RNA–Protein interactions for RNA: ENST00000540128.1

TRIM65-202, Transcript of tripartite motif containing 65, humanhuman

TSL 3

Gene TRIM65, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-202ENST00000540128 SPANXN1Q5VSR9 72 aa15.24■□□□□ 0.03
TRIM65-202ENST00000540128 WDR73Q6P4I2 378 aa15.24■□□□□ 0.03
TRIM65-202ENST00000540128 NEGR1Q7Z3B1 354 aa15.24■□□□□ 0.03
TRIM65-202ENST00000540128 SH2D6Q7Z4S9 175 aa15.24■□□□□ 0.03
TRIM65-202ENST00000540128 ZNRF2Q8NHG8 242 aa15.24■□□□□ 0.03
TRIM65-202ENST00000540128 UPK3BQ9BT76 320 aa15.24■□□□□ 0.03
TRIM65-202ENST00000540128 KMT2AQ03164 3969 aa15.24■□□□□ 0.03
TRIM65-202ENST00000540128 MUC21A0A0G2JKD1 596 aa15.23■□□□□ 0.03
TRIM65-202ENST00000540128 MUC21A0A140T8X8 626 aa15.23■□□□□ 0.03
TRIM65-202ENST00000540128 SRIP30626 198 aa15.23■□□□□ 0.03
TRIM65-202ENST00000540128 CACNG7P62955 275 aa15.23■□□□□ 0.03
TRIM65-202ENST00000540128 MRPS16Q9Y3D3 137 aaKnown RBP15.23■□□□□ 0.03
TRIM65-202ENST00000540128 DNAH6Q9C0G6 4158 aa15.22■□□□□ 0.03
TRIM65-202ENST00000540128 A0A087WWL8 130 aa15.22■□□□□ 0.03
TRIM65-202ENST00000540128 LOC100131303A0A0U1RQF7 123 aa15.22■□□□□ 0.03
TRIM65-202ENST00000540128 GATCO43716 136 aaKnown RBP15.22■□□□□ 0.03
TRIM65-202ENST00000540128 ERVFC1-1P60608 527 aa15.22■□□□□ 0.03
TRIM65-202ENST00000540128 CT83Q5H943 113 aa15.22■□□□□ 0.03
TRIM65-202ENST00000540128 SOHLH1Q5JUK2 328 aa15.22■□□□□ 0.03
TRIM65-202ENST00000540128 LYPD5Q6UWN5 251 aa15.22■□□□□ 0.03
TRIM65-202ENST00000540128 OSTCQ9NRP0 149 aa15.22■□□□□ 0.03
TRIM65-202ENST00000540128 NAT8Q9UHE5 227 aa15.22■□□□□ 0.03
TRIM65-202ENST00000540128 CTRLP40313 264 aa15.21■□□□□ 0.03
TRIM65-202ENST00000540128 LYZL1Q6UWQ5 148 aa15.21■□□□□ 0.03
TRIM65-202ENST00000540128 CNFNQ9BYD5 112 aa15.21■□□□□ 0.03
TRIM65-202ENST00000540128 RPL23P62829 140 aaKnown RBP15.2■□□□□ 0.02
TRIM65-202ENST00000540128 FAM74A4Q5TZK3 123 aa15.2■□□□□ 0.02
TRIM65-202ENST00000540128 TPPP3Q9BW30 176 aa15.2■□□□□ 0.02
TRIM65-202ENST00000540128 KIF25-AS1Q9Y6Z4 181 aa15.2■□□□□ 0.02
TRIM65-202ENST00000540128 A8MWL6 223 aa15.19■□□□□ 0.02
TRIM65-202ENST00000540128 FOXA3P55318 350 aaPredicted RBP15.19■□□□□ 0.02
TRIM65-202ENST00000540128 TIRAPP58753 221 aa15.19■□□□□ 0.02
TRIM65-202ENST00000540128 Q6ZR54 194 aa15.19■□□□□ 0.02
TRIM65-202ENST00000540128 GTSF1Q8WW33 167 aa15.19■□□□□ 0.02
TRIM65-202ENST00000540128 ISOC2Q96AB3 205 aa15.19■□□□□ 0.02
TRIM65-202ENST00000540128 LINC00315P59091 139 aa15.18■□□□□ 0.02
TRIM65-202ENST00000540128 RAB4BP61018 213 aa15.18■□□□□ 0.02
TRIM65-202ENST00000540128 C14orf178Q8N769 122 aaPredicted RBP15.18■□□□□ 0.02
TRIM65-202ENST00000540128 Q9H8V8 135 aa15.18■□□□□ 0.02
TRIM65-202ENST00000540128 MSRB1Q9NZV6 116 aa15.18■□□□□ 0.02
TRIM65-202ENST00000540128 LINC00694P0DN24 101 aa15.17■□□□□ 0.02
TRIM65-202ENST00000540128 SSTP61278 116 aa15.17■□□□□ 0.02
TRIM65-202ENST00000540128 AP1S3Q96PC3 154 aa15.17■□□□□ 0.02
TRIM65-202ENST00000540128 NTF3P20783 257 aa15.16■□□□□ 0.02
TRIM65-202ENST00000540128 GFRA4Q9GZZ7 299 aa15.16■□□□□ 0.02
TRIM65-202ENST00000540128 Q9UF83 564 aa15.16■□□□□ 0.02
TRIM65-202ENST00000540128 IGLV2-18A0A075B6J9 118 aa15.15■□□□□ 0.02
TRIM65-202ENST00000540128 TRBV10-1A0A0K0K1A3 114 aa15.15■□□□□ 0.02
TRIM65-202ENST00000540128 FAM231BA6NCW3 169 aa15.15■□□□□ 0.02
TRIM65-202ENST00000540128 C15orf54Q8N8G6 183 aa15.15■□□□□ 0.02
TRIM65-202ENST00000540128 TSKUQ8WUA8 353 aa15.15■□□□□ 0.02
TRIM65-202ENST00000540128 V9GYV3 84 aa15.15■□□□□ 0.02
TRIM65-202ENST00000540128 ADIRFQ15847 76 aa15.14■□□□□ 0.01
TRIM65-202ENST00000540128 NBDYA0A0U1RRE5 68 aa15.13■□□□□ 0.01
TRIM65-202ENST00000540128 TRGC1P0CF51 173 aa15.13■□□□□ 0.01
TRIM65-202ENST00000540128 SMIM17P0DL12 118 aa15.13■□□□□ 0.01
TRIM65-202ENST00000540128 OR10G8Q8NGN5 311 aa15.13■□□□□ 0.01
TRIM65-202ENST00000540128 ATP6V0E2Q8NHE4 81 aa15.13■□□□□ 0.01
TRIM65-202ENST00000540128 GAGE12JA6NER3 117 aa15.12■□□□□ 0.01
TRIM65-202ENST00000540128 M0R2N4 97 aa15.12■□□□□ 0.01
TRIM65-202ENST00000540128 GAGE1Q13065 139 aa15.12■□□□□ 0.01
TRIM65-202ENST00000540128 GAGE4Q13068 117 aa15.12■□□□□ 0.01
TRIM65-202ENST00000540128 GAGE5Q13069 117 aa15.12■□□□□ 0.01
TRIM65-202ENST00000540128 GAGE13Q4V321 117 aa15.12■□□□□ 0.01
TRIM65-202ENST00000540128 EVI2AP22794 236 aa15.11■□□□□ 0.01
TRIM65-202ENST00000540128 TWIST1Q15672 202 aa15.11■□□□□ 0.01
TRIM65-202ENST00000540128 ZNF56Q15929 161 aa15.11■□□□□ 0.01
TRIM65-202ENST00000540128 UQCC3Q6UW78 93 aa15.11■□□□□ 0.01
TRIM65-202ENST00000540128 GTSF1LQ9H1H1 148 aa15.11■□□□□ 0.01
TRIM65-202ENST00000540128 PGLYRP4Q96LB8 373 aa15.1■□□□□ 0.01
TRIM65-202ENST00000540128 HIGD1CA8MV81 97 aa15.09■□□□□ 0.01
TRIM65-202ENST00000540128 F5H697 171 aa15.09■□□□□ 0.01
TRIM65-202ENST00000540128 SIVA1O15304 175 aa15.09■□□□□ 0.01
TRIM65-202ENST00000540128 DPH3P1Q9H4G8 78 aa15.09■□□□□ 0.01
TRIM65-202ENST00000540128 TRBV7-3A0A075B6L6 115 aa15.08■□□□□ 0
TRIM65-202ENST00000540128 RPL36AP83881 106 aaKnown RBP15.08■□□□□ 0
TRIM65-202ENST00000540128 RPL36ALQ969Q0 106 aaKnown RBP15.08■□□□□ 0
TRIM65-202ENST00000540128 M0QY20 66 aa15.07■□□□□ 0
TRIM65-202ENST00000540128 UBE2D3P61077 147 aa15.07■□□□□ 0
TRIM65-202ENST00000540128 UBE2D2P62837 147 aa15.07■□□□□ 0
TRIM65-202ENST00000540128 LELP1Q5T871 98 aa15.07■□□□□ 0
TRIM65-202ENST00000540128 PNRC1Q12796 327 aaPredicted RBP15.06■□□□□ 0
TRIM65-202ENST00000540128 TTC32Q5I0X7 151 aa15.06■□□□□ 0
TRIM65-202ENST00000540128 NEXN-AS1Q8NBZ9 246 aa15.06■□□□□ 0
TRIM65-202ENST00000540128 A0A1B0GUT8 65 aa15.05■□□□□ -0
TRIM65-202ENST00000540128 SMIM27A0A1W2PRY6 76 aa15.05■□□□□ -0
TRIM65-202ENST00000540128 DNAH10OSP0CZ25 163 aa15.05■□□□□ -0
TRIM65-202ENST00000540128 NUP35Q8NFH5 326 aa15.05■□□□□ -0
TRIM65-202ENST00000540128 BORCS7Q96B45 105 aa15.05■□□□□ -0
TRIM65-202ENST00000540128 KRTAP1-5Q9BYS1 174 aa15.05■□□□□ -0
TRIM65-202ENST00000540128 LINC00862A6NCI5 91 aa15.04■□□□□ -0
TRIM65-202ENST00000540128 H7C1H1 209 aa15.04■□□□□ -0
TRIM65-202ENST00000540128 MGPP08493 103 aa15.04■□□□□ -0
TRIM65-202ENST00000540128 BTF3P20290 206 aaKnown RBP15.04■□□□□ -0
TRIM65-202ENST00000540128 SUMO4Q6EEV6 95 aa15.04■□□□□ -0
TRIM65-202ENST00000540128 WFDC10BQ8IUB3 73 aa15.04■□□□□ -0
TRIM65-202ENST00000540128 NAT8BQ9UHF3 227 aa15.04■□□□□ -0
TRIM65-202ENST00000540128 A0A087WWC5 75 aa15.03■□□□□ -0
TRIM65-202ENST00000540128 TRAV8-6A0A0B4J262 113 aa15.03■□□□□ -0
TRIM65-202ENST00000540128 TMEM218A2RU14 115 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms