGN5 311 aa17.66■□□□□ 0.42
CPSF6-205ENST00000550075 CNFNQ9BYD5 112 aa17.66■□□□□ 0.42
CPSF6-205ENST00000550075 MSRB1Q9NZV6 116 aa17.66■□□□□ 0.42
CPSF6-205ENST00000550075 H7C1H1 209 aa17.65■□□□□ 0.42
CPSF6-205ENST00000550075 NTF3P20783 257 aa17.65■□□□□ 0.42
CPSF6-205ENST00000550075 LINC01556Q5JQF7 62 aa17.65■□□□□ 0.42
CPSF6-205ENST00000550075 C15orf54Q8N8G6 183 aa17.65■□□□□ 0.42
CPSF6-205ENST00000550075 OSTCQ9NRP0 149 aa17.65■□□□□ 0.42
CPSF6-205ENST00000550075 FAT2Q9NYQ8 4349 aa17.64■□□□□ 0.42
CPSF6-205ENST00000550075 TWIST1Q15672 202 aa17.64■□□□□ 0.41
CPSF6-205ENST00000550075 NFE4Q86UQ8 179 aa17.64■□□□□ 0.41
CPSF6-205ENST00000550075 DPH3P1Q9H4G8 78 aa17.64■□□□□ 0.41
CPSF6-205ENST00000550075 NAT8Q9UHE5 227 aa17.64■□□□□ 0.41
CPSF6-205ENST00000550075 BIRC6Q9NR09 4857 aa17.63■□□□□ 0.41
CPSF6-205ENST00000550075 UBE2D3P61077 147 aa17.63■□□□□ 0.41
CPSF6-205ENST00000550075 UBE2D2P62837 147 aa17.63■□□□□ 0.41
CPSF6-205ENST00000550075 NEXN-AS1Q8NBZ9 246 aa17.63■□□□□ 0.41
CPSF6-205ENST00000550075 A0A1B0GVY2 172 aa17.62■□□□□ 0.41
CPSF6-205ENST00000550075 SRSF3P84103 164 aaKnown RBP17.62■□□□□ 0.41
CPSF6-205ENST00000550075 SMIM15Q7Z3B0 74 aa17.62■□□□□ 0.41
CPSF6-205ENST00000550075 GTSF1Q8WW33 167 aa17.62■□□□□ 0.41
CPSF6-205ENST00000550075 BORCS7Q96B45 105 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms