RNA–Protein interactions for RNA: ENST00000538845.5

GTF2H3-206, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 5

Gene GTF2H3, Length 663 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-206ENST00000538845 AEBP2Q6ZN18 517 aaPredicted RBP24.51■■□□□ 1.51
GTF2H3-206ENST00000538845 CHIC1Q5VXU3 224 aa23.12■■□□□ 1.29
GTF2H3-206ENST00000538845 SENP3Q9H4L4 574 aaPredicted RBP20.78■□□□□ 0.92
GTF2H3-206ENST00000538845 PHF23Q9BUL5 403 aaPredicted RBP20.58■□□□□ 0.89
GTF2H3-206ENST00000538845 FOXD1Q16676 465 aa19.47■□□□□ 0.71
GTF2H3-206ENST00000538845 PLPPR3Q6T4P5 718 aa18.39■□□□□ 0.53
GTF2H3-206ENST00000538845 PPP6R1Q9UPN7 881 aa18.21■□□□□ 0.51
GTF2H3-206ENST00000538845 MSH5O43196 834 aa18.14■□□□□ 0.49
GTF2H3-206ENST00000538845 PIAS4Q8N2W9 510 aaPredicted RBP18.13■□□□□ 0.49
GTF2H3-206ENST00000538845 ADRA2BP18089 450 aa18.12■□□□□ 0.49
GTF2H3-206ENST00000538845 POTEDQ86YR6 584 aa17.92■□□□□ 0.46
GTF2H3-206ENST00000538845 MAPK8IP2Q13387 824 aaPredicted RBP16.69■□□□□ 0.26
GTF2H3-206ENST00000538845 DMRT2Q9Y5R5 561 aa16.5■□□□□ 0.23
GTF2H3-206ENST00000538845 SCAF1Q9H7N4 1312 aaKnown RBP16.43■□□□□ 0.22
GTF2H3-206ENST00000538845 PPP4R3CPQ6ZMV5 832 aa16.17■□□□□ 0.18
GTF2H3-206ENST00000538845 HOXD11P31277 338 aaPredicted RBP15.87■□□□□ 0.13
GTF2H3-206ENST00000538845 DCAF8L1A6NGE4 600 aa15.83■□□□□ 0.12
GTF2H3-206ENST00000538845 CNKSR2Q8WXI2 1034 aa15.83■□□□□ 0.12
GTF2H3-206ENST00000538845 RNF216Q9NWF9 866 aaPredicted RBP15.71■□□□□ 0.11
GTF2H3-206ENST00000538845 CACNB1Q02641 598 aaPredicted RBP15.65■□□□□ 0.1
GTF2H3-206ENST00000538845 RNF39Q9H2S5 420 aa15.54■□□□□ 0.08
GTF2H3-206ENST00000538845 NCBP3Q53F19 620 aaKnown RBP15.44■□□□□ 0.06
GTF2H3-206ENST00000538845 NPM3O75607 178 aaKnown RBP15.31■□□□□ 0.04
GTF2H3-206ENST00000538845 DNAJC5BQ9UF47 199 aa15.27■□□□□ 0.04
GTF2H3-206ENST00000538845 C1QBPQ07021 282 aaKnown RBP15.25■□□□□ 0.03
GTF2H3-206ENST00000538845 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.1■□□□□ 0.01
GTF2H3-206ENST00000538845 KCNA4P22459 653 aa14.99□□□□□ -0.01
GTF2H3-206ENST00000538845 U3KPZ7 1027 aaPredicted RBP14.82□□□□□ -0.04
GTF2H3-206ENST00000538845 SLC4A2P04920 1241 aa14.68□□□□□ -0.06
GTF2H3-206ENST00000538845 SPINK5Q9NQ38 1064 aaPredicted RBP14.66□□□□□ -0.06
GTF2H3-206ENST00000538845 CAPN15O75808 1086 aa14.57□□□□□ -0.08
GTF2H3-206ENST00000538845 DSG3P32926 999 aa14.53□□□□□ -0.08
GTF2H3-206ENST00000538845 TRHP20396 242 aaPredicted RBP14.34□□□□□ -0.11
GTF2H3-206ENST00000538845 ABCB7O75027 752 aa14.28□□□□□ -0.12
GTF2H3-206ENST00000538845 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.25□□□□□ -0.13
GTF2H3-206ENST00000538845 HNRNPUL2Q1KMD3 747 aaKnown RBP14.25□□□□□ -0.13
GTF2H3-206ENST00000538845 ZNF219Q9P2Y4 722 aaPredicted RBP14.24□□□□□ -0.13
GTF2H3-206ENST00000538845 APLP2Q06481 763 aa14.23□□□□□ -0.13
GTF2H3-206ENST00000538845 SAMD1Q6SPF0 538 aaPredicted RBP14.2□□□□□ -0.14
GTF2H3-206ENST00000538845 MYCNP04198 464 aaPredicted RBP14.09□□□□□ -0.15
GTF2H3-206ENST00000538845 SLC4A1APQ9BWU0 796 aaKnown RBP14.07□□□□□ -0.16
GTF2H3-206ENST00000538845 POTEHQ6S545 545 aa14□□□□□ -0.17
GTF2H3-206ENST00000538845 POLA2Q14181 598 aa13.96□□□□□ -0.17
GTF2H3-206ENST00000538845 FOXD4L1Q9NU39 408 aa13.93□□□□□ -0.18
GTF2H3-206ENST00000538845 ATF5Q9Y2D1 282 aaPredicted RBP13.91□□□□□ -0.18
GTF2H3-206ENST00000538845 ZBTB22O15209 634 aa13.82□□□□□ -0.2
GTF2H3-206ENST00000538845 RBM42Q9BTD8 480 aaKnown RBP13.76□□□□□ -0.21
GTF2H3-206ENST00000538845 CHRDL2Q6WN34 429 aa13.57□□□□□ -0.24
GTF2H3-206ENST00000538845 ZBTB12Q9Y330 459 aaPredicted RBP13.54□□□□□ -0.24
GTF2H3-206ENST00000538845 OSCARQ8IYS5 282 aa13.51□□□□□ -0.25
GTF2H3-206ENST00000538845 AKT1S1Q96B36 256 aa13.48□□□□□ -0.25
GTF2H3-206ENST00000538845 ATXN8OSP0DMR3 200 aa13.47□□□□□ -0.25
GTF2H3-206ENST00000538845 REM2Q8IYK8 340 aaPredicted RBP13.4□□□□□ -0.26
GTF2H3-206ENST00000538845 PITPNM1O00562 1244 aa13.27□□□□□ -0.29
GTF2H3-206ENST00000538845 PIP4P2Q8N4L2 257 aa13.26□□□□□ -0.29
GTF2H3-206ENST00000538845 MKRN4PQ13434 485 aaPredicted RBP13.25□□□□□ -0.29
GTF2H3-206ENST00000538845 FBLN2P98095 1184 aa13.21□□□□□ -0.29
GTF2H3-206ENST00000538845 SPDYE2BA6NHP3 402 aa13.18□□□□□ -0.3
GTF2H3-206ENST00000538845 SPDYE6P0CI01 402 aa13.18□□□□□ -0.3
GTF2H3-206ENST00000538845 SPDYE2Q495Y8 402 aa13.18□□□□□ -0.3
GTF2H3-206ENST00000538845 FXR2P51116 673 aaKnown RBP eCLIP13.16□□□□□ -0.3
GTF2H3-206ENST00000538845 CSRNP3Q8WYN3 585 aa13.09□□□□□ -0.31
GTF2H3-206ENST00000538845 SP7Q8TDD2 431 aaPredicted RBP13.08□□□□□ -0.32
GTF2H3-206ENST00000538845 ZNF692Q9BU19 519 aaPredicted RBP13.03□□□□□ -0.32
GTF2H3-206ENST00000538845 SSUH2Q9Y2M2 353 aa13.03□□□□□ -0.32
GTF2H3-206ENST00000538845 HAX1O00165 279 aa13.01□□□□□ -0.33
GTF2H3-206ENST00000538845 CLEC11AQ9Y240 323 aa12.98□□□□□ -0.33
GTF2H3-206ENST00000538845 EVX2Q03828 476 aa12.96□□□□□ -0.33
GTF2H3-206ENST00000538845 SPDYE1Q8NFV5 336 aaPredicted RBP12.95□□□□□ -0.34
GTF2H3-206ENST00000538845 PRKAR2AP13861 404 aaKnown RBP12.91□□□□□ -0.34
GTF2H3-206ENST00000538845 PABPN1Q86U42 306 aaKnown RBP eCLIP12.86□□□□□ -0.35
GTF2H3-206ENST00000538845 EHMT2Q96KQ7 1210 aa12.86□□□□□ -0.35
GTF2H3-206ENST00000538845 CHADLQ6NUI6 762 aa12.79□□□□□ -0.36
GTF2H3-206ENST00000538845 C19orf67A6NJJ6 358 aa12.74□□□□□ -0.37
GTF2H3-206ENST00000538845 PRR29P0C7W0 189 aa12.74□□□□□ -0.37
GTF2H3-206ENST00000538845 GABBR2O75899 941 aa12.58□□□□□ -0.4
GTF2H3-206ENST00000538845 FARP1Q9Y4F1 1045 aaPredicted RBP12.55□□□□□ -0.4
GTF2H3-206ENST00000538845 SPDYE4A6NLX3 237 aa12.51□□□□□ -0.41
GTF2H3-206ENST00000538845 CD44P16070 742 aaKnown RBP12.48□□□□□ -0.41
GTF2H3-206ENST00000538845 CREBZFQ9NS37 354 aa12.46□□□□□ -0.41
GTF2H3-206ENST00000538845 STAG3Q9UJ98 1225 aa12.41□□□□□ -0.42
GTF2H3-206ENST00000538845 POTEIP0CG38 1075 aa12.36□□□□□ -0.43
GTF2H3-206ENST00000538845 ZRANB1Q9UGI0 708 aa12.31□□□□□ -0.44
GTF2H3-206ENST00000538845 LHX8Q68G74 356 aa12.28□□□□□ -0.44
GTF2H3-206ENST00000538845 ZNF579Q8NAF0 562 aaKnown RBP12.28□□□□□ -0.44
GTF2H3-206ENST00000538845 MNX1P50219 401 aaPredicted RBP12.26□□□□□ -0.45
GTF2H3-206ENST00000538845 CLCN6P51797 869 aa12.22□□□□□ -0.45
GTF2H3-206ENST00000538845 PROM2Q8N271 834 aa12.22□□□□□ -0.45
GTF2H3-206ENST00000538845 GALR2O43603 387 aaPredicted RBP12.19□□□□□ -0.46
GTF2H3-206ENST00000538845 DCBLD2Q96PD2 775 aa12.17□□□□□ -0.46
GTF2H3-206ENST00000538845 PHF12Q96QT6 1004 aa12.16□□□□□ -0.46
GTF2H3-206ENST00000538845 NPM1P06748 294 aaKnown RBP eCLIP12.13□□□□□ -0.47
GTF2H3-206ENST00000538845 PAK3O75914 559 aaPredicted RBP12.09□□□□□ -0.47
GTF2H3-206ENST00000538845 PELP1Q8IZL8 1130 aaKnown RBP12□□□□□ -0.49
GTF2H3-206ENST00000538845 TSPYL2Q9H2G4 693 aaPredicted RBP11.99□□□□□ -0.49
GTF2H3-206ENST00000538845 POTEB2H3BUK9 544 aa11.98□□□□□ -0.49
GTF2H3-206ENST00000538845 MS4A3Q96HJ5 214 aa11.98□□□□□ -0.49
GTF2H3-206ENST00000538845 MIER1Q8N108 512 aa11.94□□□□□ -0.5
GTF2H3-206ENST00000538845 CCDC61Q9Y6R9 512 aa11.94□□□□□ -0.5
GTF2H3-206ENST00000538845 OTUD5Q96G74 571 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms