RNA–Protein interactions for RNA: ENST00000543469.1

TRIM59-208, Transcript of tripartite motif containing 59, humanhuman

TSL 5 BASIC

Gene TRIM59, Length 4,615 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-208ENST00000543469 TEX43Q6ZNM6 134 aa5.86□□□□□ -1.47
TRIM59-208ENST00000543469 OVOL2Q9BRP0 275 aa5.86□□□□□ -1.47
TRIM59-208ENST00000543469 SCRT2Q9NQ03 307 aa5.86□□□□□ -1.47
TRIM59-208ENST00000543469 TRAV10A0A0B4J240 114 aa5.86□□□□□ -1.47
TRIM59-208ENST00000543469 CRIP1P50238 77 aa5.86□□□□□ -1.47
TRIM59-208ENST00000543469 GDF5OSQ5U4N7 250 aa5.86□□□□□ -1.47
TRIM59-208ENST00000543469 TRBV7-3A0A075B6L6 115 aa5.85□□□□□ -1.47
TRIM59-208ENST00000543469 CRYBA4P53673 196 aa5.85□□□□□ -1.47
TRIM59-208ENST00000543469 C11orf45Q8TAV5 145 aa5.85□□□□□ -1.47
TRIM59-208ENST00000543469 IGHV3-53P01767 116 aa5.85□□□□□ -1.47
TRIM59-208ENST00000543469 ZNF25P17030 456 aaPredicted RBP5.85□□□□□ -1.47
TRIM59-208ENST00000543469 DPM2O94777 84 aa5.85□□□□□ -1.47
TRIM59-208ENST00000543469 SS18Q15532 418 aa5.85□□□□□ -1.47
TRIM59-208ENST00000543469 SFTA2Q6UW10 78 aa5.85□□□□□ -1.47
TRIM59-208ENST00000543469 ATP6V0E2Q8NHE4 81 aa5.85□□□□□ -1.47
TRIM59-208ENST00000543469 ZNRF2Q8NHG8 242 aa5.85□□□□□ -1.47
TRIM59-208ENST00000543469 HHLA3Q9XRX5 114 aa5.85□□□□□ -1.47
TRIM59-208ENST00000543469 APOMO95445 188 aa5.84□□□□□ -1.47
TRIM59-208ENST00000543469 CIRBPQ14011 172 aaKnown RBP5.84□□□□□ -1.47
TRIM59-208ENST00000543469 U3KQK5 164 aa5.84□□□□□ -1.47
TRIM59-208ENST00000543469 COL6A3P12111 3177 aa5.84□□□□□ -1.47
TRIM59-208ENST00000543469 GAGE12JA6NER3 117 aa5.84□□□□□ -1.47
TRIM59-208ENST00000543469 GAGE1Q13065 139 aa5.84□□□□□ -1.47
TRIM59-208ENST00000543469 GAGE4Q13068 117 aa5.84□□□□□ -1.47
TRIM59-208ENST00000543469 GAGE5Q13069 117 aa5.84□□□□□ -1.47
TRIM59-208ENST00000543469 GAGE13Q4V321 117 aa5.84□□□□□ -1.47
TRIM59-208ENST00000543469 C11orf68Q9H3H3 251 aaKnown RBP5.84□□□□□ -1.47
TRIM59-208ENST00000543469 XIRP2A4UGR9 3374 aa5.84□□□□□ -1.47
TRIM59-208ENST00000543469 C5orf52A6NGY3 159 aa5.84□□□□□ -1.47
TRIM59-208ENST00000543469 MDFICQ9P1T7 246 aa5.84□□□□□ -1.47
TRIM59-208ENST00000543469 SNCGO76070 127 aa5.84□□□□□ -1.48
TRIM59-208ENST00000543469 CCL18P55774 89 aa5.84□□□□□ -1.48
TRIM59-208ENST00000543469 M0R143 59 aa5.83□□□□□ -1.48
TRIM59-208ENST00000543469 EGFEM1PQ0D2K5 195 aa5.83□□□□□ -1.48
TRIM59-208ENST00000543469 LINC00322Q6ZN03 302 aaPredicted RBP5.83□□□□□ -1.48
TRIM59-208ENST00000543469 HIST3H2BBQ8N257 126 aa5.83□□□□□ -1.48
TRIM59-208ENST00000543469 PLEKHB2Q96CS7 222 aa5.83□□□□□ -1.48
TRIM59-208ENST00000543469 EDA2RQ9HAV5 297 aa5.83□□□□□ -1.48
TRIM59-208ENST00000543469 CHTOPQ9Y3Y2 248 aaKnown RBP5.83□□□□□ -1.48
TRIM59-208ENST00000543469 FASNP49327 2511 aaKnown RBP5.83□□□□□ -1.48
TRIM59-208ENST00000543469 NPYP01303 97 aa5.83□□□□□ -1.48
TRIM59-208ENST00000543469 LGALS3P17931 250 aaKnown RBP5.83□□□□□ -1.48
TRIM59-208ENST00000543469 NEGR1Q7Z3B1 354 aa5.83□□□□□ -1.48
TRIM59-208ENST00000543469 ERASQ7Z444 233 aa5.83□□□□□ -1.48
TRIM59-208ENST00000543469 IGHV3-73A0A0B4J1V6 119 aa5.83□□□□□ -1.48
TRIM59-208ENST00000543469 IGHV4-28A0A0C4DH34 117 aa5.83□□□□□ -1.48
TRIM59-208ENST00000543469 PRSS2P07478 247 aa5.83□□□□□ -1.48
TRIM59-208ENST00000543469 RNASE3P12724 160 aaKnown RBP5.83□□□□□ -1.48
TRIM59-208ENST00000543469 OXLD1Q5BKU9 147 aa5.83□□□□□ -1.48
TRIM59-208ENST00000543469 ESDP10768 282 aa5.83□□□□□ -1.48
TRIM59-208ENST00000543469 C2orf66Q6UXQ4 117 aa5.83□□□□□ -1.48
TRIM59-208ENST00000543469 TCTAP57738 103 aa5.82□□□□□ -1.48
TRIM59-208ENST00000543469 FAM222AQ5U5X8 452 aa5.82□□□□□ -1.48
TRIM59-208ENST00000543469 CFAP126Q5VTH2 177 aa5.82□□□□□ -1.48
TRIM59-208ENST00000543469 PMVKQ15126 192 aa5.82□□□□□ -1.48
TRIM59-208ENST00000543469 PRR9Q5T870 116 aa5.82□□□□□ -1.48
TRIM59-208ENST00000543469 TIMM17AQ99595 171 aa5.82□□□□□ -1.48
TRIM59-208ENST00000543469 FRMD6-AS1P0C7T7 363 aa5.82□□□□□ -1.48
TRIM59-208ENST00000543469 GYPEP15421 78 aa5.82□□□□□ -1.48
TRIM59-208ENST00000543469 DEFB1P60022 68 aa5.82□□□□□ -1.48
TRIM59-208ENST00000543469 IFITM10A6NMD0 228 aa5.81□□□□□ -1.48
TRIM59-208ENST00000543469 IGKCP01834 107 aa5.81□□□□□ -1.48
TRIM59-208ENST00000543469 EDN2P20800 178 aa5.81□□□□□ -1.48
TRIM59-208ENST00000543469 KRTAP21-3Q3LHN1 58 aa5.81□□□□□ -1.48
TRIM59-208ENST00000543469 SAMD5Q5TGI4 173 aa5.81□□□□□ -1.48
TRIM59-208ENST00000543469 CFAP161Q6P656 301 aa5.81□□□□□ -1.48
TRIM59-208ENST00000543469 C1orf158Q8N1D5 194 aa5.81□□□□□ -1.48
TRIM59-208ENST00000543469 RNASE8Q8TDE3 154 aaKnown RBP5.81□□□□□ -1.48
TRIM59-208ENST00000543469 UNC80Q8N2C7 3258 aa5.81□□□□□ -1.48
TRIM59-208ENST00000543469 TRAV26-1A0A087WT03 109 aa5.81□□□□□ -1.48
TRIM59-208ENST00000543469 C10orf126Q8N4M7 172 aa5.81□□□□□ -1.48
TRIM59-208ENST00000543469 TMEM238LA0A1B0GVL6 79 aa5.81□□□□□ -1.48
TRIM59-208ENST00000543469 A6NJY4 79 aa5.81□□□□□ -1.48
TRIM59-208ENST00000543469 JOSD1Q15040 202 aaPredicted RBP5.81□□□□□ -1.48
TRIM59-208ENST00000543469 LGALS9CQ6DKI2 356 aa5.81□□□□□ -1.48
TRIM59-208ENST00000543469 C18orf15Q96N68 181 aa5.81□□□□□ -1.48
TRIM59-208ENST00000543469 YPEL4Q96NS1 127 aa5.81□□□□□ -1.48
TRIM59-208ENST00000543469 CHCHD7Q9BUK0 85 aa5.81□□□□□ -1.48
TRIM59-208ENST00000543469 CBY1Q9Y3M2 126 aa5.81□□□□□ -1.48
TRIM59-208ENST00000543469 PRSS47A8MTI9 375 aa5.81□□□□□ -1.48
TRIM59-208ENST00000543469 HNRNPA3P51991 378 aaKnown RBP5.81□□□□□ -1.48
TRIM59-208ENST00000543469 KRTAP10-3P60369 221 aa5.81□□□□□ -1.48
TRIM59-208ENST00000543469 LYRM7Q5U5X0 104 aa5.81□□□□□ -1.48
TRIM59-208ENST00000543469 BOD1L2Q8IYS8 172 aa5.81□□□□□ -1.48
TRIM59-208ENST00000543469 HELZ2Q9BYK8 2649 aaKnown RBP5.8□□□□□ -1.48
TRIM59-208ENST00000543469 SMKR1H3BMG3 65 aa5.8□□□□□ -1.48
TRIM59-208ENST00000543469 C12orf57Q99622 126 aa5.8□□□□□ -1.48
TRIM59-208ENST00000543469 TIMM21Q9BVV7 248 aa5.8□□□□□ -1.48
TRIM59-208ENST00000543469 NUPR2A6NF83 97 aa5.8□□□□□ -1.48
TRIM59-208ENST00000543469 H3BNG1 76 aa5.8□□□□□ -1.48
TRIM59-208ENST00000543469 HERVK_113P63121 156 aa5.8□□□□□ -1.48
TRIM59-208ENST00000543469 TRAV12-1A0A0B4J245 112 aa5.8□□□□□ -1.48
TRIM59-208ENST00000543469 PRB4P10163 310 aaPredicted RBP5.8□□□□□ -1.48
TRIM59-208ENST00000543469 GATA1P15976 413 aaPredicted RBP5.8□□□□□ -1.48
TRIM59-208ENST00000543469 MALP21145 153 aa5.8□□□□□ -1.48
TRIM59-208ENST00000543469 Q6ZTI0 123 aa5.8□□□□□ -1.48
TRIM59-208ENST00000543469 HIST1H2BLQ99880 126 aa5.8□□□□□ -1.48
TRIM59-208ENST00000543469 C11orf21Q9P2W6 132 aa5.8□□□□□ -1.48
TRIM59-208ENST00000543469 COX11Q9Y6N1 276 aa5.8□□□□□ -1.48
TRIM59-208ENST00000543469 ABCA2Q9BZC7 2435 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms