RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 SCRT2Q9NQ03 307 aa12.37□□□□□ -0.43
TNFRSF1A-209ENST00000536717 IGHV3-53P01767 116 aa12.37□□□□□ -0.43
TNFRSF1A-209ENST00000536717 ESRGQ1W209 222 aa12.37□□□□□ -0.43
TNFRSF1A-209ENST00000536717 TPPP3Q9BW30 176 aa12.37□□□□□ -0.43
TNFRSF1A-209ENST00000536717 SSBP4Q9BWG4 385 aaPredicted RBP12.37□□□□□ -0.43
TNFRSF1A-209ENST00000536717 KIAA1109Q2LD37 5005 aa12.36□□□□□ -0.43
TNFRSF1A-209ENST00000536717 A0A096LPF7 62 aa12.36□□□□□ -0.43
TNFRSF1A-209ENST00000536717 NBDYA0A0U1RRE5 68 aa12.36□□□□□ -0.43
TNFRSF1A-209ENST00000536717 A0A1W2PPQ1 181 aa12.36□□□□□ -0.43
TNFRSF1A-209ENST00000536717 SNAI2O43623 268 aa12.36□□□□□ -0.43
TNFRSF1A-209ENST00000536717 PIK3CD-AS1Q5SR53 167 aa12.36□□□□□ -0.43
TNFRSF1A-209ENST00000536717 ZFP82Q8N141 532 aa12.36□□□□□ -0.43
TNFRSF1A-209ENST00000536717 F2Z2F3 143 aa12.35□□□□□ -0.43
TNFRSF1A-209ENST00000536717 M0R381 172 aa12.35□□□□□ -0.43
TNFRSF1A-209ENST00000536717 IGLC6P0CF74 106 aa12.35□□□□□ -0.43
TNFRSF1A-209ENST00000536717 C1orf134Q5TEV5 83 aa12.35□□□□□ -0.43
TNFRSF1A-209ENST00000536717 HERC2O95714 4834 aa12.35□□□□□ -0.43
TNFRSF1A-209ENST00000536717 FHL2Q14192 279 aa12.34□□□□□ -0.43
TNFRSF1A-209ENST00000536717 SPANXN1Q5VSR9 72 aa12.34□□□□□ -0.43
TNFRSF1A-209ENST00000536717 DMRTA1Q5VZB9 504 aa12.34□□□□□ -0.43
TNFRSF1A-209ENST00000536717 OR10AG1Q8NH19 301 aa12.34□□□□□ -0.43
TNFRSF1A-209ENST00000536717 Q9H8V8 135 aa12.34□□□□□ -0.43
TNFRSF1A-209ENST00000536717 V9GYV3 84 aa12.34□□□□□ -0.43
TNFRSF1A-209ENST00000536717 TSKUQ8WUA8 353 aa12.33□□□□□ -0.44
TNFRSF1A-209ENST00000536717 UPK3BQ9BT76 320 aa12.33□□□□□ -0.44
TNFRSF1A-209ENST00000536717 TRAV4A0A0B4J268 109 aa12.32□□□□□ -0.44
TNFRSF1A-209ENST00000536717 A8MWV9 139 aa12.32□□□□□ -0.44
TNFRSF1A-209ENST00000536717 PPP1R2P9O14990 202 aa12.32□□□□□ -0.44
TNFRSF1A-209ENST00000536717 C10orf91Q5T1B1 145 aa12.32□□□□□ -0.44
TNFRSF1A-209ENST00000536717 LYZL1Q6UWQ5 148 aa12.32□□□□□ -0.44
TNFRSF1A-209ENST00000536717 OR4C5Q8NGB2 326 aa12.32□□□□□ -0.44
TNFRSF1A-209ENST00000536717 GFRA4Q9GZZ7 299 aa12.32□□□□□ -0.44
TNFRSF1A-209ENST00000536717 PRO0255Q9UI72 69 aa12.32□□□□□ -0.44
TNFRSF1A-209ENST00000536717 MUC21A0A0G2JKD1 596 aa12.32□□□□□ -0.44
TNFRSF1A-209ENST00000536717 MUC21A0A140T8X8 626 aa12.32□□□□□ -0.44
TNFRSF1A-209ENST00000536717 FAM231BA6NCW3 169 aa12.32□□□□□ -0.44
TNFRSF1A-209ENST00000536717 PAX4O43316 350 aa12.32□□□□□ -0.44
TNFRSF1A-209ENST00000536717 MT-ND4LP03901 98 aa12.32□□□□□ -0.44
TNFRSF1A-209ENST00000536717 CTRLP40313 264 aa12.32□□□□□ -0.44
TNFRSF1A-209ENST00000536717 CRYBA4P53673 196 aa12.32□□□□□ -0.44
TNFRSF1A-209ENST00000536717 CACNG7P62955 275 aa12.32□□□□□ -0.44
TNFRSF1A-209ENST00000536717 GTSF1Q8WW33 167 aa12.32□□□□□ -0.44
TNFRSF1A-209ENST00000536717 ZNF479Q96JC4 524 aa12.32□□□□□ -0.44
TNFRSF1A-209ENST00000536717 HHLA3Q9XRX5 114 aa12.32□□□□□ -0.44
TNFRSF1A-209ENST00000536717 CARHSP1Q9Y2V2 147 aaKnown RBP12.32□□□□□ -0.44
TNFRSF1A-209ENST00000536717 MRPS16Q9Y3D3 137 aaKnown RBP12.32□□□□□ -0.44
TNFRSF1A-209ENST00000536717 NXPH4O95158 308 aa12.31□□□□□ -0.44
TNFRSF1A-209ENST00000536717 SSTP61278 116 aa12.31□□□□□ -0.44
TNFRSF1A-209ENST00000536717 ANAPC16Q96DE5 110 aa12.31□□□□□ -0.44
TNFRSF1A-209ENST00000536717 HIGD1CA8MV81 97 aa12.3□□□□□ -0.44
TNFRSF1A-209ENST00000536717 RS1O15537 224 aa12.3□□□□□ -0.44
TNFRSF1A-209ENST00000536717 FOXA3P55318 350 aaPredicted RBP12.3□□□□□ -0.44
TNFRSF1A-209ENST00000536717 SLAQ13239 276 aa12.3□□□□□ -0.44
TNFRSF1A-209ENST00000536717 CFAP126Q5VTH2 177 aa12.3□□□□□ -0.44
TNFRSF1A-209ENST00000536717 BORCS7Q96B45 105 aa12.3□□□□□ -0.44
TNFRSF1A-209ENST00000536717 KRTAP1-5Q9BYS1 174 aa12.3□□□□□ -0.44
TNFRSF1A-209ENST00000536717 ICOSQ9Y6W8 199 aa12.3□□□□□ -0.44
TNFRSF1A-209ENST00000536717 TRGV4A0A0C4DH28 118 aa12.29□□□□□ -0.44
TNFRSF1A-209ENST00000536717 CIDEAO60543 219 aa12.29□□□□□ -0.44
TNFRSF1A-209ENST00000536717 WDR73Q6P4I2 378 aa12.29□□□□□ -0.44
TNFRSF1A-209ENST00000536717 C6orf223Q8N319 242 aa12.29□□□□□ -0.44
TNFRSF1A-209ENST00000536717 PGLYRP4Q96LB8 373 aa12.29□□□□□ -0.44
TNFRSF1A-209ENST00000536717 CNFNQ9BYD5 112 aa12.28□□□□□ -0.44
TNFRSF1A-209ENST00000536717 NAT8BQ9UHF3 227 aa12.28□□□□□ -0.44
TNFRSF1A-209ENST00000536717 NTF3P20783 257 aa12.27□□□□□ -0.44
TNFRSF1A-209ENST00000536717 AP1S3Q96PC3 154 aa12.27□□□□□ -0.44
TNFRSF1A-209ENST00000536717 JPT2Q9H910 190 aa12.27□□□□□ -0.44
TNFRSF1A-209ENST00000536717 SMIM27A0A1W2PRY6 76 aa12.27□□□□□ -0.45
TNFRSF1A-209ENST00000536717 RHODO00212 210 aa12.27□□□□□ -0.45
TNFRSF1A-209ENST00000536717 APOC3P02656 99 aa12.27□□□□□ -0.45
TNFRSF1A-209ENST00000536717 TWIST1Q15672 202 aa12.27□□□□□ -0.45
TNFRSF1A-209ENST00000536717 FAM74A4Q5TZK3 123 aa12.27□□□□□ -0.45
TNFRSF1A-209ENST00000536717 ZFP2Q6ZN57 461 aa12.27□□□□□ -0.45
TNFRSF1A-209ENST00000536717 TRGC1P0CF51 173 aa12.26□□□□□ -0.45
TNFRSF1A-209ENST00000536717 SMIM17P0DL12 118 aa12.26□□□□□ -0.45
TNFRSF1A-209ENST00000536717 TNP2Q05952 138 aa12.26□□□□□ -0.45
TNFRSF1A-209ENST00000536717 MRPL23Q16540 153 aaKnown RBP12.26□□□□□ -0.45
TNFRSF1A-209ENST00000536717 NUP35Q8NFH5 326 aa12.26□□□□□ -0.45
TNFRSF1A-209ENST00000536717 A0A087WWL8 130 aa12.25□□□□□ -0.45
TNFRSF1A-209ENST00000536717 IGHV3-73A0A0B4J1V6 119 aa12.25□□□□□ -0.45
TNFRSF1A-209ENST00000536717 A0A1B0GUT8 65 aa12.25□□□□□ -0.45
TNFRSF1A-209ENST00000536717 K7EQD1 137 aa12.25□□□□□ -0.45
TNFRSF1A-209ENST00000536717 TTC32Q5I0X7 151 aa12.25□□□□□ -0.45
TNFRSF1A-209ENST00000536717 SVBPQ8N300 66 aa12.25□□□□□ -0.45
TNFRSF1A-209ENST00000536717 CLRN3Q8NCR9 226 aa12.25□□□□□ -0.45
TNFRSF1A-209ENST00000536717 SAMD10Q9BYL1 202 aa12.25□□□□□ -0.45
TNFRSF1A-209ENST00000536717 CTDSP1Q9GZU7 261 aa12.25□□□□□ -0.45
TNFRSF1A-209ENST00000536717 MSRB1Q9NZV6 116 aa12.25□□□□□ -0.45
TNFRSF1A-209ENST00000536717 RHEBQ15382 184 aa12.24□□□□□ -0.45
TNFRSF1A-209ENST00000536717 LYPD5Q6UWN5 251 aa12.24□□□□□ -0.45
TNFRSF1A-209ENST00000536717 C14orf178Q8N769 122 aaPredicted RBP12.24□□□□□ -0.45
TNFRSF1A-209ENST00000536717 LRP1BQ9NZR2 4599 aa12.23□□□□□ -0.45
TNFRSF1A-209ENST00000536717 SNAPINO95295 136 aa12.23□□□□□ -0.45
TNFRSF1A-209ENST00000536717 CRYGDP07320 174 aa12.23□□□□□ -0.45
TNFRSF1A-209ENST00000536717 GYPEP15421 78 aa12.23□□□□□ -0.45
TNFRSF1A-209ENST00000536717 NEGR1Q7Z3B1 354 aa12.23□□□□□ -0.45
TNFRSF1A-209ENST00000536717 C7orf77A4D0Y5 90 aa12.22□□□□□ -0.45
TNFRSF1A-209ENST00000536717 SIVA1O15304 175 aa12.22□□□□□ -0.45
TNFRSF1A-209ENST00000536717 GATA1P15976 413 aaPredicted RBP12.22□□□□□ -0.45
TNFRSF1A-209ENST00000536717 RIGQ13278 110 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms