RNA–Protein interactions for RNA: ENST00000544293.1

C2CD3-220, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2

Gene C2CD3, Length 731 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-220ENST00000544293 C1orf43Q9BWL3 253 aa5.97□□□□□ -1.45
C2CD3-220ENST00000544293 NUDT15Q9NV35 164 aa5.97□□□□□ -1.45
C2CD3-220ENST00000544293 URGCP-MRPS24S4R325 110 aa5.97□□□□□ -1.45
C2CD3-220ENST00000544293 MUC2Q02817 5179 aa5.96□□□□□ -1.45
C2CD3-220ENST00000544293 A0A0D9SG52 128 aa5.96□□□□□ -1.46
C2CD3-220ENST00000544293 SEC11BP0C7V7 166 aa5.96□□□□□ -1.46
C2CD3-220ENST00000544293 TAS2R45P59539 299 aa5.96□□□□□ -1.46
C2CD3-220ENST00000544293 ELOBQ15370 118 aa5.96□□□□□ -1.46
C2CD3-220ENST00000544293 C15orf54Q8N8G6 183 aa5.96□□□□□ -1.46
C2CD3-220ENST00000544293 OR2G3Q8NGZ4 309 aa5.96□□□□□ -1.46
C2CD3-220ENST00000544293 PRR34Q9NV39 138 aa5.96□□□□□ -1.46
C2CD3-220ENST00000544293 A0A087WWL8 130 aa5.95□□□□□ -1.46
C2CD3-220ENST00000544293 TRBV6-8A0A0A6YYG3 113 aa5.95□□□□□ -1.46
C2CD3-220ENST00000544293 TMEM262E9PQX1 116 aa5.95□□□□□ -1.46
C2CD3-220ENST00000544293 C17orf112F2Z3M2 114 aa5.95□□□□□ -1.46
C2CD3-220ENST00000544293 PHOX2AO14813 284 aa5.95□□□□□ -1.46
C2CD3-220ENST00000544293 NOL3O60936 208 aaKnown RBP5.95□□□□□ -1.46
C2CD3-220ENST00000544293 RAB2AP61019 212 aa5.95□□□□□ -1.46
C2CD3-220ENST00000544293 RPL19P84098 196 aaKnown RBP5.95□□□□□ -1.46
C2CD3-220ENST00000544293 FLI1Q01543 452 aaPredicted RBP5.95□□□□□ -1.46
C2CD3-220ENST00000544293 SMUG1Q53HV7 270 aa5.95□□□□□ -1.46
C2CD3-220ENST00000544293 FAM74A1Q5RGS3 127 aa5.95□□□□□ -1.46
C2CD3-220ENST00000544293 DNLZQ5SXM8 178 aa5.95□□□□□ -1.46
C2CD3-220ENST00000544293 PQLC2Q6ZP29 291 aa5.95□□□□□ -1.46
C2CD3-220ENST00000544293 NTM-AS1Q6ZSK4 140 aa5.95□□□□□ -1.46
C2CD3-220ENST00000544293 PRNTQ86SH4 94 aa5.95□□□□□ -1.46
C2CD3-220ENST00000544293 OR10G8Q8NGN5 311 aa5.95□□□□□ -1.46
C2CD3-220ENST00000544293 ZC2HC1AQ96GY0 325 aa5.95□□□□□ -1.46
C2CD3-220ENST00000544293 SFRP2Q96HF1 295 aa5.95□□□□□ -1.46
C2CD3-220ENST00000544293 KCNIP2Q9NS61 270 aa5.95□□□□□ -1.46
C2CD3-220ENST00000544293 IL36BQ9NZH7 164 aa5.95□□□□□ -1.46
C2CD3-220ENST00000544293 A0A0J9YXV3 536 aa5.94□□□□□ -1.46
C2CD3-220ENST00000544293 HLA-DQA1P01909 254 aa5.94□□□□□ -1.46
C2CD3-220ENST00000544293 ARMS2P0C7Q2 107 aa5.94□□□□□ -1.46
C2CD3-220ENST00000544293 CNBPP62633 177 aaKnown RBP5.94□□□□□ -1.46
C2CD3-220ENST00000544293 LRRC37A5PQ49AS3 106 aa5.94□□□□□ -1.46
C2CD3-220ENST00000544293 SPACA4Q8TDM5 124 aa5.94□□□□□ -1.46
C2CD3-220ENST00000544293 SMIM3Q9BZL3 60 aa5.94□□□□□ -1.46
C2CD3-220ENST00000544293 PLAC8Q9NZF1 115 aa5.94□□□□□ -1.46
C2CD3-220ENST00000544293 EPDR1Q9UM22 224 aa5.94□□□□□ -1.46
C2CD3-220ENST00000544293 TRBV7-3A0A075B6L6 115 aa5.93□□□□□ -1.46
C2CD3-220ENST00000544293 TRAV34A0A0B4J273 112 aa5.93□□□□□ -1.46
C2CD3-220ENST00000544293 MUC21A0A0G2JKD1 596 aa5.93□□□□□ -1.46
C2CD3-220ENST00000544293 TRBV10-1A0A0K0K1A3 114 aa5.93□□□□□ -1.46
C2CD3-220ENST00000544293 SERTM2A0A1B0GWG4 89 aa5.93□□□□□ -1.46
C2CD3-220ENST00000544293 KRBOX1C9JBD0 128 aa5.93□□□□□ -1.46
C2CD3-220ENST00000544293 H3BVH4 76 aa5.93□□□□□ -1.46
C2CD3-220ENST00000544293 STAG3L2P0CL84 134 aa5.93□□□□□ -1.46
C2CD3-220ENST00000544293 STAG3L3P0CL85 134 aa5.93□□□□□ -1.46
C2CD3-220ENST00000544293 H2BFSP57053 126 aa5.93□□□□□ -1.46
C2CD3-220ENST00000544293 SUMO1P63165 101 aaKnown RBP5.93□□□□□ -1.46
C2CD3-220ENST00000544293 FAM74A4Q5TZK3 123 aa5.93□□□□□ -1.46
C2CD3-220ENST00000544293 C5orf17Q8NAS9 161 aa5.93□□□□□ -1.46
C2CD3-220ENST00000544293 NDFIP1Q9BT67 221 aa5.93□□□□□ -1.46
C2CD3-220ENST00000544293 HSPB11Q9Y547 144 aa5.93□□□□□ -1.46
C2CD3-220ENST00000544293 GRIFINA4D1Z8 144 aa5.92□□□□□ -1.46
C2CD3-220ENST00000544293 FABP5P3A8MUU1 101 aa5.92□□□□□ -1.46
C2CD3-220ENST00000544293 RHODO00212 210 aa5.92□□□□□ -1.46
C2CD3-220ENST00000544293 ANGP03950 147 aaKnown RBP5.92□□□□□ -1.46
C2CD3-220ENST00000544293 ARL14EPLP0DKL9 152 aa5.92□□□□□ -1.46
C2CD3-220ENST00000544293 S100A4P26447 101 aaKnown RBP5.92□□□□□ -1.46
C2CD3-220ENST00000544293 SRSF9Q13242 221 aaKnown RBP eCLIP5.92□□□□□ -1.46
C2CD3-220ENST00000544293 MIAQ16674 131 aa5.92□□□□□ -1.46
C2CD3-220ENST00000544293 PRR27Q6MZM9 219 aa5.92□□□□□ -1.46
C2CD3-220ENST00000544293 NEXN-AS1Q8NBZ9 246 aa5.92□□□□□ -1.46
C2CD3-220ENST00000544293 KIF25-AS1Q9Y6Z4 181 aa5.92□□□□□ -1.46
C2CD3-220ENST00000544293 GCHFRP30047 84 aa5.91□□□□□ -1.46
C2CD3-220ENST00000544293 RBX1P62877 108 aa5.91□□□□□ -1.46
C2CD3-220ENST00000544293 SAPCD1Q5SSQ6 148 aa5.91□□□□□ -1.46
C2CD3-220ENST00000544293 CLPSL2Q6UWE3 100 aa5.91□□□□□ -1.46
C2CD3-220ENST00000544293 COX8CQ7Z4L0 72 aa5.91□□□□□ -1.46
C2CD3-220ENST00000544293 LINC00269Q8N2A0 174 aa5.91□□□□□ -1.46
C2CD3-220ENST00000544293 CLRN3Q8NCR9 226 aa5.91□□□□□ -1.46
C2CD3-220ENST00000544293 PPP1R1CQ8WVI7 109 aa5.91□□□□□ -1.46
C2CD3-220ENST00000544293 RNF185Q96GF1 192 aa5.91□□□□□ -1.46
C2CD3-220ENST00000544293 ARL2-SNX15V9GYD0 113 aa5.91□□□□□ -1.46
C2CD3-220ENST00000544293 A0A1W2PPV4 95 aa5.9□□□□□ -1.46
C2CD3-220ENST00000544293 CCDC160A6NGH7 325 aa5.9□□□□□ -1.46
C2CD3-220ENST00000544293 B4DEV8 164 aa5.9□□□□□ -1.46
C2CD3-220ENST00000544293 CRPP02741 224 aa5.9□□□□□ -1.46
C2CD3-220ENST00000544293 PRR3P79522 188 aaKnown RBP5.9□□□□□ -1.46
C2CD3-220ENST00000544293 RPL36AP83881 106 aaKnown RBP5.9□□□□□ -1.46
C2CD3-220ENST00000544293 WDR73Q6P4I2 378 aa5.9□□□□□ -1.46
C2CD3-220ENST00000544293 OR11H4Q8NGC9 324 aa5.9□□□□□ -1.46
C2CD3-220ENST00000544293 SCGB1C1Q8TD33 95 aa5.9□□□□□ -1.46
C2CD3-220ENST00000544293 RPL36ALQ969Q0 106 aaKnown RBP5.9□□□□□ -1.46
C2CD3-220ENST00000544293 RAB24Q969Q5 203 aa5.9□□□□□ -1.46
C2CD3-220ENST00000544293 GFRA4Q9GZZ7 299 aa5.9□□□□□ -1.46
C2CD3-220ENST00000544293 M0R036 132 aa5.89□□□□□ -1.47
C2CD3-220ENST00000544293 SH2D1AO60880 128 aa5.89□□□□□ -1.47
C2CD3-220ENST00000544293 MPC2O95563 127 aa5.89□□□□□ -1.47
C2CD3-220ENST00000544293 PTTG1O95997 202 aa5.89□□□□□ -1.47
C2CD3-220ENST00000544293 RPL12P30050 165 aaKnown RBP5.89□□□□□ -1.47
C2CD3-220ENST00000544293 KCNIP4Q6PIL6 250 aa5.89□□□□□ -1.47
C2CD3-220ENST00000544293 C20orf203Q8NBC4 194 aa5.89□□□□□ -1.47
C2CD3-220ENST00000544293 HSD17B11Q8NBQ5 300 aa5.89□□□□□ -1.47
C2CD3-220ENST00000544293 DPH3Q96FX2 82 aa5.89□□□□□ -1.47
C2CD3-220ENST00000544293 IGLV10-54A0A075B6I4 117 aa5.88□□□□□ -1.47
C2CD3-220ENST00000544293 IGHV3-64A0A075B6Q5 118 aa5.88□□□□□ -1.47
C2CD3-220ENST00000544293 hDV102S1A0JD36 115 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms