RNA–Protein interactions for RNA: ENST00000538845.5

GTF2H3-206, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 5

Gene GTF2H3, Length 663 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-206ENST00000538845 UGGT2Q9NYU1 1516 aa1.91□□□□□ -2.1
GTF2H3-206ENST00000538845 IQGAP2Q13576 1575 aa1.9□□□□□ -2.1
GTF2H3-206ENST00000538845 NRKQ7Z2Y5 1582 aa1.9□□□□□ -2.1
GTF2H3-206ENST00000538845 POLA1P09884 1462 aaPredicted RBP1.9□□□□□ -2.11
GTF2H3-206ENST00000538845 PTPRMP28827 1452 aa1.9□□□□□ -2.11
GTF2H3-206ENST00000538845 TCHHQ07283 1943 aa1.9□□□□□ -2.11
GTF2H3-206ENST00000538845 KTN1Q86UP2 1357 aaKnown RBP1.9□□□□□ -2.11
GTF2H3-206ENST00000538845 AFDNP55196 1824 aaKnown RBP1.9□□□□□ -2.11
GTF2H3-206ENST00000538845 IGKV2-40A0A087WW87 121 aaPredicted RBP1.9□□□□□ -2.11
GTF2H3-206ENST00000538845 TRBV6-7A0A0A0MS04 114 aa1.9□□□□□ -2.11
GTF2H3-206ENST00000538845 TRBV10-1A0A0K0K1A3 114 aa1.9□□□□□ -2.11
GTF2H3-206ENST00000538845 NUPR2A6NF83 97 aa1.9□□□□□ -2.11
GTF2H3-206ENST00000538845 NDUFB6O95139 128 aa1.9□□□□□ -2.11
GTF2H3-206ENST00000538845 IGKV2D-40P01614 121 aaPredicted RBP1.9□□□□□ -2.11
GTF2H3-206ENST00000538845 PIRTP0C851 137 aa1.9□□□□□ -2.11
GTF2H3-206ENST00000538845 Q56UQ5 140 aa1.9□□□□□ -2.11
GTF2H3-206ENST00000538845 SPRNQ5BIV9 151 aa1.9□□□□□ -2.11
GTF2H3-206ENST00000538845 Q6AWC8 147 aa1.9□□□□□ -2.11
GTF2H3-206ENST00000538845 CSAG1Q6PB30 78 aa1.9□□□□□ -2.11
GTF2H3-206ENST00000538845 TMEM242Q9NWH2 141 aa1.9□□□□□ -2.11
GTF2H3-206ENST00000538845 RNF17Q9BXT8 1623 aaKnown RBP1.9□□□□□ -2.11
GTF2H3-206ENST00000538845 PLXNA1Q9UIW2 1896 aa1.9□□□□□ -2.11
GTF2H3-206ENST00000538845 CCDC18Q5T9S5 1454 aa1.89□□□□□ -2.11
GTF2H3-206ENST00000538845 LRRC9Q6ZRR7 1453 aa1.89□□□□□ -2.11
GTF2H3-206ENST00000538845 MYO5CQ9NQX4 1742 aa1.89□□□□□ -2.11
GTF2H3-206ENST00000538845 KDM6BO15054 1643 aa1.89□□□□□ -2.11
GTF2H3-206ENST00000538845 IGKV3-7A0A075B6H7 116 aa1.89□□□□□ -2.11
GTF2H3-206ENST00000538845 CXorf51AA0A1B0GTR3 108 aa1.89□□□□□ -2.11
GTF2H3-206ENST00000538845 SPAARA0A1B0GVQ0 90 aa1.89□□□□□ -2.11
GTF2H3-206ENST00000538845 C20orf202A1L168 122 aa1.89□□□□□ -2.11
GTF2H3-206ENST00000538845 IGLV3-1P01715 115 aa1.89□□□□□ -2.11
GTF2H3-206ENST00000538845 IL7P13232 177 aa1.89□□□□□ -2.11
GTF2H3-206ENST00000538845 TPPP2P59282 170 aa1.89□□□□□ -2.11
GTF2H3-206ENST00000538845 KRTAP12-1P59990 96 aa1.89□□□□□ -2.11
GTF2H3-206ENST00000538845 KRTAP21-2Q3LI59 83 aa1.89□□□□□ -2.11
GTF2H3-206ENST00000538845 SPATA45Q537H7 98 aa1.89□□□□□ -2.11
GTF2H3-206ENST00000538845 C12orf73Q69YU5 71 aa1.89□□□□□ -2.11
GTF2H3-206ENST00000538845 MRPL57Q9BQC6 102 aaKnown RBP1.89□□□□□ -2.11
GTF2H3-206ENST00000538845 LIMD2Q9BT23 127 aa1.89□□□□□ -2.11
GTF2H3-206ENST00000538845 ATG5Q9H1Y0 275 aa1.89□□□□□ -2.11
GTF2H3-206ENST00000538845 URB2Q14146 1524 aaKnown RBP1.89□□□□□ -2.11
GTF2H3-206ENST00000538845 PATJQ8NI35 1801 aa1.89□□□□□ -2.11
GTF2H3-206ENST00000538845 FANCD2Q9BXW9 1451 aa1.88□□□□□ -2.11
GTF2H3-206ENST00000538845 SNRNP200O75643 2136 aaKnown RBP1.88□□□□□ -2.11
GTF2H3-206ENST00000538845 LAMC1P11047 1609 aa1.88□□□□□ -2.11
GTF2H3-206ENST00000538845 PREX2Q70Z35 1606 aa1.88□□□□□ -2.11
GTF2H3-206ENST00000538845 RAPGEF6Q8TEU7 1601 aa1.88□□□□□ -2.11
GTF2H3-206ENST00000538845 MAGI3Q5TCQ9 1506 aa1.88□□□□□ -2.11
GTF2H3-206ENST00000538845 KDM5DQ9BY66 1539 aa1.88□□□□□ -2.11
GTF2H3-206ENST00000538845 MCRIP1C9JLW8 97 aa1.88□□□□□ -2.11
GTF2H3-206ENST00000538845 SNAPC5O75971 98 aa1.88□□□□□ -2.11
GTF2H3-206ENST00000538845 SMIM6P0DI80 62 aa1.88□□□□□ -2.11
GTF2H3-206ENST00000538845 PPP3R1P63098 170 aa1.88□□□□□ -2.11
GTF2H3-206ENST00000538845 TMEM141Q96I45 108 aa1.88□□□□□ -2.11
GTF2H3-206ENST00000538845 C14orf144Q96I85 54 aa1.88□□□□□ -2.11
GTF2H3-206ENST00000538845 PPP3R2Q96LZ3 170 aa1.88□□□□□ -2.11
GTF2H3-206ENST00000538845 WFDC10AQ9H1F0 79 aa1.88□□□□□ -2.11
GTF2H3-206ENST00000538845 MRPL36Q9P0J6 103 aaKnown RBP1.88□□□□□ -2.11
GTF2H3-206ENST00000538845 NDUFA12Q9UI09 145 aa1.88□□□□□ -2.11
GTF2H3-206ENST00000538845 IER3IP1Q9Y5U9 82 aa1.88□□□□□ -2.11
GTF2H3-206ENST00000538845 CDK12Q9NYV4 1490 aaPredicted RBP1.88□□□□□ -2.11
GTF2H3-206ENST00000538845 PIGBOS1A0A0B4J2F0 54 aa1.87□□□□□ -2.11
GTF2H3-206ENST00000538845 UNC13BO14795 1591 aa1.87□□□□□ -2.11
GTF2H3-206ENST00000538845 PLXNC1O60486 1568 aa1.87□□□□□ -2.11
GTF2H3-206ENST00000538845 SNCGO76070 127 aa1.87□□□□□ -2.11
GTF2H3-206ENST00000538845 IGKCP01834 107 aa1.87□□□□□ -2.11
GTF2H3-206ENST00000538845 SLC25A6P12236 298 aa1.87□□□□□ -2.11
GTF2H3-206ENST00000538845 SLC48A1Q6P1K1 146 aa1.87□□□□□ -2.11
GTF2H3-206ENST00000538845 CASKIN1Q8WXD9 1431 aa1.87□□□□□ -2.11
GTF2H3-206ENST00000538845 ODF3Q96PU9 254 aa1.87□□□□□ -2.11
GTF2H3-206ENST00000538845 RPRMQ9NS64 109 aa1.87□□□□□ -2.11
GTF2H3-206ENST00000538845 MRPL35Q9NZE8 188 aaKnown RBP1.87□□□□□ -2.11
GTF2H3-206ENST00000538845 KIAA0100Q14667 2235 aaKnown RBP1.87□□□□□ -2.11
GTF2H3-206ENST00000538845 SDK1Q7Z5N4 2213 aa1.87□□□□□ -2.11
GTF2H3-206ENST00000538845 SHROOM2Q13796 1616 aa1.87□□□□□ -2.11
GTF2H3-206ENST00000538845 PZPP20742 1482 aa1.87□□□□□ -2.11
GTF2H3-206ENST00000538845 NCOA2Q15596 1464 aa1.87□□□□□ -2.11
GTF2H3-206ENST00000538845 TEX14Q8IWB6 1497 aa1.87□□□□□ -2.11
GTF2H3-206ENST00000538845 SHANK2Q9UPX8 1470 aa1.87□□□□□ -2.11
GTF2H3-206ENST00000538845 HFM1A2PYH4 1435 aa1.86□□□□□ -2.11
GTF2H3-206ENST00000538845 APOC4-APOC2K7ER74 178 aa1.86□□□□□ -2.11
GTF2H3-206ENST00000538845 KLF7O75840 302 aaPredicted RBP1.86□□□□□ -2.11
GTF2H3-206ENST00000538845 APOC2P02655 101 aa1.86□□□□□ -2.11
GTF2H3-206ENST00000538845 DEFB119Q8N690 84 aa1.86□□□□□ -2.11
GTF2H3-206ENST00000538845 TET1Q8NFU7 2136 aa1.86□□□□□ -2.11
GTF2H3-206ENST00000538845 DOCK2Q92608 1830 aa1.86□□□□□ -2.11
GTF2H3-206ENST00000538845 RREB1Q92766 1687 aa1.86□□□□□ -2.11
GTF2H3-206ENST00000538845 DOCK1Q14185 1865 aa1.86□□□□□ -2.11
GTF2H3-206ENST00000538845 CHD1O14646 1710 aa1.86□□□□□ -2.11
GTF2H3-206ENST00000538845 SPHKAPQ2M3C7 1700 aa1.86□□□□□ -2.11
GTF2H3-206ENST00000538845 IFT172Q9UG01 1749 aa1.86□□□□□ -2.11
GTF2H3-206ENST00000538845 CCNB3Q8WWL7 1395 aa1.85□□□□□ -2.11
GTF2H3-206ENST00000538845 ABCA8O94911 1581 aa1.85□□□□□ -2.11
GTF2H3-206ENST00000538845 ARHGEF5Q12774 1597 aa1.85□□□□□ -2.11
GTF2H3-206ENST00000538845 INO80Q9ULG1 1556 aaPredicted RBP1.85□□□□□ -2.11
GTF2H3-206ENST00000538845 MAST1Q9Y2H9 1570 aa1.85□□□□□ -2.11
GTF2H3-206ENST00000538845 DEPDC5O75140 1603 aa1.85□□□□□ -2.11
GTF2H3-206ENST00000538845 SPAG17Q6Q759 2223 aa1.85□□□□□ -2.11
GTF2H3-206ENST00000538845 TRAV23DV6A0A075B6W5 121 aa1.85□□□□□ -2.11
GTF2H3-206ENST00000538845 J3QKU1 62 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms