RNA–Protein interactions for RNA: ENST00000549362.1

USP25-210, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 2

Gene USP25, Length 606 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-210ENST00000549362 NDUFA4O00483 81 aa3.25□□□□□ -1.89
USP25-210ENST00000549362 CCL21O00585 134 aa3.25□□□□□ -1.89
USP25-210ENST00000549362 IGHV3-23P01764 117 aa3.25□□□□□ -1.89
USP25-210ENST00000549362 FXYD2P54710 66 aa3.25□□□□□ -1.89
USP25-210ENST00000549362 RPL32P62910 135 aaKnown RBP3.25□□□□□ -1.89
USP25-210ENST00000549362 NDPQ00604 133 aa3.25□□□□□ -1.89
USP25-210ENST00000549362 ERCC8Q13216 396 aa3.25□□□□□ -1.89
USP25-210ENST00000549362 KLRD1Q13241 179 aa3.25□□□□□ -1.89
USP25-210ENST00000549362 RRN3P1Q2M238 152 aa3.25□□□□□ -1.89
USP25-210ENST00000549362 C12orf74Q32Q52 190 aa3.25□□□□□ -1.89
USP25-210ENST00000549362 LRRC75A-AS1Q8N1F1 130 aa3.25□□□□□ -1.89
USP25-210ENST00000549362 ATP6V0E2Q8NHE4 81 aa3.25□□□□□ -1.89
USP25-210ENST00000549362 LINC01560Q8TB33 94 aa3.25□□□□□ -1.89
USP25-210ENST00000549362 TOMM6Q96B49 74 aa3.25□□□□□ -1.89
USP25-210ENST00000549362 TMEM141Q96I45 108 aa3.25□□□□□ -1.89
USP25-210ENST00000549362 USMG5Q96IX5 58 aa3.25□□□□□ -1.89
USP25-210ENST00000549362 AGPAT4-IT1Q9H0P7 198 aa3.25□□□□□ -1.89
USP25-210ENST00000549362 MRPL35Q9NZE8 188 aaKnown RBP3.25□□□□□ -1.89
USP25-210ENST00000549362 TP73-AS1Q9UF72 201 aa3.25□□□□□ -1.89
USP25-210ENST00000549362 MOB4Q9Y3A3 225 aa3.25□□□□□ -1.89
USP25-210ENST00000549362 PHLDA3Q9Y5J5 127 aa3.25□□□□□ -1.89
USP25-210ENST00000549362 S4R3C0 116 aa3.25□□□□□ -1.89
USP25-210ENST00000549362 CELSR3Q9NYQ7 3312 aa3.24□□□□□ -1.89
USP25-210ENST00000549362 NCOR1O75376 2440 aa3.24□□□□□ -1.89
USP25-210ENST00000549362 NBEAQ8NFP9 2946 aa3.24□□□□□ -1.89
USP25-210ENST00000549362 TRBV20-1A0A075B6N2 111 aa3.24□□□□□ -1.89
USP25-210ENST00000549362 IGKV3D-20A0A0C4DH25 116 aa3.24□□□□□ -1.89
USP25-210ENST00000549362 IGHV7-4-1A0A0J9YVY3 117 aa3.24□□□□□ -1.89
USP25-210ENST00000549362 A0A1B0GWB2 263 aa3.24□□□□□ -1.89
USP25-210ENST00000549362 BRI3O95415 125 aa3.24□□□□□ -1.89
USP25-210ENST00000549362 IGHG4P01861 327 aa3.24□□□□□ -1.89
USP25-210ENST00000549362 HLA-DMBP28068 263 aa3.24□□□□□ -1.89
USP25-210ENST00000549362 CRIP2P52943 208 aaPredicted RBP3.24□□□□□ -1.89
USP25-210ENST00000549362 DLX1P56177 255 aa3.24□□□□□ -1.89
USP25-210ENST00000549362 RIPPLY3P57055 190 aa3.24□□□□□ -1.89
USP25-210ENST00000549362 FXYD7P58549 80 aa3.24□□□□□ -1.89
USP25-210ENST00000549362 KLRB1Q12918 225 aa3.24□□□□□ -1.89
USP25-210ENST00000549362 ADAMTSL4-AS1Q5T5F5 129 aa3.24□□□□□ -1.89
USP25-210ENST00000549362 C11orf71Q6IPW1 123 aa3.24□□□□□ -1.89
USP25-210ENST00000549362 CLEC19AQ6UXS0 136 aa3.24□□□□□ -1.89
USP25-210ENST00000549362 SCGB1D4Q6XE38 83 aa3.24□□□□□ -1.89
USP25-210ENST00000549362 C18orf65Q6ZTR6 163 aa3.24□□□□□ -1.89
USP25-210ENST00000549362 DLX4Q92988 240 aaPredicted RBP3.24□□□□□ -1.89
USP25-210ENST00000549362 DUX3Q96PT4 197 aa3.24□□□□□ -1.89
USP25-210ENST00000549362 KIR2DL4Q99706 377 aa3.24□□□□□ -1.89
USP25-210ENST00000549362 CYSLTR1Q9Y271 337 aa3.24□□□□□ -1.89
USP25-210ENST00000549362 PYGO1Q9Y3Y4 419 aa3.24□□□□□ -1.89
USP25-210ENST00000549362 DSPP15924 2871 aaKnown RBP3.23□□□□□ -1.89
USP25-210ENST00000549362 TRBV7-3A0A075B6L6 115 aa3.23□□□□□ -1.89
USP25-210ENST00000549362 IGKV2D-26A0A0A0MRZ7 120 aa3.23□□□□□ -1.89
USP25-210ENST00000549362 TRAV41A0A0B4J266 112 aa3.23□□□□□ -1.89
USP25-210ENST00000549362 TEX48A0A1B0GUV7 120 aa3.23□□□□□ -1.89
USP25-210ENST00000549362 ZNF815PA8K554 130 aa3.23□□□□□ -1.89
USP25-210ENST00000549362 TMEM262E9PQX1 116 aa3.23□□□□□ -1.89
USP25-210ENST00000549362 H3BVH4 76 aa3.23□□□□□ -1.89
USP25-210ENST00000549362 K7EQD1 137 aa3.23□□□□□ -1.89
USP25-210ENST00000549362 NPFFO15130 113 aa3.23□□□□□ -1.89
USP25-210ENST00000549362 TRGV3P03979 118 aa3.23□□□□□ -1.89
USP25-210ENST00000549362 NBL1P41271 181 aa3.23□□□□□ -1.89
USP25-210ENST00000549362 EFNA4P52798 201 aa3.23□□□□□ -1.89
USP25-210ENST00000549362 PRB3Q04118 309 aaPredicted RBP3.23□□□□□ -1.89
USP25-210ENST00000549362 C2orf66Q6UXQ4 117 aa3.23□□□□□ -1.89
USP25-210ENST00000549362 RNF182Q8N6D2 247 aa3.23□□□□□ -1.89
USP25-210ENST00000549362 TIMM17AQ99595 171 aa3.23□□□□□ -1.89
USP25-210ENST00000549362 NAA38Q9BRA0 125 aaKnown RBP3.23□□□□□ -1.89
USP25-210ENST00000549362 OVOL2Q9BRP0 275 aa3.23□□□□□ -1.89
USP25-210ENST00000549362 SPANXB1Q9NS25 103 aaPredicted RBP3.23□□□□□ -1.89
USP25-210ENST00000549362 MRPL16Q9NX20 251 aaKnown RBP3.23□□□□□ -1.89
USP25-210ENST00000549362 ABCA1O95477 2261 aa3.23□□□□□ -1.89
USP25-210ENST00000549362 ZNF318Q5VUA4 2279 aa3.22□□□□□ -1.89
USP25-210ENST00000549362 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.22□□□□□ -1.89
USP25-210ENST00000549362 TRAV8-2A0A0B4J237 113 aa3.22□□□□□ -1.89
USP25-210ENST00000549362 IGHV3-35A0A0C4DH35 117 aa3.22□□□□□ -1.89
USP25-210ENST00000549362 CLPSL1A2RUU4 121 aa3.22□□□□□ -1.89
USP25-210ENST00000549362 H3BMG7 143 aa3.22□□□□□ -1.89
USP25-210ENST00000549362 APOMO95445 188 aa3.22□□□□□ -1.89
USP25-210ENST00000549362 MGPP08493 103 aa3.22□□□□□ -1.89
USP25-210ENST00000549362 GATA1P15976 413 aaPredicted RBP3.22□□□□□ -1.89
USP25-210ENST00000549362 LGALS3P17931 250 aaKnown RBP3.22□□□□□ -1.89
USP25-210ENST00000549362 SAA4P35542 130 aa3.22□□□□□ -1.89
USP25-210ENST00000549362 PMVKQ15126 192 aa3.22□□□□□ -1.89
USP25-210ENST00000549362 TCTEX1D4Q5JR98 221 aa3.22□□□□□ -1.89
USP25-210ENST00000549362 Q6ZRP5 223 aa3.22□□□□□ -1.89
USP25-210ENST00000549362 APRG1Q8IVJ8 170 aa3.22□□□□□ -1.89
USP25-210ENST00000549362 POM121L12Q8N7R1 296 aa3.22□□□□□ -1.89
USP25-210ENST00000549362 C5orf56Q8N8D9 126 aa3.22□□□□□ -1.89
USP25-210ENST00000549362 ITLN2Q8WWU7 325 aaPredicted RBP3.22□□□□□ -1.89
USP25-210ENST00000549362 BAALCQ8WXS3 180 aa3.22□□□□□ -1.89
USP25-210ENST00000549362 ODF3Q96PU9 254 aa3.22□□□□□ -1.89
USP25-210ENST00000549362 PRADC1Q9BSG0 188 aa3.22□□□□□ -1.89
USP25-210ENST00000549362 ZNF580Q9UK33 172 aa3.22□□□□□ -1.89
USP25-210ENST00000549362 COL6A3P12111 3177 aa3.22□□□□□ -1.89
USP25-210ENST00000549362 RP1L1Q8IWN7 2480 aaPredicted RBP3.21□□□□□ -1.89
USP25-210ENST00000549362 PKDREJQ9NTG1 2253 aa3.21□□□□□ -1.9
USP25-210ENST00000549362 IGLV7-46A0A075B6I9 117 aa3.21□□□□□ -1.9
USP25-210ENST00000549362 TRAV26-2A0A0B4J265 109 aa3.21□□□□□ -1.9
USP25-210ENST00000549362 IGHV3-66A0A0C4DH42 116 aa3.21□□□□□ -1.9
USP25-210ENST00000549362 C11orf86A6NJI1 115 aa3.21□□□□□ -1.9
USP25-210ENST00000549362 A8MWV9 139 aa3.21□□□□□ -1.9
USP25-210ENST00000549362 K7EMT4 169 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms