RNA–Protein interactions for RNA: ENST00000544622.4

YBX3-216, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-216ENST00000544622 LINC00315P59091 139 aa7.75□□□□□ -1.17
YBX3-216ENST00000544622 CENPWQ5EE01 88 aa7.75□□□□□ -1.17
YBX3-216ENST00000544622 ALKAL2Q6UX46 152 aa7.75□□□□□ -1.17
YBX3-216ENST00000544622 SYT8Q8NBV8 401 aa7.75□□□□□ -1.17
YBX3-216ENST00000544622 APOBP04114 4563 aaKnown RBP7.74□□□□□ -1.17
YBX3-216ENST00000544622 M0R381 172 aa7.74□□□□□ -1.17
YBX3-216ENST00000544622 RHODO00212 210 aa7.74□□□□□ -1.17
YBX3-216ENST00000544622 IFNA1P01562 189 aa7.74□□□□□ -1.17
YBX3-216ENST00000544622 NKX2-5P52952 324 aaPredicted RBP7.74□□□□□ -1.17
YBX3-216ENST00000544622 ZFP82Q8N141 532 aa7.74□□□□□ -1.17
YBX3-216ENST00000544622 C14orf178Q8N769 122 aaPredicted RBP7.74□□□□□ -1.17
YBX3-216ENST00000544622 LY96Q9Y6Y9 160 aa7.74□□□□□ -1.17
YBX3-216ENST00000544622 GNG4P50150 75 aa7.73□□□□□ -1.17
YBX3-216ENST00000544622 BLOC1S1P78537 153 aa7.73□□□□□ -1.17
YBX3-216ENST00000544622 PRR27Q6MZM9 219 aa7.73□□□□□ -1.17
YBX3-216ENST00000544622 OR10AG1Q8NH19 301 aa7.73□□□□□ -1.17
YBX3-216ENST00000544622 ATP6V0E2Q8NHE4 81 aa7.73□□□□□ -1.17
YBX3-216ENST00000544622 GTSF1LQ9H1H1 148 aa7.73□□□□□ -1.17
YBX3-216ENST00000544622 MED9Q9NWA0 146 aa7.73□□□□□ -1.17
YBX3-216ENST00000544622 TNFRSF18Q9Y5U5 241 aa7.73□□□□□ -1.17
YBX3-216ENST00000544622 TRAV9-2A0A087WT02 112 aa7.72□□□□□ -1.17
YBX3-216ENST00000544622 A0A087WWL8 130 aa7.72□□□□□ -1.17
YBX3-216ENST00000544622 IGHV3-38A0A0C4DH36 116 aa7.72□□□□□ -1.17
YBX3-216ENST00000544622 IGLC6P0CF74 106 aa7.72□□□□□ -1.17
YBX3-216ENST00000544622 LINC01556Q5JQF7 62 aa7.72□□□□□ -1.17
YBX3-216ENST00000544622 LELP1Q5T871 98 aa7.72□□□□□ -1.17
YBX3-216ENST00000544622 KRTAP3-3Q9BYR6 98 aa7.72□□□□□ -1.17
YBX3-216ENST00000544622 KRTAP3-2Q9BYR7 98 aa7.72□□□□□ -1.17
YBX3-216ENST00000544622 KIF25-AS1Q9Y6Z4 181 aa7.72□□□□□ -1.17
YBX3-216ENST00000544622 HSPG2P98160 4391 aa7.72□□□□□ -1.17
YBX3-216ENST00000544622 TRBV10-1A0A0K0K1A3 114 aa7.71□□□□□ -1.18
YBX3-216ENST00000544622 RBFOX3A6NFN3 312 aa7.71□□□□□ -1.18
YBX3-216ENST00000544622 EVI2AP22794 236 aa7.71□□□□□ -1.18
YBX3-216ENST00000544622 FAM74A4Q5TZK3 123 aa7.71□□□□□ -1.18
YBX3-216ENST00000544622 TRAV8-6A0A0B4J262 113 aa7.7□□□□□ -1.18
YBX3-216ENST00000544622 GAGE12JA6NER3 117 aa7.7□□□□□ -1.18
YBX3-216ENST00000544622 TMEM250H0YL14 139 aa7.7□□□□□ -1.18
YBX3-216ENST00000544622 NDUFS6O75380 124 aaKnown RBP7.7□□□□□ -1.18
YBX3-216ENST00000544622 GAGE1Q13065 139 aa7.7□□□□□ -1.18
YBX3-216ENST00000544622 GAGE4Q13068 117 aa7.7□□□□□ -1.18
YBX3-216ENST00000544622 GAGE5Q13069 117 aa7.7□□□□□ -1.18
YBX3-216ENST00000544622 GAGE13Q4V321 117 aa7.7□□□□□ -1.18
YBX3-216ENST00000544622 C10orf126Q8N4M7 172 aa7.7□□□□□ -1.18
YBX3-216ENST00000544622 OR10G8Q8NGN5 311 aa7.7□□□□□ -1.18
YBX3-216ENST00000544622 OCC1Q8TAD7 63 aa7.7□□□□□ -1.18
YBX3-216ENST00000544622 MUC21A0A0G2JKD1 596 aa7.69□□□□□ -1.18
YBX3-216ENST00000544622 MUC21A0A140T8X8 626 aa7.69□□□□□ -1.18
YBX3-216ENST00000544622 IBA57-AS1B1ANH7 110 aa7.69□□□□□ -1.18
YBX3-216ENST00000544622 K7EN84 100 aa7.69□□□□□ -1.18
YBX3-216ENST00000544622 GZMBP10144 247 aa7.69□□□□□ -1.18
YBX3-216ENST00000544622 RPS20P60866 119 aaKnown RBP7.69□□□□□ -1.18
YBX3-216ENST00000544622 RAB4BP61018 213 aa7.69□□□□□ -1.18
YBX3-216ENST00000544622 OR10J3Q5JRS4 329 aa7.69□□□□□ -1.18
YBX3-216ENST00000544622 SPANXN1Q5VSR9 72 aa7.69□□□□□ -1.18
YBX3-216ENST00000544622 NFE4Q86UQ8 179 aa7.69□□□□□ -1.18
YBX3-216ENST00000544622 NUDT10Q8NFP7 164 aa7.69□□□□□ -1.18
YBX3-216ENST00000544622 OR2D3Q8NGH3 330 aa7.69□□□□□ -1.18
YBX3-216ENST00000544622 DAZAP1Q96EP5 407 aaKnown RBP7.69□□□□□ -1.18
YBX3-216ENST00000544622 NUDT11Q96G61 164 aa7.69□□□□□ -1.18
YBX3-216ENST00000544622 BIN3Q9NQY0 253 aa7.69□□□□□ -1.18
YBX3-216ENST00000544622 MSRB1Q9NZV6 116 aa7.69□□□□□ -1.18
YBX3-216ENST00000544622 PCLOQ9Y6V0 5065 aa7.68□□□□□ -1.18
YBX3-216ENST00000544622 TRBV7-3A0A075B6L6 115 aa7.68□□□□□ -1.18
YBX3-216ENST00000544622 P01737 135 aa7.68□□□□□ -1.18
YBX3-216ENST00000544622 KRTAP10-2P60368 255 aa7.68□□□□□ -1.18
YBX3-216ENST00000544622 UBE2D3P61077 147 aa7.68□□□□□ -1.18
YBX3-216ENST00000544622 UBE2D2P62837 147 aa7.68□□□□□ -1.18
YBX3-216ENST00000544622 A0A087WWC5 75 aa7.67□□□□□ -1.18
YBX3-216ENST00000544622 F2Z2F3 143 aa7.67□□□□□ -1.18
YBX3-216ENST00000544622 SPATA12Q7Z6I5 190 aa7.67□□□□□ -1.18
YBX3-216ENST00000544622 FER1L6-AS1Q8NA97 138 aa7.67□□□□□ -1.18
YBX3-216ENST00000544622 FAM210AQ96ND0 272 aa7.67□□□□□ -1.18
YBX3-216ENST00000544622 CNFNQ9BYD5 112 aa7.67□□□□□ -1.18
YBX3-216ENST00000544622 XKRY2A2RUG3 117 aa7.66□□□□□ -1.18
YBX3-216ENST00000544622 RPL36AP83881 106 aaKnown RBP7.66□□□□□ -1.18
YBX3-216ENST00000544622 WDR73Q6P4I2 378 aa7.66□□□□□ -1.18
YBX3-216ENST00000544622 NEXN-AS1Q8NBZ9 246 aa7.66□□□□□ -1.18
YBX3-216ENST00000544622 RPL36ALQ969Q0 106 aaKnown RBP7.66□□□□□ -1.18
YBX3-216ENST00000544622 RNASE7Q9H1E1 156 aaKnown RBP7.66□□□□□ -1.18
YBX3-216ENST00000544622 ABCA13Q86UQ4 5058 aa7.65□□□□□ -1.18
YBX3-216ENST00000544622 A0A087WTM6 91 aa7.65□□□□□ -1.18
YBX3-216ENST00000544622 C16orf90A8MZG2 172 aa7.65□□□□□ -1.18
YBX3-216ENST00000544622 CTRLP40313 264 aa7.65□□□□□ -1.18
YBX3-216ENST00000544622 SSTP61278 116 aa7.65□□□□□ -1.18
YBX3-216ENST00000544622 CACNG7P62955 275 aa7.65□□□□□ -1.18
YBX3-216ENST00000544622 LAGE3Q14657 143 aa7.65□□□□□ -1.18
YBX3-216ENST00000544622 TOR2AQ5JU69 321 aa7.65□□□□□ -1.18
YBX3-216ENST00000544622 TEX261Q6UWH6 196 aa7.65□□□□□ -1.18
YBX3-216ENST00000544622 LYZL1Q6UWQ5 148 aa7.65□□□□□ -1.18
YBX3-216ENST00000544622 FAM231DQ6ZW35 169 aa7.65□□□□□ -1.18
YBX3-216ENST00000544622 Q8N3U1 123 aa7.65□□□□□ -1.18
YBX3-216ENST00000544622 AP1S3Q96PC3 154 aa7.65□□□□□ -1.18
YBX3-216ENST00000544622 RPP21Q9H633 154 aaKnown RBP7.65□□□□□ -1.18
YBX3-216ENST00000544622 LRCOL1A6NCL2 159 aa7.64□□□□□ -1.19
YBX3-216ENST00000544622 M0QY20 66 aa7.64□□□□□ -1.19
YBX3-216ENST00000544622 IGHV3-30P01768 117 aa7.64□□□□□ -1.19
YBX3-216ENST00000544622 IGHV3-33P01772 117 aa7.64□□□□□ -1.19
YBX3-216ENST00000544622 SRP19P09132 144 aaKnown RBP7.64□□□□□ -1.19
YBX3-216ENST00000544622 IGHV3-30-3P0DP02 117 aa7.64□□□□□ -1.19
YBX3-216ENST00000544622 IGHV3-30-5P0DP03 117 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms