RNA–Protein interactions for RNA: ENST00000543585.1

SCNN1A-220, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 4

Gene SCNN1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-220ENST00000543585 GAGE12JA6NER3 117 aa10.7□□□□□ -0.7
SCNN1A-220ENST00000543585 SNAI2O43623 268 aa10.7□□□□□ -0.7
SCNN1A-220ENST00000543585 BTF3P20290 206 aaKnown RBP10.7□□□□□ -0.7
SCNN1A-220ENST00000543585 GAGE1Q13065 139 aa10.7□□□□□ -0.7
SCNN1A-220ENST00000543585 GAGE4Q13068 117 aa10.7□□□□□ -0.7
SCNN1A-220ENST00000543585 GAGE5Q13069 117 aa10.7□□□□□ -0.7
SCNN1A-220ENST00000543585 GAGE13Q4V321 117 aa10.7□□□□□ -0.7
SCNN1A-220ENST00000543585 FAM74A4Q5TZK3 123 aa10.7□□□□□ -0.7
SCNN1A-220ENST00000543585 ZFP82Q8N141 532 aa10.7□□□□□ -0.7
SCNN1A-220ENST00000543585 SSBP4Q9BWG4 385 aaPredicted RBP10.7□□□□□ -0.7
SCNN1A-220ENST00000543585 VAX2Q9UIW0 290 aa10.7□□□□□ -0.7
SCNN1A-220ENST00000543585 LY96Q9Y6Y9 160 aa10.7□□□□□ -0.7
SCNN1A-220ENST00000543585 APOBP04114 4563 aaKnown RBP10.7□□□□□ -0.7
SCNN1A-220ENST00000543585 MUC21A0A0G2JKD1 596 aa10.69□□□□□ -0.7
SCNN1A-220ENST00000543585 MUC21A0A140T8X8 626 aa10.69□□□□□ -0.7
SCNN1A-220ENST00000543585 C19orf71A6NCJ1 209 aa10.69□□□□□ -0.7
SCNN1A-220ENST00000543585 IFNA1P01562 189 aa10.69□□□□□ -0.7
SCNN1A-220ENST00000543585 ATP6V0E2Q8NHE4 81 aa10.69□□□□□ -0.7
SCNN1A-220ENST00000543585 MED9Q9NWA0 146 aa10.69□□□□□ -0.7
SCNN1A-220ENST00000543585 RHODO00212 210 aa10.68□□□□□ -0.7
SCNN1A-220ENST00000543585 PDE6DO43924 150 aa10.68□□□□□ -0.7
SCNN1A-220ENST00000543585 GZMBP10144 247 aa10.68□□□□□ -0.7
SCNN1A-220ENST00000543585 LYPD6BQ8NI32 183 aa10.68□□□□□ -0.7
SCNN1A-220ENST00000543585 GTSF1LQ9H1H1 148 aa10.68□□□□□ -0.7
SCNN1A-220ENST00000543585 IGHV3-38A0A0C4DH36 116 aa10.67□□□□□ -0.7
SCNN1A-220ENST00000543585 OR5AL1P0C617 328 aa10.67□□□□□ -0.7
SCNN1A-220ENST00000543585 KRTAP10-2P60368 255 aa10.67□□□□□ -0.7
SCNN1A-220ENST00000543585 LELP1Q5T871 98 aa10.67□□□□□ -0.7
SCNN1A-220ENST00000543585 Q8N3U1 123 aa10.67□□□□□ -0.7
SCNN1A-220ENST00000543585 GNG4P50150 75 aa10.66□□□□□ -0.7
SCNN1A-220ENST00000543585 LINC01556Q5JQF7 62 aa10.66□□□□□ -0.7
SCNN1A-220ENST00000543585 RBFOX3A6NFN3 312 aa10.65□□□□□ -0.7
SCNN1A-220ENST00000543585 IGLC6P0CF74 106 aa10.65□□□□□ -0.7
SCNN1A-220ENST00000543585 EVI2AP22794 236 aa10.65□□□□□ -0.7
SCNN1A-220ENST00000543585 OR10J3Q5JRS4 329 aa10.65□□□□□ -0.7
SCNN1A-220ENST00000543585 SPATA12Q7Z6I5 190 aa10.65□□□□□ -0.7
SCNN1A-220ENST00000543585 SMIM12Q96EX1 92 aa10.65□□□□□ -0.7
SCNN1A-220ENST00000543585 MSRB1Q9NZV6 116 aa10.65□□□□□ -0.7
SCNN1A-220ENST00000543585 K7EN84 100 aa10.64□□□□□ -0.71
SCNN1A-220ENST00000543585 TAGLN2P37802 199 aaKnown RBP10.64□□□□□ -0.71
SCNN1A-220ENST00000543585 SSTP61278 116 aa10.64□□□□□ -0.71
SCNN1A-220ENST00000543585 BLOC1S1P78537 153 aa10.64□□□□□ -0.71
SCNN1A-220ENST00000543585 OR2D3Q8NGH3 330 aa10.64□□□□□ -0.71
SCNN1A-220ENST00000543585 KIF25-AS1Q9Y6Z4 181 aa10.64□□□□□ -0.71
SCNN1A-220ENST00000543585 TRAV9-2A0A087WT02 112 aa10.63□□□□□ -0.71
SCNN1A-220ENST00000543585 TRAV8-6A0A0B4J262 113 aa10.63□□□□□ -0.71
SCNN1A-220ENST00000543585 C16orf90A8MZG2 172 aa10.63□□□□□ -0.71
SCNN1A-220ENST00000543585 IGHV3-30P01768 117 aa10.63□□□□□ -0.71
SCNN1A-220ENST00000543585 IGHV3-33P01772 117 aa10.63□□□□□ -0.71
SCNN1A-220ENST00000543585 IGHV3-30-3P0DP02 117 aa10.63□□□□□ -0.71
SCNN1A-220ENST00000543585 IGHV3-30-5P0DP03 117 aa10.63□□□□□ -0.71
SCNN1A-220ENST00000543585 SPANXN1Q5VSR9 72 aa10.63□□□□□ -0.71
SCNN1A-220ENST00000543585 K7EP13 123 aa10.62□□□□□ -0.71
SCNN1A-220ENST00000543585 FUSP35637 526 aaKnown RBP eCLIP10.62□□□□□ -0.71
SCNN1A-220ENST00000543585 OCC1Q8TAD7 63 aa10.62□□□□□ -0.71
SCNN1A-220ENST00000543585 DAZAP1Q96EP5 407 aaKnown RBP10.62□□□□□ -0.71
SCNN1A-220ENST00000543585 PCLOQ9Y6V0 5065 aa10.61□□□□□ -0.71
SCNN1A-220ENST00000543585 TRBV10-1A0A0K0K1A3 114 aa10.61□□□□□ -0.71
SCNN1A-220ENST00000543585 IBA57-AS1B1ANH7 110 aa10.61□□□□□ -0.71
SCNN1A-220ENST00000543585 RAB4BP61018 213 aa10.61□□□□□ -0.71
SCNN1A-220ENST00000543585 UBE2D3P61077 147 aa10.61□□□□□ -0.71
SCNN1A-220ENST00000543585 UBE2D2P62837 147 aa10.61□□□□□ -0.71
SCNN1A-220ENST00000543585 NFE4Q86UQ8 179 aa10.61□□□□□ -0.71
SCNN1A-220ENST00000543585 C10orf126Q8N4M7 172 aa10.61□□□□□ -0.71
SCNN1A-220ENST00000543585 FER1L6-AS1Q8NA97 138 aa10.61□□□□□ -0.71
SCNN1A-220ENST00000543585 NUDT10Q8NFP7 164 aa10.61□□□□□ -0.71
SCNN1A-220ENST00000543585 NUDT11Q96G61 164 aa10.61□□□□□ -0.71
SCNN1A-220ENST00000543585 KRTAP17-1Q9BYP8 105 aa10.61□□□□□ -0.71
SCNN1A-220ENST00000543585 P01737 135 aa10.6□□□□□ -0.71
SCNN1A-220ENST00000543585 RPS20P60866 119 aaKnown RBP10.6□□□□□ -0.71
SCNN1A-220ENST00000543585 ZNF56Q15929 161 aa10.6□□□□□ -0.71
SCNN1A-220ENST00000543585 TOR2AQ5JU69 321 aa10.6□□□□□ -0.71
SCNN1A-220ENST00000543585 NEXN-AS1Q8NBZ9 246 aa10.6□□□□□ -0.71
SCNN1A-220ENST00000543585 OR10G8Q8NGN5 311 aa10.6□□□□□ -0.71
SCNN1A-220ENST00000543585 TPPP3Q9BW30 176 aa10.6□□□□□ -0.71
SCNN1A-220ENST00000543585 RNASE7Q9H1E1 156 aaKnown RBP10.6□□□□□ -0.71
SCNN1A-220ENST00000543585 A0A087WTM6 91 aa10.59□□□□□ -0.71
SCNN1A-220ENST00000543585 TMEM250H0YL14 139 aa10.59□□□□□ -0.71
SCNN1A-220ENST00000543585 LYZL1Q6UWQ5 148 aa10.59□□□□□ -0.71
SCNN1A-220ENST00000543585 TRBV7-3A0A075B6L6 115 aa10.58□□□□□ -0.72
SCNN1A-220ENST00000543585 RPL36AP83881 106 aaKnown RBP10.58□□□□□ -0.72
SCNN1A-220ENST00000543585 RPL36ALQ969Q0 106 aaKnown RBP10.58□□□□□ -0.72
SCNN1A-220ENST00000543585 AP1S3Q96PC3 154 aa10.58□□□□□ -0.72
SCNN1A-220ENST00000543585 BIN3Q9NQY0 253 aa10.58□□□□□ -0.72
SCNN1A-220ENST00000543585 ERVFC1-1P60608 527 aa10.57□□□□□ -0.72
SCNN1A-220ENST00000543585 DAZ4Q86SG3 579 aaKnown RBP10.57□□□□□ -0.72
SCNN1A-220ENST00000543585 FAM210AQ96ND0 272 aa10.57□□□□□ -0.72
SCNN1A-220ENST00000543585 Q9HAA7 133 aa10.57□□□□□ -0.72
SCNN1A-220ENST00000543585 DAZ3Q9NR90 486 aaKnown RBP10.57□□□□□ -0.72
SCNN1A-220ENST00000543585 A0A087WWC5 75 aa10.56□□□□□ -0.72
SCNN1A-220ENST00000543585 LRCOL1A6NCL2 159 aa10.56□□□□□ -0.72
SCNN1A-220ENST00000543585 CTRLP40313 264 aa10.56□□□□□ -0.72
SCNN1A-220ENST00000543585 CACNG7P62955 275 aa10.56□□□□□ -0.72
SCNN1A-220ENST00000543585 DNAJC30Q96LL9 226 aa10.56□□□□□ -0.72
SCNN1A-220ENST00000543585 RPP21Q9H633 154 aaKnown RBP10.56□□□□□ -0.72
SCNN1A-220ENST00000543585 ABCA13Q86UQ4 5058 aa10.56□□□□□ -0.72
SCNN1A-220ENST00000543585 F5H697 171 aa10.55□□□□□ -0.72
SCNN1A-220ENST00000543585 SRP19P09132 144 aaKnown RBP10.55□□□□□ -0.72
SCNN1A-220ENST00000543585 CEBPGP53567 150 aa10.55□□□□□ -0.72
SCNN1A-220ENST00000543585 NIT1Q86X76 327 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms