RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 CDK6Q00534 326 aa0.14□□□□□ -2.39
CCDC38-206ENST00000548771 ITGB3BPQ13352 177 aaPredicted RBP0.14□□□□□ -2.39
CCDC38-206ENST00000548771 RRN3P1Q2M238 152 aa0.14□□□□□ -2.39
CCDC38-206ENST00000548771 TMEM97Q5BJF2 176 aa0.14□□□□□ -2.39
CCDC38-206ENST00000548771 BCL2L15Q5TBC7 163 aa0.14□□□□□ -2.39
CCDC38-206ENST00000548771 C22orf39Q6P5X5 142 aa0.14□□□□□ -2.39
CCDC38-206ENST00000548771 GNPDA2Q8TDQ7 276 aa0.14□□□□□ -2.39
CCDC38-206ENST00000548771 TSKUQ8WUA8 353 aa0.14□□□□□ -2.39
CCDC38-206ENST00000548771 WFDC10AQ9H1F0 79 aa0.14□□□□□ -2.39
CCDC38-206ENST00000548771 PDCD11Q14690 1871 aaKnown RBP0.14□□□□□ -2.39
CCDC38-206ENST00000548771 MYO18AQ92614 2054 aaKnown RBP0.14□□□□□ -2.39
CCDC38-206ENST00000548771 DNAJC13O75165 2243 aa0.13□□□□□ -2.39
CCDC38-206ENST00000548771 TRAV23DV6A0A075B6W5 121 aa0.13□□□□□ -2.39
CCDC38-206ENST00000548771 TNFSF15O95150 251 aa0.13□□□□□ -2.39
CCDC38-206ENST00000548771 TCRBP04435 133 aa0.13□□□□□ -2.39
CCDC38-206ENST00000548771 COX7CP15954 63 aa0.13□□□□□ -2.39
CCDC38-206ENST00000548771 SPRR2EP22531 72 aa0.13□□□□□ -2.39
CCDC38-206ENST00000548771 CD52P31358 61 aa0.13□□□□□ -2.39
CCDC38-206ENST00000548771 SPRR2BP35325 72 aa0.13□□□□□ -2.39
CCDC38-206ENST00000548771 SPRR2AP35326 72 aa0.13□□□□□ -2.39
CCDC38-206ENST00000548771 SERPINB9P50453 376 aa0.13□□□□□ -2.39
CCDC38-206ENST00000548771 ROMO1P60602 79 aa0.13□□□□□ -2.39
CCDC38-206ENST00000548771 HAMPP81172 84 aa0.13□□□□□ -2.39
CCDC38-206ENST00000548771 DEFB109BQ30KR1 87 aa0.13□□□□□ -2.39
CCDC38-206ENST00000548771 SPATA45Q537H7 98 aa0.13□□□□□ -2.39
CCDC38-206ENST00000548771 C6orf52Q5T4I8 152 aa0.13□□□□□ -2.39
CCDC38-206ENST00000548771 Q5VSD8 79 aa0.13□□□□□ -2.39
CCDC38-206ENST00000548771 FKBP1CQ5VVH2 108 aa0.13□□□□□ -2.39
CCDC38-206ENST00000548771 PPTC7Q8NI37 304 aa0.13□□□□□ -2.39
CCDC38-206ENST00000548771 PPP1R14BQ96C90 147 aa0.13□□□□□ -2.39
CCDC38-206ENST00000548771 ARL5BQ96KC2 179 aa0.13□□□□□ -2.39
CCDC38-206ENST00000548771 LYSMD1Q96S90 227 aa0.13□□□□□ -2.39
CCDC38-206ENST00000548771 NABP2Q9BQ15 211 aa0.13□□□□□ -2.39
CCDC38-206ENST00000548771 KIFC1Q9BW19 673 aa0.13□□□□□ -2.39
CCDC38-206ENST00000548771 PLXNA2O75051 1894 aa0.13□□□□□ -2.39
CCDC38-206ENST00000548771 ANK1P16157 1881 aa0.13□□□□□ -2.39
CCDC38-206ENST00000548771 UNC13CQ8NB66 2214 aa0.13□□□□□ -2.39
CCDC38-206ENST00000548771 MYH7BA7E2Y1 1941 aa0.13□□□□□ -2.39
CCDC38-206ENST00000548771 NUP210LQ5VU65 1888 aa0.12□□□□□ -2.39
CCDC38-206ENST00000548771 NUPR2A6NF83 97 aa0.12□□□□□ -2.39
CCDC38-206ENST00000548771 C17orf112F2Z3M2 114 aa0.12□□□□□ -2.39
CCDC38-206ENST00000548771 M0R233 179 aa0.12□□□□□ -2.39
CCDC38-206ENST00000548771 PPYP01298 95 aa0.12□□□□□ -2.39
CCDC38-206ENST00000548771 SMR3BP02814 79 aaPredicted RBP0.12□□□□□ -2.39
CCDC38-206ENST00000548771 CXCL8P10145 99 aa0.12□□□□□ -2.39
CCDC38-206ENST00000548771 CCL4P13236 92 aa0.12□□□□□ -2.39
CCDC38-206ENST00000548771 SPRR2DP22532 72 aa0.12□□□□□ -2.39
CCDC38-206ENST00000548771 ZNF137PP52743 207 aa0.12□□□□□ -2.39
CCDC38-206ENST00000548771 LSM6P62312 80 aaKnown RBP0.12□□□□□ -2.39
CCDC38-206ENST00000548771 SPA17Q15506 151 aa0.12□□□□□ -2.39
CCDC38-206ENST00000548771 EIF5AL1Q6IS14 154 aaKnown RBP0.12□□□□□ -2.39
CCDC38-206ENST00000548771 Q6ZS92 163 aa0.12□□□□□ -2.39
CCDC38-206ENST00000548771 OTUD6BQ8N6M0 293 aa0.12□□□□□ -2.39
CCDC38-206ENST00000548771 TSTD1Q8NFU3 115 aa0.12□□□□□ -2.39
CCDC38-206ENST00000548771 FDCSPQ8NFU4 85 aa0.12□□□□□ -2.39
CCDC38-206ENST00000548771 Q8TAT8 98 aa0.12□□□□□ -2.39
CCDC38-206ENST00000548771 BTF3L4Q96K17 158 aa0.12□□□□□ -2.39
CCDC38-206ENST00000548771 SIGMAR1Q99720 223 aa0.12□□□□□ -2.39
CCDC38-206ENST00000548771 PBOV1Q9GZY1 135 aa0.12□□□□□ -2.39
CCDC38-206ENST00000548771 MYH9P35579 1960 aaKnown RBP0.12□□□□□ -2.39
CCDC38-206ENST00000548771 MYH8P13535 1937 aa0.11□□□□□ -2.39
CCDC38-206ENST00000548771 TRAV4A0A0B4J268 109 aa0.11□□□□□ -2.39
CCDC38-206ENST00000548771 JMJD7-PLA2G4BH0Y9G9 81 aa0.11□□□□□ -2.39
CCDC38-206ENST00000548771 TAX1BP3O14907 124 aa0.11□□□□□ -2.39
CCDC38-206ENST00000548771 OR7C1O76099 320 aaPredicted RBP0.11□□□□□ -2.39
CCDC38-206ENST00000548771 LY6G6CO95867 125 aa0.11□□□□□ -2.39
CCDC38-206ENST00000548771 HAND1O96004 215 aa0.11□□□□□ -2.39
CCDC38-206ENST00000548771 STATHP02808 62 aa0.11□□□□□ -2.39
CCDC38-206ENST00000548771 MT1FP04733 61 aa0.11□□□□□ -2.39
CCDC38-206ENST00000548771 SPINT3P49223 89 aa0.11□□□□□ -2.39
CCDC38-206ENST00000548771 UBE2BP63146 152 aa0.11□□□□□ -2.39
CCDC38-206ENST00000548771 KRTAP20-2Q3LI61 65 aa0.11□□□□□ -2.39
CCDC38-206ENST00000548771 C1orf134Q5TEV5 83 aa0.11□□□□□ -2.39
CCDC38-206ENST00000548771 OR8J2Q8NGG1 315 aa0.11□□□□□ -2.39
CCDC38-206ENST00000548771 RAB37Q96AX2 223 aa0.11□□□□□ -2.39
CCDC38-206ENST00000548771 MUCL1Q96DR8 90 aa0.11□□□□□ -2.39
CCDC38-206ENST00000548771 RMND5BQ96G75 393 aaPredicted RBP0.11□□□□□ -2.39
CCDC38-206ENST00000548771 ZC2HC1AQ96GY0 325 aa0.11□□□□□ -2.39
CCDC38-206ENST00000548771 GGACTQ9BVM4 153 aa0.11□□□□□ -2.39
CCDC38-206ENST00000548771 NPCDR1Q9BY65 106 aa0.11□□□□□ -2.39
CCDC38-206ENST00000548771 IMUPQ9GZP8 106 aa0.11□□□□□ -2.39
CCDC38-206ENST00000548771 TCEAL2Q9H3H9 227 aaPredicted RBP0.11□□□□□ -2.39
CCDC38-206ENST00000548771 JPT1Q9UK76 154 aa0.11□□□□□ -2.39
CCDC38-206ENST00000548771 Q9Y3F1 56 aa0.11□□□□□ -2.39
CCDC38-206ENST00000548771 MYH2Q9UKX2 1941 aa0.11□□□□□ -2.39
CCDC38-206ENST00000548771 FREM3P0C091 2139 aa0.1□□□□□ -2.39
CCDC38-206ENST00000548771 NUP210Q8TEM1 1887 aaPredicted RBP0.1□□□□□ -2.39
CCDC38-206ENST00000548771 TRBV19A0A075B6N1 114 aa0.1□□□□□ -2.39
CCDC38-206ENST00000548771 TRBV30A0A0K0K1B3 111 aa0.1□□□□□ -2.39
CCDC38-206ENST00000548771 DEFB108AA8MXU0 73 aa0.1□□□□□ -2.39
CCDC38-206ENST00000548771 B4DSR2 109 aa0.1□□□□□ -2.39
CCDC38-206ENST00000548771 OR10J4P0C629 311 aa0.1□□□□□ -2.39
CCDC38-206ENST00000548771 ATP5G3P48201 142 aa0.1□□□□□ -2.39
CCDC38-206ENST00000548771 FOXA3P55318 350 aaPredicted RBP0.1□□□□□ -2.39
CCDC38-206ENST00000548771 UBA52P62987 128 aaKnown RBP0.1□□□□□ -2.39
CCDC38-206ENST00000548771 CCL7P80098 99 aa0.1□□□□□ -2.39
CCDC38-206ENST00000548771 GLIPR1L1Q6UWM5 242 aa0.1□□□□□ -2.39
CCDC38-206ENST00000548771 ATOH7Q8N100 152 aa0.1□□□□□ -2.39
CCDC38-206ENST00000548771 SPRR2FQ96RM1 72 aa0.1□□□□□ -2.39
CCDC38-206ENST00000548771 NMNAT1Q9HAN9 279 aaPredicted RBP0.1□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms