RNA–Protein interactions for RNA: ENST00000546073.5

CD9-211, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-211ENST00000546073 OSTCQ9NRP0 149 aa12.17□□□□□ -0.46
CD9-211ENST00000546073 RAB4BP61018 213 aa12.16□□□□□ -0.46
CD9-211ENST00000546073 TWIST1Q15672 202 aa12.16□□□□□ -0.46
CD9-211ENST00000546073 LYZL1Q6UWQ5 148 aa12.16□□□□□ -0.46
CD9-211ENST00000546073 JPT2Q9H910 190 aa12.16□□□□□ -0.46
CD9-211ENST00000546073 H7C1H1 209 aa12.15□□□□□ -0.46
CD9-211ENST00000546073 IGLC6P0CF74 106 aa12.15□□□□□ -0.46
CD9-211ENST00000546073 RPL36AP83881 106 aaKnown RBP12.15□□□□□ -0.46
CD9-211ENST00000546073 ESRGQ1W209 222 aa12.15□□□□□ -0.46
CD9-211ENST00000546073 C14orf178Q8N769 122 aaPredicted RBP12.15□□□□□ -0.46
CD9-211ENST00000546073 OR10G8Q8NGN5 311 aa12.15□□□□□ -0.46
CD9-211ENST00000546073 RPL36ALQ969Q0 106 aaKnown RBP12.15□□□□□ -0.46
CD9-211ENST00000546073 LINC00588Q9Y4M8 146 aa12.15□□□□□ -0.46
CD9-211ENST00000546073 TRAV9-2A0A087WT02 112 aa12.14□□□□□ -0.47
CD9-211ENST00000546073 NXPH4O95158 308 aa12.14□□□□□ -0.47
CD9-211ENST00000546073 MGPP08493 103 aa12.14□□□□□ -0.47
CD9-211ENST00000546073 SRSF3P84103 164 aaKnown RBP12.14□□□□□ -0.47
CD9-211ENST00000546073 TTC32Q5I0X7 151 aa12.14□□□□□ -0.47
CD9-211ENST00000546073 UQCC3Q6UW78 93 aa12.14□□□□□ -0.47
CD9-211ENST00000546073 ATP6V0E2Q8NHE4 81 aa12.14□□□□□ -0.47
CD9-211ENST00000546073 SAMD10Q9BYL1 202 aa12.14□□□□□ -0.47
CD9-211ENST00000546073 Q9H8V8 135 aa12.14□□□□□ -0.47
CD9-211ENST00000546073 MRPS16Q9Y3D3 137 aaKnown RBP12.14□□□□□ -0.47
CD9-211ENST00000546073 TRAV8-6A0A0B4J262 113 aa12.13□□□□□ -0.47
CD9-211ENST00000546073 TRBV10-1A0A0K0K1A3 114 aa12.13□□□□□ -0.47
CD9-211ENST00000546073 FAM231BA6NCW3 169 aa12.13□□□□□ -0.47
CD9-211ENST00000546073 GAGE12JA6NER3 117 aa12.13□□□□□ -0.47
CD9-211ENST00000546073 CRYGDP07320 174 aa12.13□□□□□ -0.47
CD9-211ENST00000546073 NTF3P20783 257 aa12.13□□□□□ -0.47
CD9-211ENST00000546073 RPL23P62829 140 aaKnown RBP12.13□□□□□ -0.47
CD9-211ENST00000546073 GAGE1Q13065 139 aa12.13□□□□□ -0.47
CD9-211ENST00000546073 GAGE4Q13068 117 aa12.13□□□□□ -0.47
CD9-211ENST00000546073 GAGE5Q13069 117 aa12.13□□□□□ -0.47
CD9-211ENST00000546073 GAGE13Q4V321 117 aa12.13□□□□□ -0.47
CD9-211ENST00000546073 LYPD5Q6UWN5 251 aa12.13□□□□□ -0.47
CD9-211ENST00000546073 TSKUQ8WUA8 353 aa12.13□□□□□ -0.47
CD9-211ENST00000546073 GFRA4Q9GZZ7 299 aa12.13□□□□□ -0.47
CD9-211ENST00000546073 IGLV2-18A0A075B6J9 118 aa12.12□□□□□ -0.47
CD9-211ENST00000546073 PNRC1Q12796 327 aaPredicted RBP12.12□□□□□ -0.47
CD9-211ENST00000546073 ISOC2Q96AB3 205 aa12.12□□□□□ -0.47
CD9-211ENST00000546073 PGLYRP4Q96LB8 373 aa12.12□□□□□ -0.47
CD9-211ENST00000546073 CSMD3Q7Z407 3707 aa12.12□□□□□ -0.47
CD9-211ENST00000546073 STARD9Q9P2P6 4700 aa12.11□□□□□ -0.47
CD9-211ENST00000546073 MUC4Q99102 2169 aa12.11□□□□□ -0.47
CD9-211ENST00000546073 C9JQL5 133 aa12.11□□□□□ -0.47
CD9-211ENST00000546073 M0R2N4 97 aa12.11□□□□□ -0.47
CD9-211ENST00000546073 PPP1R2P9O14990 202 aa12.11□□□□□ -0.47
CD9-211ENST00000546073 CTRLP40313 264 aa12.11□□□□□ -0.47
CD9-211ENST00000546073 ZNF575Q86XF7 245 aa12.11□□□□□ -0.47
CD9-211ENST00000546073 UPK3BQ9BT76 320 aa12.11□□□□□ -0.47
CD9-211ENST00000546073 DPH3P1Q9H4G8 78 aa12.11□□□□□ -0.47
CD9-211ENST00000546073 A0A087WWC5 75 aa12.1□□□□□ -0.47
CD9-211ENST00000546073 LOC100131303A0A0U1RQF7 123 aa12.1□□□□□ -0.47
CD9-211ENST00000546073 SIVA1O15304 175 aa12.1□□□□□ -0.47
CD9-211ENST00000546073 IFITM2Q01629 132 aa12.1□□□□□ -0.47
CD9-211ENST00000546073 OR10J3Q5JRS4 329 aa12.1□□□□□ -0.47
CD9-211ENST00000546073 KCNIP4Q6PIL6 250 aa12.1□□□□□ -0.47
CD9-211ENST00000546073 GTSF1LQ9H1H1 148 aa12.1□□□□□ -0.47
CD9-211ENST00000546073 NAT8BQ9UHF3 227 aa12.1□□□□□ -0.47
CD9-211ENST00000546073 A0A1B0GUT8 65 aa12.09□□□□□ -0.47
CD9-211ENST00000546073 HIGD1CA8MV81 97 aa12.09□□□□□ -0.47
CD9-211ENST00000546073 EVI2AP22794 236 aa12.09□□□□□ -0.47
CD9-211ENST00000546073 TIRAPP58753 221 aa12.09□□□□□ -0.47
CD9-211ENST00000546073 RIGQ13278 110 aa12.09□□□□□ -0.47
CD9-211ENST00000546073 UFSP1Q6NVU6 142 aa12.09□□□□□ -0.47
CD9-211ENST00000546073 ZNRF2Q8NHG8 242 aa12.09□□□□□ -0.47
CD9-211ENST00000546073 TNFRSF18Q9Y5U5 241 aa12.09□□□□□ -0.47
CD9-211ENST00000546073 TRBV7-3A0A075B6L6 115 aa12.08□□□□□ -0.48
CD9-211ENST00000546073 MT-ND4LP03901 98 aa12.08□□□□□ -0.48
CD9-211ENST00000546073 NBDYA0A0U1RRE5 68 aa12.07□□□□□ -0.48
CD9-211ENST00000546073 F8W036 122 aa12.07□□□□□ -0.48
CD9-211ENST00000546073 K7EP13 123 aa12.07□□□□□ -0.48
CD9-211ENST00000546073 FOXA3P55318 350 aaPredicted RBP12.07□□□□□ -0.48
CD9-211ENST00000546073 Q6ZSN1 163 aa12.07□□□□□ -0.48
CD9-211ENST00000546073 CNFNQ9BYD5 112 aa12.07□□□□□ -0.48
CD9-211ENST00000546073 S100A8P05109 93 aa12.06□□□□□ -0.48
CD9-211ENST00000546073 TMEM97Q5BJF2 176 aa12.06□□□□□ -0.48
CD9-211ENST00000546073 LELP1Q5T871 98 aa12.06□□□□□ -0.48
CD9-211ENST00000546073 COMMD7Q86VX2 200 aa12.06□□□□□ -0.48
CD9-211ENST00000546073 GTSF1Q8WW33 167 aa12.06□□□□□ -0.48
CD9-211ENST00000546073 DNAJC30Q96LL9 226 aa12.06□□□□□ -0.48
CD9-211ENST00000546073 MSRB1Q9NZV6 116 aa12.06□□□□□ -0.48
CD9-211ENST00000546073 URGCP-MRPS24S4R325 110 aa12.06□□□□□ -0.48
CD9-211ENST00000546073 V9GYV3 84 aa12.06□□□□□ -0.48
CD9-211ENST00000546073 C1orf134Q5TEV5 83 aa12.05□□□□□ -0.48
CD9-211ENST00000546073 RASL11AQ6T310 242 aa12.04□□□□□ -0.48
CD9-211ENST00000546073 C10orf126Q8N4M7 172 aa12.04□□□□□ -0.48
CD9-211ENST00000546073 ANAPC16Q96DE5 110 aa12.04□□□□□ -0.48
CD9-211ENST00000546073 A0A1B0GW15 77 aa12.03□□□□□ -0.48
CD9-211ENST00000546073 DAZ4Q86SG3 579 aaKnown RBP12.03□□□□□ -0.48
CD9-211ENST00000546073 DAZ3Q9NR90 486 aaKnown RBP12.03□□□□□ -0.48
CD9-211ENST00000546073 IGHV3-38A0A0C4DH36 116 aa12.02□□□□□ -0.49
CD9-211ENST00000546073 TMEM218A2RU14 115 aa12.02□□□□□ -0.49
CD9-211ENST00000546073 BTF3P20290 206 aaKnown RBP12.02□□□□□ -0.49
CD9-211ENST00000546073 PKIAP61925 76 aa12.02□□□□□ -0.49
CD9-211ENST00000546073 LINC00336Q6ZUF6 198 aa12.02□□□□□ -0.49
CD9-211ENST00000546073 FRZBQ92765 325 aa12.02□□□□□ -0.49
CD9-211ENST00000546073 KIF25-AS1Q9Y6Z4 181 aa12.02□□□□□ -0.49
CD9-211ENST00000546073 SUMO4Q6EEV6 95 aa12.01□□□□□ -0.49
CD9-211ENST00000546073 NEXN-AS1Q8NBZ9 246 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms