RNA–Protein interactions for RNA: ENST00000538176.5

CCDC78-215, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,166 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-215ENST00000538176 GAGE4Q13068 117 aa14.49□□□□□ -0.09
CCDC78-215ENST00000538176 GAGE5Q13069 117 aa14.49□□□□□ -0.09
CCDC78-215ENST00000538176 GAGE13Q4V321 117 aa14.49□□□□□ -0.09
CCDC78-215ENST00000538176 GNG13Q9P2W3 67 aa14.49□□□□□ -0.09
CCDC78-215ENST00000538176 TRBV10-1A0A0K0K1A3 114 aa14.48□□□□□ -0.09
CCDC78-215ENST00000538176 LINC00694P0DN24 101 aa14.48□□□□□ -0.09
CCDC78-215ENST00000538176 RPL35P42766 123 aaKnown RBP14.48□□□□□ -0.09
CCDC78-215ENST00000538176 FAM74A4Q5TZK3 123 aa14.48□□□□□ -0.09
CCDC78-215ENST00000538176 C11orf52Q96A22 123 aa14.48□□□□□ -0.09
CCDC78-215ENST00000538176 A0A087WTM6 91 aa14.47□□□□□ -0.09
CCDC78-215ENST00000538176 IFNA1P01562 189 aa14.47□□□□□ -0.09
CCDC78-215ENST00000538176 LAGE3Q14657 143 aa14.47□□□□□ -0.09
CCDC78-215ENST00000538176 Q6ZNX1 250 aa14.47□□□□□ -0.09
CCDC78-215ENST00000538176 SMIM12Q96EX1 92 aa14.47□□□□□ -0.09
CCDC78-215ENST00000538176 SSBP4Q9BWG4 385 aaPredicted RBP14.47□□□□□ -0.09
CCDC78-215ENST00000538176 PSCAO43653 123 aa14.46□□□□□ -0.09
CCDC78-215ENST00000538176 PDE6DO43924 150 aa14.46□□□□□ -0.09
CCDC78-215ENST00000538176 OR5AL1P0C617 328 aa14.46□□□□□ -0.09
CCDC78-215ENST00000538176 TAGLN2P37802 199 aaKnown RBP14.46□□□□□ -0.09
CCDC78-215ENST00000538176 CCL20P78556 96 aa14.46□□□□□ -0.09
CCDC78-215ENST00000538176 TOR2AQ5JU69 321 aa14.45□□□□□ -0.1
CCDC78-215ENST00000538176 C14orf178Q8N769 122 aaPredicted RBP14.45□□□□□ -0.1
CCDC78-215ENST00000538176 A0A087WWL8 130 aa14.44□□□□□ -0.1
CCDC78-215ENST00000538176 SNAI2O43623 268 aa14.44□□□□□ -0.1
CCDC78-215ENST00000538176 RAB4BP61018 213 aa14.44□□□□□ -0.1
CCDC78-215ENST00000538176 RPL36AP83881 106 aaKnown RBP14.44□□□□□ -0.1
CCDC78-215ENST00000538176 MEF2BQ02080 365 aaPredicted RBP14.44□□□□□ -0.1
CCDC78-215ENST00000538176 PRR27Q6MZM9 219 aa14.44□□□□□ -0.1
CCDC78-215ENST00000538176 RPL36ALQ969Q0 106 aaKnown RBP14.44□□□□□ -0.1
CCDC78-215ENST00000538176 DAZAP1Q96EP5 407 aaKnown RBP14.44□□□□□ -0.1
CCDC78-215ENST00000538176 TM2D2Q9BX73 214 aa14.44□□□□□ -0.1
CCDC78-215ENST00000538176 BIN3Q9NQY0 253 aa14.44□□□□□ -0.1
CCDC78-215ENST00000538176 SPANXN1Q5VSR9 72 aa14.43□□□□□ -0.1
CCDC78-215ENST00000538176 TRBV7-3A0A075B6L6 115 aa14.42□□□□□ -0.1
CCDC78-215ENST00000538176 TRAV8-3A0A0A6YYJ7 113 aa14.42□□□□□ -0.1
CCDC78-215ENST00000538176 IGHV3-30P01768 117 aa14.42□□□□□ -0.1
CCDC78-215ENST00000538176 IGHV3-33P01772 117 aa14.42□□□□□ -0.1
CCDC78-215ENST00000538176 IGHV3-30-3P0DP02 117 aa14.42□□□□□ -0.1
CCDC78-215ENST00000538176 IGHV3-30-5P0DP03 117 aa14.42□□□□□ -0.1
CCDC78-215ENST00000538176 RPS20P60866 119 aaKnown RBP14.42□□□□□ -0.1
CCDC78-215ENST00000538176 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.42□□□□□ -0.1
CCDC78-215ENST00000538176 RPL19P84098 196 aaKnown RBP14.41□□□□□ -0.1
CCDC78-215ENST00000538176 AKAP14Q86UN6 197 aa14.41□□□□□ -0.1
CCDC78-215ENST00000538176 URGCP-MRPS24S4R325 110 aa14.41□□□□□ -0.1
CCDC78-215ENST00000538176 XKRY2A2RUG3 117 aa14.4□□□□□ -0.1
CCDC78-215ENST00000538176 GNG4P50150 75 aa14.4□□□□□ -0.1
CCDC78-215ENST00000538176 CENPWQ5EE01 88 aa14.4□□□□□ -0.1
CCDC78-215ENST00000538176 OR10G8Q8NGN5 311 aa14.4□□□□□ -0.1
CCDC78-215ENST00000538176 OR10AG1Q8NH19 301 aa14.4□□□□□ -0.1
CCDC78-215ENST00000538176 KRTAP17-1Q9BYP8 105 aa14.4□□□□□ -0.1
CCDC78-215ENST00000538176 Q9UF83 564 aa14.4□□□□□ -0.1
CCDC78-215ENST00000538176 VAX2Q9UIW0 290 aa14.4□□□□□ -0.1
CCDC78-215ENST00000538176 COX11Q9Y6N1 276 aa14.4□□□□□ -0.1
CCDC78-215ENST00000538176 MAPKAPK5-AS1Q8N8E1 139 aa14.39□□□□□ -0.11
CCDC78-215ENST00000538176 CHCHD7Q9BUK0 85 aa14.39□□□□□ -0.11
CCDC78-215ENST00000538176 DERL1Q9BUN8 251 aa14.39□□□□□ -0.11
CCDC78-215ENST00000538176 MED9Q9NWA0 146 aa14.39□□□□□ -0.11
CCDC78-215ENST00000538176 SMIM17P0DL12 118 aa14.38□□□□□ -0.11
CCDC78-215ENST00000538176 BCL2P10415 239 aa14.38□□□□□ -0.11
CCDC78-215ENST00000538176 KCNIP4Q6PIL6 250 aa14.38□□□□□ -0.11
CCDC78-215ENST00000538176 NTN5Q8WTR8 489 aaPredicted RBP14.38□□□□□ -0.11
CCDC78-215ENST00000538176 Q9HAA7 133 aa14.38□□□□□ -0.11
CCDC78-215ENST00000538176 LRP1BQ9NZR2 4599 aa14.37□□□□□ -0.11
CCDC78-215ENST00000538176 UBE2D3P61077 147 aa14.37□□□□□ -0.11
CCDC78-215ENST00000538176 UBE2D2P62837 147 aa14.37□□□□□ -0.11
CCDC78-215ENST00000538176 ELOBQ15370 118 aa14.37□□□□□ -0.11
CCDC78-215ENST00000538176 ZNF56Q15929 161 aa14.37□□□□□ -0.11
CCDC78-215ENST00000538176 RYR1P21817 5038 aa14.37□□□□□ -0.11
CCDC78-215ENST00000538176 LRCOL1A6NCL2 159 aa14.36□□□□□ -0.11
CCDC78-215ENST00000538176 IGLV2-8P01709 118 aa14.36□□□□□ -0.11
CCDC78-215ENST00000538176 Q8N1X5 172 aa14.36□□□□□ -0.11
CCDC78-215ENST00000538176 RMI2Q96E14 147 aa14.36□□□□□ -0.11
CCDC78-215ENST00000538176 AP1S3Q96PC3 154 aa14.36□□□□□ -0.11
CCDC78-215ENST00000538176 C19orf71A6NCJ1 209 aa14.35□□□□□ -0.11
CCDC78-215ENST00000538176 F2Z2F3 143 aa14.35□□□□□ -0.11
CCDC78-215ENST00000538176 CACNG7P62955 275 aa14.35□□□□□ -0.11
CCDC78-215ENST00000538176 BLOC1S1P78537 153 aa14.35□□□□□ -0.11
CCDC78-215ENST00000538176 TMEM97Q5BJF2 176 aa14.35□□□□□ -0.11
CCDC78-215ENST00000538176 NIT1Q86X76 327 aa14.35□□□□□ -0.11
CCDC78-215ENST00000538176 OR2D3Q8NGH3 330 aa14.35□□□□□ -0.11
CCDC78-215ENST00000538176 A0A087WX48 190 aa14.34□□□□□ -0.11
CCDC78-215ENST00000538176 RAB19A4D1S5 217 aa14.34□□□□□ -0.11
CCDC78-215ENST00000538176 F5H697 171 aa14.34□□□□□ -0.11
CCDC78-215ENST00000538176 P01737 135 aa14.34□□□□□ -0.11
CCDC78-215ENST00000538176 C9orf62Q8N4C0 152 aa14.34□□□□□ -0.11
CCDC78-215ENST00000538176 FER1L6-AS1Q8NA97 138 aa14.34□□□□□ -0.11
CCDC78-215ENST00000538176 GCSHP23434 173 aa14.33□□□□□ -0.12
CCDC78-215ENST00000538176 PKIAP61925 76 aa14.33□□□□□ -0.12
CCDC78-215ENST00000538176 DAZ4Q86SG3 579 aaKnown RBP14.33□□□□□ -0.12
CCDC78-215ENST00000538176 DAZ3Q9NR90 486 aaKnown RBP14.33□□□□□ -0.12
CCDC78-215ENST00000538176 IGLC6P0CF74 106 aa14.32□□□□□ -0.12
CCDC78-215ENST00000538176 Q8N814 137 aa14.32□□□□□ -0.12
CCDC78-215ENST00000538176 NEXN-AS1Q8NBZ9 246 aa14.32□□□□□ -0.12
CCDC78-215ENST00000538176 IGLV5-52A0A0A0MRZ9 124 aa14.31□□□□□ -0.12
CCDC78-215ENST00000538176 TRBV6-8A0A0A6YYG3 113 aa14.31□□□□□ -0.12
CCDC78-215ENST00000538176 RBFOX3A6NFN3 312 aa14.31□□□□□ -0.12
CCDC78-215ENST00000538176 H7C1H1 209 aa14.31□□□□□ -0.12
CCDC78-215ENST00000538176 KIF25-AS1Q9Y6Z4 181 aa14.31□□□□□ -0.12
CCDC78-215ENST00000538176 MUC21A0A0G2JKD1 596 aa14.3□□□□□ -0.12
CCDC78-215ENST00000538176 MUC21A0A140T8X8 626 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms