RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 ADIRFQ15847 76 aa10.46□□□□□ -0.73
CD9-210ENST00000543916 FAM74A4Q5TZK3 123 aa10.46□□□□□ -0.73
CD9-210ENST00000543916 UBE2DNLQ8IWF7 75 aa10.46□□□□□ -0.73
CD9-210ENST00000543916 OSTCQ9NRP0 149 aa10.46□□□□□ -0.73
CD9-210ENST00000543916 TRBV6-4A0A1B0GX49 114 aa10.45□□□□□ -0.74
CD9-210ENST00000543916 A0A1W2PPQ1 181 aa10.45□□□□□ -0.74
CD9-210ENST00000543916 K7EQD1 137 aa10.45□□□□□ -0.74
CD9-210ENST00000543916 RHODO00212 210 aa10.45□□□□□ -0.74
CD9-210ENST00000543916 CTRLP40313 264 aa10.45□□□□□ -0.74
CD9-210ENST00000543916 RNF212Q495C1 297 aa10.45□□□□□ -0.74
CD9-210ENST00000543916 GTSF1Q8WW33 167 aa10.45□□□□□ -0.74
CD9-210ENST00000543916 MSRB1Q9NZV6 116 aa10.45□□□□□ -0.74
CD9-210ENST00000543916 F2Z2F3 143 aa10.44□□□□□ -0.74
CD9-210ENST00000543916 RHOHQ15669 191 aa10.44□□□□□ -0.74
CD9-210ENST00000543916 MRPL23Q16540 153 aaKnown RBP10.44□□□□□ -0.74
CD9-210ENST00000543916 ESRGQ1W209 222 aa10.44□□□□□ -0.74
CD9-210ENST00000543916 CT83Q5H943 113 aa10.44□□□□□ -0.74
CD9-210ENST00000543916 C14orf178Q8N769 122 aaPredicted RBP10.44□□□□□ -0.74
CD9-210ENST00000543916 LINC00588Q9Y4M8 146 aa10.44□□□□□ -0.74
CD9-210ENST00000543916 V9GYV3 84 aa10.44□□□□□ -0.74
CD9-210ENST00000543916 A8MWL6 223 aa10.43□□□□□ -0.74
CD9-210ENST00000543916 CACNG7P62955 275 aa10.43□□□□□ -0.74
CD9-210ENST00000543916 KIF25-AS1Q9Y6Z4 181 aa10.43□□□□□ -0.74
CD9-210ENST00000543916 CCL18P55774 89 aa10.42□□□□□ -0.74
CD9-210ENST00000543916 C15orf54Q8N8G6 183 aa10.42□□□□□ -0.74
CD9-210ENST00000543916 AP1S3Q96PC3 154 aa10.42□□□□□ -0.74
CD9-210ENST00000543916 PRADC1Q9BSG0 188 aa10.42□□□□□ -0.74
CD9-210ENST00000543916 CNFNQ9BYD5 112 aa10.42□□□□□ -0.74
CD9-210ENST00000543916 Q9UF83 564 aa10.42□□□□□ -0.74
CD9-210ENST00000543916 NTF3P20783 257 aa10.41□□□□□ -0.74
CD9-210ENST00000543916 SRIP30626 198 aa10.41□□□□□ -0.74
CD9-210ENST00000543916 WDR73Q6P4I2 378 aa10.41□□□□□ -0.74
CD9-210ENST00000543916 UQCC3Q6UW78 93 aa10.41□□□□□ -0.74
CD9-210ENST00000543916 NEGR1Q7Z3B1 354 aa10.41□□□□□ -0.74
CD9-210ENST00000543916 COMMD7Q86VX2 200 aa10.41□□□□□ -0.74
CD9-210ENST00000543916 OR10G8Q8NGN5 311 aa10.41□□□□□ -0.74
CD9-210ENST00000543916 TSKUQ8WUA8 353 aa10.41□□□□□ -0.74
CD9-210ENST00000543916 PGLYRP4Q96LB8 373 aa10.41□□□□□ -0.74
CD9-210ENST00000543916 LINC00862A6NCI5 91 aa10.4□□□□□ -0.74
CD9-210ENST00000543916 FOXA3P55318 350 aaPredicted RBP10.4□□□□□ -0.74
CD9-210ENST00000543916 LINC00315P59091 139 aa10.4□□□□□ -0.74
CD9-210ENST00000543916 ZNF56Q15929 161 aa10.4□□□□□ -0.74
CD9-210ENST00000543916 LYPD5Q6UWN5 251 aa10.4□□□□□ -0.74
CD9-210ENST00000543916 ZNRF2Q8NHG8 242 aa10.4□□□□□ -0.74
CD9-210ENST00000543916 GFRA4Q9GZZ7 299 aa10.4□□□□□ -0.74
CD9-210ENST00000543916 MRPS16Q9Y3D3 137 aaKnown RBP10.4□□□□□ -0.74
CD9-210ENST00000543916 LINC00694P0DN24 101 aa10.39□□□□□ -0.75
CD9-210ENST00000543916 ADCYAP1P18509 176 aa10.39□□□□□ -0.75
CD9-210ENST00000543916 FAM3BP58499 235 aaPredicted RBP10.39□□□□□ -0.75
CD9-210ENST00000543916 RAB4BP61018 213 aa10.39□□□□□ -0.75
CD9-210ENST00000543916 KMT2AQ03164 3969 aa10.39□□□□□ -0.75
CD9-210ENST00000543916 IGLV2-18A0A075B6J9 118 aa10.38□□□□□ -0.75
CD9-210ENST00000543916 TMEM218A2RU14 115 aa10.38□□□□□ -0.75
CD9-210ENST00000543916 FAM231BA6NCW3 169 aa10.38□□□□□ -0.75
CD9-210ENST00000543916 GAGE12JA6NER3 117 aa10.38□□□□□ -0.75
CD9-210ENST00000543916 HIGD1CA8MV81 97 aa10.38□□□□□ -0.75
CD9-210ENST00000543916 TRGC1P0CF51 173 aa10.38□□□□□ -0.75
CD9-210ENST00000543916 SMIM17P0DL12 118 aa10.38□□□□□ -0.75
CD9-210ENST00000543916 EVI2AP22794 236 aa10.38□□□□□ -0.75
CD9-210ENST00000543916 GAGE1Q13065 139 aa10.38□□□□□ -0.75
CD9-210ENST00000543916 GAGE4Q13068 117 aa10.38□□□□□ -0.75
CD9-210ENST00000543916 GAGE5Q13069 117 aa10.38□□□□□ -0.75
CD9-210ENST00000543916 TWIST1Q15672 202 aa10.38□□□□□ -0.75
CD9-210ENST00000543916 GAGE13Q4V321 117 aa10.38□□□□□ -0.75
CD9-210ENST00000543916 MGPP08493 103 aa10.37□□□□□ -0.75
CD9-210ENST00000543916 SH2D6Q7Z4S9 175 aa10.37□□□□□ -0.75
CD9-210ENST00000543916 UPK3BQ9BT76 320 aa10.37□□□□□ -0.75
CD9-210ENST00000543916 DNAH6Q9C0G6 4158 aa10.37□□□□□ -0.75
CD9-210ENST00000543916 SMIM27A0A1W2PRY6 76 aa10.36□□□□□ -0.75
CD9-210ENST00000543916 F5H697 171 aa10.36□□□□□ -0.75
CD9-210ENST00000543916 PNRC1Q12796 327 aaPredicted RBP10.36□□□□□ -0.75
CD9-210ENST00000543916 DPH3P1Q9H4G8 78 aa10.36□□□□□ -0.75
CD9-210ENST00000543916 TRBV10-1A0A0K0K1A3 114 aa10.35□□□□□ -0.75
CD9-210ENST00000543916 A0A1B0GUT8 65 aa10.35□□□□□ -0.75
CD9-210ENST00000543916 F8W036 122 aa10.35□□□□□ -0.75
CD9-210ENST00000543916 M0R2N4 97 aa10.35□□□□□ -0.75
CD9-210ENST00000543916 NUP35Q8NFH5 326 aa10.35□□□□□ -0.75
CD9-210ENST00000543916 ATP6V0E2Q8NHE4 81 aa10.35□□□□□ -0.75
CD9-210ENST00000543916 BORCS7Q96B45 105 aa10.35□□□□□ -0.75
CD9-210ENST00000543916 TIRAPP58753 221 aa10.34□□□□□ -0.75
CD9-210ENST00000543916 SUMO4Q6EEV6 95 aa10.34□□□□□ -0.75
CD9-210ENST00000543916 NEXN-AS1Q8NBZ9 246 aa10.34□□□□□ -0.75
CD9-210ENST00000543916 Q9H8V8 135 aa10.34□□□□□ -0.75
CD9-210ENST00000543916 NAT8BQ9UHF3 227 aa10.34□□□□□ -0.75
CD9-210ENST00000543916 RPL36AP83881 106 aaKnown RBP10.33□□□□□ -0.76
CD9-210ENST00000543916 Q6ZR54 194 aa10.33□□□□□ -0.76
CD9-210ENST00000543916 RPL36ALQ969Q0 106 aaKnown RBP10.33□□□□□ -0.76
CD9-210ENST00000543916 GTSF1LQ9H1H1 148 aa10.33□□□□□ -0.76
CD9-210ENST00000543916 TRBV7-3A0A075B6L6 115 aa10.32□□□□□ -0.76
CD9-210ENST00000543916 M0QY20 66 aa10.32□□□□□ -0.76
CD9-210ENST00000543916 PPP1R2P9O14990 202 aa10.32□□□□□ -0.76
CD9-210ENST00000543916 UBE2D3P61077 147 aa10.32□□□□□ -0.76
CD9-210ENST00000543916 UBE2D2P62837 147 aa10.32□□□□□ -0.76
CD9-210ENST00000543916 WFDC10BQ8IUB3 73 aa10.32□□□□□ -0.76
CD9-210ENST00000543916 SEC11CQ9BY50 192 aa10.32□□□□□ -0.76
CD9-210ENST00000543916 NBDYA0A0U1RRE5 68 aa10.31□□□□□ -0.76
CD9-210ENST00000543916 SIVA1O15304 175 aa10.31□□□□□ -0.76
CD9-210ENST00000543916 RIGQ13278 110 aa10.31□□□□□ -0.76
CD9-210ENST00000543916 SMIM15Q7Z3B0 74 aa10.31□□□□□ -0.76
CD9-210ENST00000543916 KRTAP1-5Q9BYS1 174 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms