RNA–Protein interactions for RNA: ENST00000543590.1

VPS37B-204, Transcript of VPS37B, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37B, Length 1,457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37B-204ENST00000543590 LINC00694P0DN24 101 aa9.64□□□□□ -0.87
VPS37B-204ENST00000543590 ERVFC1-1P60608 527 aa9.64□□□□□ -0.87
VPS37B-204ENST00000543590 NDUFA5Q16718 116 aa9.64□□□□□ -0.87
VPS37B-204ENST00000543590 SFRP2Q96HF1 295 aa9.64□□□□□ -0.87
VPS37B-204ENST00000543590 DYNC1H1Q14204 4646 aaKnown RBP9.63□□□□□ -0.87
VPS37B-204ENST00000543590 A0A087WWL8 130 aa9.63□□□□□ -0.87
VPS37B-204ENST00000543590 TEX46H3BTG2 121 aa9.63□□□□□ -0.87
VPS37B-204ENST00000543590 EREGO14944 169 aa9.63□□□□□ -0.87
VPS37B-204ENST00000543590 CDK2AP2O75956 126 aa9.63□□□□□ -0.87
VPS37B-204ENST00000543590 RPL35P42766 123 aaKnown RBP9.63□□□□□ -0.87
VPS37B-204ENST00000543590 SULT1A2P50226 295 aa9.63□□□□□ -0.87
VPS37B-204ENST00000543590 RPL19P84098 196 aaKnown RBP9.63□□□□□ -0.87
VPS37B-204ENST00000543590 FAM74A4Q5TZK3 123 aa9.63□□□□□ -0.87
VPS37B-204ENST00000543590 ZFP82Q8N141 532 aa9.63□□□□□ -0.87
VPS37B-204ENST00000543590 C11orf52Q96A22 123 aa9.63□□□□□ -0.87
VPS37B-204ENST00000543590 PRR27Q6MZM9 219 aa9.62□□□□□ -0.87
VPS37B-204ENST00000543590 SLC51BQ86UW2 128 aa9.62□□□□□ -0.87
VPS37B-204ENST00000543590 DERL1Q9BUN8 251 aa9.62□□□□□ -0.87
VPS37B-204ENST00000543590 A0A087WTM6 91 aa9.61□□□□□ -0.87
VPS37B-204ENST00000543590 IBA57-AS1B1ANH7 110 aa9.61□□□□□ -0.87
VPS37B-204ENST00000543590 IGHV3-30P01768 117 aa9.61□□□□□ -0.87
VPS37B-204ENST00000543590 IGHV3-33P01772 117 aa9.61□□□□□ -0.87
VPS37B-204ENST00000543590 CXCL1P09341 107 aa9.61□□□□□ -0.87
VPS37B-204ENST00000543590 IGHV3-30-3P0DP02 117 aa9.61□□□□□ -0.87
VPS37B-204ENST00000543590 IGHV3-30-5P0DP03 117 aa9.61□□□□□ -0.87
VPS37B-204ENST00000543590 PGPEP1Q9NXJ5 209 aa9.61□□□□□ -0.87
VPS37B-204ENST00000543590 OR10AG1Q8NH19 301 aa9.6□□□□□ -0.87
VPS37B-204ENST00000543590 FUSP35637 526 aaKnown RBP eCLIP9.59□□□□□ -0.87
VPS37B-204ENST00000543590 SSBP4Q9BWG4 385 aaPredicted RBP9.59□□□□□ -0.87
VPS37B-204ENST00000543590 A0A087WWC5 75 aa9.59□□□□□ -0.87
VPS37B-204ENST00000543590 SNAI2O43623 268 aa9.59□□□□□ -0.87
VPS37B-204ENST00000543590 IFITM2Q01629 132 aa9.59□□□□□ -0.87
VPS37B-204ENST00000543590 CENPWQ5EE01 88 aa9.59□□□□□ -0.87
VPS37B-204ENST00000543590 Q9HAA7 133 aa9.59□□□□□ -0.87
VPS37B-204ENST00000543590 MUC21A0A0G2JKD1 596 aa9.58□□□□□ -0.88
VPS37B-204ENST00000543590 MUC21A0A140T8X8 626 aa9.58□□□□□ -0.88
VPS37B-204ENST00000543590 RAB19A4D1S5 217 aa9.58□□□□□ -0.88
VPS37B-204ENST00000543590 IFNA1P01562 189 aa9.58□□□□□ -0.88
VPS37B-204ENST00000543590 IGLV2-8P01709 118 aa9.58□□□□□ -0.88
VPS37B-204ENST00000543590 OR5AL1P0C617 328 aa9.58□□□□□ -0.88
VPS37B-204ENST00000543590 MEF2BQ02080 365 aaPredicted RBP9.58□□□□□ -0.88
VPS37B-204ENST00000543590 CDPF1Q6NVV7 123 aa9.58□□□□□ -0.88
VPS37B-204ENST00000543590 Q8N3U1 123 aa9.58□□□□□ -0.88
VPS37B-204ENST00000543590 C9orf62Q8N4C0 152 aa9.58□□□□□ -0.88
VPS37B-204ENST00000543590 TRBV10-1A0A0K0K1A3 114 aa9.57□□□□□ -0.88
VPS37B-204ENST00000543590 PSCAO43653 123 aa9.57□□□□□ -0.88
VPS37B-204ENST00000543590 PDE6DO43924 150 aa9.57□□□□□ -0.88
VPS37B-204ENST00000543590 BCL2P10415 239 aa9.57□□□□□ -0.88
VPS37B-204ENST00000543590 S100A1P23297 94 aa9.57□□□□□ -0.88
VPS37B-204ENST00000543590 SPANXN1Q5VSR9 72 aa9.57□□□□□ -0.88
VPS37B-204ENST00000543590 KRTAP4-5Q9BYR2 181 aa9.57□□□□□ -0.88
VPS37B-204ENST00000543590 GNG4P50150 75 aa9.56□□□□□ -0.88
VPS37B-204ENST00000543590 RAB4BP61018 213 aa9.56□□□□□ -0.88
VPS37B-204ENST00000543590 RPL36AP83881 106 aaKnown RBP9.56□□□□□ -0.88
VPS37B-204ENST00000543590 LAGE3Q14657 143 aa9.56□□□□□ -0.88
VPS37B-204ENST00000543590 RPL36ALQ969Q0 106 aaKnown RBP9.56□□□□□ -0.88
VPS37B-204ENST00000543590 MED9Q9NWA0 146 aa9.56□□□□□ -0.88
VPS37B-204ENST00000543590 VAX2Q9UIW0 290 aa9.56□□□□□ -0.88
VPS37B-204ENST00000543590 TRBV7-3A0A075B6L6 115 aa9.55□□□□□ -0.88
VPS37B-204ENST00000543590 LRCOL1A6NCL2 159 aa9.55□□□□□ -0.88
VPS37B-204ENST00000543590 NKX2-5P52952 324 aaPredicted RBP9.55□□□□□ -0.88
VPS37B-204ENST00000543590 SSTP61278 116 aa9.55□□□□□ -0.88
VPS37B-204ENST00000543590 ZNF56Q15929 161 aa9.55□□□□□ -0.88
VPS37B-204ENST00000543590 DAZ4Q86SG3 579 aaKnown RBP9.55□□□□□ -0.88
VPS37B-204ENST00000543590 MAPKAPK5-AS1Q8N8E1 139 aa9.55□□□□□ -0.88
VPS37B-204ENST00000543590 DAZAP1Q96EP5 407 aaKnown RBP9.55□□□□□ -0.88
VPS37B-204ENST00000543590 SMIM12Q96EX1 92 aa9.55□□□□□ -0.88
VPS37B-204ENST00000543590 DAZ3Q9NR90 486 aaKnown RBP9.55□□□□□ -0.88
VPS37B-204ENST00000543590 TRBV20OR9-2A0A075B6H5 130 aa9.54□□□□□ -0.88
VPS37B-204ENST00000543590 C19orf71A6NCJ1 209 aa9.54□□□□□ -0.88
VPS37B-204ENST00000543590 GZMBP10144 247 aa9.54□□□□□ -0.88
VPS37B-204ENST00000543590 UBE2D3P61077 147 aa9.54□□□□□ -0.88
VPS37B-204ENST00000543590 UBE2D2P62837 147 aa9.54□□□□□ -0.88
VPS37B-204ENST00000543590 OR2D3Q8NGH3 330 aa9.54□□□□□ -0.88
VPS37B-204ENST00000543590 TAGLN2P37802 199 aaKnown RBP9.53□□□□□ -0.88
VPS37B-204ENST00000543590 RPS20P60866 119 aaKnown RBP9.53□□□□□ -0.88
VPS37B-204ENST00000543590 NIT1Q86X76 327 aa9.53□□□□□ -0.88
VPS37B-204ENST00000543590 OR10G8Q8NGN5 311 aa9.53□□□□□ -0.88
VPS37B-204ENST00000543590 RBFOX3A6NFN3 312 aa9.53□□□□□ -0.88
VPS37B-204ENST00000543590 F5H697 171 aa9.53□□□□□ -0.88
VPS37B-204ENST00000543590 IGLC6P0CF74 106 aa9.53□□□□□ -0.88
VPS37B-204ENST00000543590 ALKAL2Q6UX46 152 aa9.53□□□□□ -0.88
VPS37B-204ENST00000543590 FER1L6-AS1Q8NA97 138 aa9.53□□□□□ -0.88
VPS37B-204ENST00000543590 NEXN-AS1Q8NBZ9 246 aa9.53□□□□□ -0.88
VPS37B-204ENST00000543590 TPPP3Q9BW30 176 aa9.53□□□□□ -0.88
VPS37B-204ENST00000543590 TM2D2Q9BX73 214 aa9.53□□□□□ -0.88
VPS37B-204ENST00000543590 KIF25-AS1Q9Y6Z4 181 aa9.53□□□□□ -0.88
VPS37B-204ENST00000543590 URGCP-MRPS24S4R325 110 aa9.53□□□□□ -0.88
VPS37B-204ENST00000543590 TRAV8-3A0A0A6YYJ7 113 aa9.52□□□□□ -0.89
VPS37B-204ENST00000543590 P01737 135 aa9.52□□□□□ -0.89
VPS37B-204ENST00000543590 KRTAP10-1P60331 282 aa9.52□□□□□ -0.89
VPS37B-204ENST00000543590 TOR2AQ5JU69 321 aa9.52□□□□□ -0.89
VPS37B-204ENST00000543590 Q8N1X5 172 aa9.52□□□□□ -0.89
VPS37B-204ENST00000543590 AP1S3Q96PC3 154 aa9.52□□□□□ -0.89
VPS37B-204ENST00000543590 BIN3Q9NQY0 253 aa9.52□□□□□ -0.89
VPS37B-204ENST00000543590 XKRY2A2RUG3 117 aa9.51□□□□□ -0.89
VPS37B-204ENST00000543590 SMIM17P0DL12 118 aa9.51□□□□□ -0.89
VPS37B-204ENST00000543590 LRP1BQ9NZR2 4599 aa9.51□□□□□ -0.89
VPS37B-204ENST00000543590 GCSHP23434 173 aa9.5□□□□□ -0.89
VPS37B-204ENST00000543590 BLOC1S1P78537 153 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms