RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 NTN5Q8WTR8 489 aaPredicted RBP12.98□□□□□ -0.33
SCARB1-205ENST00000538291 TTC28Q96AY4 2481 aa12.97□□□□□ -0.33
SCARB1-205ENST00000538291 NDUFB1O75438 58 aa12.97□□□□□ -0.33
SCARB1-205ENST00000538291 TRACP01848 142 aa12.97□□□□□ -0.33
SCARB1-205ENST00000538291 TSC2P49815 1807 aa12.97□□□□□ -0.33
SCARB1-205ENST00000538291 H0YGX0 51 aa12.97□□□□□ -0.33
SCARB1-205ENST00000538291 C4orf48Q5BLP8 95 aa12.97□□□□□ -0.33
SCARB1-205ENST00000538291 Q6ZSR3 168 aa12.97□□□□□ -0.33
SCARB1-205ENST00000538291 C9orf47Q6ZRZ4 202 aa12.97□□□□□ -0.33
SCARB1-205ENST00000538291 SIRPDQ9H106 197 aa12.97□□□□□ -0.33
SCARB1-205ENST00000538291 DEFB4AO15263 64 aa12.96□□□□□ -0.33
SCARB1-205ENST00000538291 CRYBA4P53673 196 aa12.96□□□□□ -0.33
SCARB1-205ENST00000538291 OPRPNQ99935 248 aaPredicted RBP12.96□□□□□ -0.33
SCARB1-205ENST00000538291 HIVEP2P31629 2446 aa12.96□□□□□ -0.34
SCARB1-205ENST00000538291 C15orf53Q8NAA6 179 aa12.96□□□□□ -0.34
SCARB1-205ENST00000538291 TEX22C9J3V5 150 aa12.96□□□□□ -0.34
SCARB1-205ENST00000538291 MSRB1Q9NZV6 116 aa12.96□□□□□ -0.34
SCARB1-205ENST00000538291 EML6Q6ZMW3 1958 aa12.96□□□□□ -0.34
SCARB1-205ENST00000538291 SPRY4Q9C004 299 aa12.95□□□□□ -0.34
SCARB1-205ENST00000538291 DYSFO75923 2080 aa12.95□□□□□ -0.34
SCARB1-205ENST00000538291 LOXL1Q08397 574 aaPredicted RBP12.95□□□□□ -0.34
SCARB1-205ENST00000538291 FANCD2OSQ96PS1 177 aa12.95□□□□□ -0.34
SCARB1-205ENST00000538291 A0A1W2PNU3 283 aaPredicted RBP12.94□□□□□ -0.34
SCARB1-205ENST00000538291 IGLL5B9A064 214 aa12.94□□□□□ -0.34
SCARB1-205ENST00000538291 PLXND1Q9Y4D7 1925 aa12.94□□□□□ -0.34
SCARB1-205ENST00000538291 PRAC2D3DTV9 90 aa12.94□□□□□ -0.34
SCARB1-205ENST00000538291 DNAJC9-AS1A6NH13 148 aa12.94□□□□□ -0.34
SCARB1-205ENST00000538291 CXCL5P42830 114 aa12.94□□□□□ -0.34
SCARB1-205ENST00000538291 VSIG2Q96IQ7 327 aa12.93□□□□□ -0.34
SCARB1-205ENST00000538291 A6NDX4 124 aa12.93□□□□□ -0.34
SCARB1-205ENST00000538291 Q6ZVH6 145 aa12.93□□□□□ -0.34
SCARB1-205ENST00000538291 PCP2Q8IVA1 136 aa12.93□□□□□ -0.34
SCARB1-205ENST00000538291 CITED1Q99966 193 aa12.93□□□□□ -0.34
SCARB1-205ENST00000538291 KLK12Q9UKR0 248 aa12.93□□□□□ -0.34
SCARB1-205ENST00000538291 TMEM61Q8N0U2 210 aa12.93□□□□□ -0.34
SCARB1-205ENST00000538291 NLRC5Q86WI3 1866 aa12.93□□□□□ -0.34
SCARB1-205ENST00000538291 MED14OSP0DP75 135 aa12.93□□□□□ -0.34
SCARB1-205ENST00000538291 IGHV4-28A0A0C4DH34 117 aa12.92□□□□□ -0.34
SCARB1-205ENST00000538291 SPAG11BQ08648 103 aa12.92□□□□□ -0.34
SCARB1-205ENST00000538291 LRRC75A-AS1Q8N1F1 130 aa12.92□□□□□ -0.34
SCARB1-205ENST00000538291 H3BQ85 93 aa12.92□□□□□ -0.34
SCARB1-205ENST00000538291 PRO0255Q9UI72 69 aa12.92□□□□□ -0.34
SCARB1-205ENST00000538291 FRMPD3Q5JV73 1810 aa12.91□□□□□ -0.34
SCARB1-205ENST00000538291 Q8NA96 180 aa12.91□□□□□ -0.34
SCARB1-205ENST00000538291 LYPD6BQ8NI32 183 aa12.91□□□□□ -0.34
SCARB1-205ENST00000538291 TMEM263Q8WUH6 116 aaKnown RBP12.91□□□□□ -0.34
SCARB1-205ENST00000538291 MAJINQ3KP22 176 aa12.91□□□□□ -0.34
SCARB1-205ENST00000538291 TNFRSF13BO14836 293 aaPredicted RBP12.9□□□□□ -0.34
SCARB1-205ENST00000538291 RS1O15537 224 aa12.9□□□□□ -0.34
SCARB1-205ENST00000538291 NOTCH4Q99466 2003 aa12.9□□□□□ -0.34
SCARB1-205ENST00000538291 MUSTN1Q8IVN3 82 aa12.9□□□□□ -0.34
SCARB1-205ENST00000538291 TNCP24821 2201 aa12.89□□□□□ -0.35
SCARB1-205ENST00000538291 FAM167A-AS1Q96KT0 104 aa12.89□□□□□ -0.35
SCARB1-205ENST00000538291 MYLKQ15746 1914 aa12.89□□□□□ -0.35
SCARB1-205ENST00000538291 A0A0J9YX75 114 aa12.88□□□□□ -0.35
SCARB1-205ENST00000538291 ACYP1P07311 99 aa12.88□□□□□ -0.35
SCARB1-205ENST00000538291 RPL39P62891 51 aaKnown RBP12.88□□□□□ -0.35
SCARB1-205ENST00000538291 NDUFA11Q86Y39 141 aa12.88□□□□□ -0.35
SCARB1-205ENST00000538291 ANAPC1Q9H1A4 1944 aa12.88□□□□□ -0.35
SCARB1-205ENST00000538291 NCR3O14931 201 aa12.88□□□□□ -0.35
SCARB1-205ENST00000538291 C11orf45Q8TAV5 145 aa12.88□□□□□ -0.35
SCARB1-205ENST00000538291 PRORYQ9H606 182 aa12.88□□□□□ -0.35
SCARB1-205ENST00000538291 SPG11Q96JI7 2443 aa12.88□□□□□ -0.35
SCARB1-205ENST00000538291 PLA2G5P39877 138 aa12.87□□□□□ -0.35
SCARB1-205ENST00000538291 ODF3L1Q8IXM7 274 aa12.87□□□□□ -0.35
SCARB1-205ENST00000538291 DEFB125Q8N687 156 aa12.87□□□□□ -0.35
SCARB1-205ENST00000538291 GAGE12HA6NDE8 117 aa12.87□□□□□ -0.35
SCARB1-205ENST00000538291 UNQ9165/PRO28630Q6UXU0 137 aa12.87□□□□□ -0.35
SCARB1-205ENST00000538291 A4D1N5 150 aa12.87□□□□□ -0.35
SCARB1-205ENST00000538291 CHKB-CPT1BH3BT56 60 aa12.87□□□□□ -0.35
SCARB1-205ENST00000538291 NREPQ16612 68 aa12.87□□□□□ -0.35
SCARB1-205ENST00000538291 MAP6D1Q9H9H5 199 aa12.87□□□□□ -0.35
SCARB1-205ENST00000538291 NUP210Q8TEM1 1887 aaPredicted RBP12.86□□□□□ -0.35
SCARB1-205ENST00000538291 NACAE9PAV3 2078 aa12.86□□□□□ -0.35
SCARB1-205ENST00000538291 C14orf177Q52M58 125 aa12.86□□□□□ -0.35
SCARB1-205ENST00000538291 TRBV12-3P01733 135 aa12.86□□□□□ -0.35
SCARB1-205ENST00000538291 DEFB1P60022 68 aa12.86□□□□□ -0.35
SCARB1-205ENST00000538291 CUL9Q8IWT3 2517 aa12.85□□□□□ -0.35
SCARB1-205ENST00000538291 CCL25O15444 150 aa12.85□□□□□ -0.35
SCARB1-205ENST00000538291 RBM3P98179 157 aaKnown RBP12.85□□□□□ -0.35
SCARB1-205ENST00000538291 TRBV10-1A0A0K0K1A3 114 aa12.85□□□□□ -0.35
SCARB1-205ENST00000538291 MP68P56378 58 aa12.85□□□□□ -0.35
SCARB1-205ENST00000538291 LMO4P61968 165 aa12.85□□□□□ -0.35
SCARB1-205ENST00000538291 DIRC1Q969H9 104 aa12.85□□□□□ -0.35
SCARB1-205ENST00000538291 TMEM258P61165 79 aa12.84□□□□□ -0.35
SCARB1-205ENST00000538291 MSMPQ1L6U9 139 aa12.84□□□□□ -0.35
SCARB1-205ENST00000538291 TOMM6Q96B49 74 aa12.84□□□□□ -0.35
SCARB1-205ENST00000538291 CTRLP40313 264 aa12.84□□□□□ -0.35
SCARB1-205ENST00000538291 MDFICQ9P1T7 246 aa12.84□□□□□ -0.35
SCARB1-205ENST00000538291 DAND5Q8N907 189 aa12.83□□□□□ -0.36
SCARB1-205ENST00000538291 GTSF1Q8WW33 167 aa12.83□□□□□ -0.36
SCARB1-205ENST00000538291 E7EUB6 86 aa12.83□□□□□ -0.36
SCARB1-205ENST00000538291 BAALCQ8WXS3 180 aa12.83□□□□□ -0.36
SCARB1-205ENST00000538291 SONP18583 2426 aaKnown RBP12.83□□□□□ -0.36
SCARB1-205ENST00000538291 A0A1B0GX51 115 aa12.82□□□□□ -0.36
SCARB1-205ENST00000538291 NPSP0C0P6 89 aa12.82□□□□□ -0.36
SCARB1-205ENST00000538291 NCKAP5O14513 1909 aa12.82□□□□□ -0.36
SCARB1-205ENST00000538291 WISP2O76076 250 aa12.82□□□□□ -0.36
SCARB1-205ENST00000538291 RNF183Q96D59 192 aa12.82□□□□□ -0.36
SCARB1-205ENST00000538291 LYPD6Q86Y78 171 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms