RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 C7orf33Q8WU49 177 aa7.65□□□□□ -1.18
SVIP-205ENST00000533774 IGHV3-64A0A075B6Q5 118 aa7.64□□□□□ -1.19
SVIP-205ENST00000533774 A0A087WWL8 130 aa7.64□□□□□ -1.19
SVIP-205ENST00000533774 SRSF9Q13242 221 aaKnown RBP eCLIP7.64□□□□□ -1.19
SVIP-205ENST00000533774 MIAQ16674 131 aa7.64□□□□□ -1.19
SVIP-205ENST00000533774 PIK3CD-AS1Q5SR53 167 aa7.64□□□□□ -1.19
SVIP-205ENST00000533774 OR5C1Q8NGR4 320 aa7.64□□□□□ -1.19
SVIP-205ENST00000533774 GTSF1Q8WW33 167 aa7.64□□□□□ -1.19
SVIP-205ENST00000533774 MBD2Q9UBB5 411 aa7.64□□□□□ -1.19
SVIP-205ENST00000533774 TRBV6-8A0A0A6YYG3 113 aa7.63□□□□□ -1.19
SVIP-205ENST00000533774 hDV102S1A0JD36 115 aa7.63□□□□□ -1.19
SVIP-205ENST00000533774 PVALBP20472 110 aaPredicted RBP7.63□□□□□ -1.19
SVIP-205ENST00000533774 SPINK6Q6UWN8 80 aa7.63□□□□□ -1.19
SVIP-205ENST00000533774 WDR61Q9GZS3 305 aaKnown RBP7.63□□□□□ -1.19
SVIP-205ENST00000533774 PRR34Q9NV39 138 aa7.63□□□□□ -1.19
SVIP-205ENST00000533774 NAP1L6A6NFF2 107 aa7.62□□□□□ -1.19
SVIP-205ENST00000533774 H3BMQ9 156 aa7.62□□□□□ -1.19
SVIP-205ENST00000533774 TMBIM6P55061 237 aa7.62□□□□□ -1.19
SVIP-205ENST00000533774 KHDC3LQ587J8 217 aa7.62□□□□□ -1.19
SVIP-205ENST00000533774 FAM74A4Q5TZK3 123 aa7.62□□□□□ -1.19
SVIP-205ENST00000533774 REG3GQ6UW15 175 aa7.62□□□□□ -1.19
SVIP-205ENST00000533774 ARL6IP6Q8N6S5 226 aa7.62□□□□□ -1.19
SVIP-205ENST00000533774 CLRN3Q8NCR9 226 aa7.62□□□□□ -1.19
SVIP-205ENST00000533774 SEC22CQ9BRL7 303 aa7.62□□□□□ -1.19
SVIP-205ENST00000533774 LINC00269Q8N2A0 174 aa7.61□□□□□ -1.19
SVIP-205ENST00000533774 LYPD6BQ8NI32 183 aa7.61□□□□□ -1.19
SVIP-205ENST00000533774 SDHCQ99643 169 aaPredicted RBP7.61□□□□□ -1.19
SVIP-205ENST00000533774 MRPS26Q9BYN8 205 aaKnown RBP7.61□□□□□ -1.19
SVIP-205ENST00000533774 OR5AC2Q9NZP5 309 aa7.61□□□□□ -1.19
SVIP-205ENST00000533774 PSG8Q9UQ74 426 aa7.61□□□□□ -1.19
SVIP-205ENST00000533774 IGLV10-54A0A075B6I4 117 aa7.6□□□□□ -1.19
SVIP-205ENST00000533774 TRBV7-3A0A075B6L6 115 aa7.6□□□□□ -1.19
SVIP-205ENST00000533774 H3BVH4 76 aa7.6□□□□□ -1.19
SVIP-205ENST00000533774 RHODO00212 210 aa7.6□□□□□ -1.19
SVIP-205ENST00000533774 S100A4P26447 101 aaKnown RBP7.6□□□□□ -1.19
SVIP-205ENST00000533774 COX6A2Q02221 97 aa7.6□□□□□ -1.19
SVIP-205ENST00000533774 SMUG1Q53HV7 270 aa7.6□□□□□ -1.19
SVIP-205ENST00000533774 FAM74A1Q5RGS3 127 aa7.6□□□□□ -1.19
SVIP-205ENST00000533774 NTM-AS1Q6ZSK4 140 aa7.6□□□□□ -1.19
SVIP-205ENST00000533774 NDFIP1Q9BT67 221 aa7.6□□□□□ -1.19
SVIP-205ENST00000533774 IL36BQ9NZH7 164 aa7.6□□□□□ -1.19
SVIP-205ENST00000533774 PTTG1O95997 202 aa7.59□□□□□ -1.19
SVIP-205ENST00000533774 TCRBP04435 133 aa7.59□□□□□ -1.19
SVIP-205ENST00000533774 TCRAP04437 139 aa7.59□□□□□ -1.19
SVIP-205ENST00000533774 RBX1P62877 108 aa7.59□□□□□ -1.19
SVIP-205ENST00000533774 RPL36AP83881 106 aaKnown RBP7.59□□□□□ -1.19
SVIP-205ENST00000533774 MAJINQ3KP22 176 aa7.59□□□□□ -1.19
SVIP-205ENST00000533774 PRNTQ86SH4 94 aa7.59□□□□□ -1.19
SVIP-205ENST00000533774 OR10G8Q8NGN5 311 aa7.59□□□□□ -1.19
SVIP-205ENST00000533774 PRSS3P2Q8NHM4 247 aa7.59□□□□□ -1.19
SVIP-205ENST00000533774 RPL36ALQ969Q0 106 aaKnown RBP7.59□□□□□ -1.19
SVIP-205ENST00000533774 SFRP2Q96HF1 295 aa7.59□□□□□ -1.19
SVIP-205ENST00000533774 CHCHD5Q9BSY4 110 aa7.59□□□□□ -1.19
SVIP-205ENST00000533774 IGKV2-24A0A0C4DH68 120 aa7.58□□□□□ -1.2
SVIP-205ENST00000533774 TRBV10-1A0A0K0K1A3 114 aa7.58□□□□□ -1.2
SVIP-205ENST00000533774 TAS2R45P59539 299 aa7.58□□□□□ -1.2
SVIP-205ENST00000533774 NEXN-AS1Q8NBZ9 246 aa7.58□□□□□ -1.2
SVIP-205ENST00000533774 KCNIP2Q9NS61 270 aa7.58□□□□□ -1.2
SVIP-205ENST00000533774 H0YIZ8 118 aa7.57□□□□□ -1.2
SVIP-205ENST00000533774 HMGB3O15347 200 aaKnown RBP7.57□□□□□ -1.2
SVIP-205ENST00000533774 ARMS2P0C7Q2 107 aa7.57□□□□□ -1.2
SVIP-205ENST00000533774 FLI1Q01543 452 aaPredicted RBP7.57□□□□□ -1.2
SVIP-205ENST00000533774 GAGE6Q13070 117 aa7.57□□□□□ -1.2
SVIP-205ENST00000533774 STPG4Q8N801 248 aa7.57□□□□□ -1.2
SVIP-205ENST00000533774 TRAV6A0A075B6T7 132 aa7.56□□□□□ -1.2
SVIP-205ENST00000533774 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.56□□□□□ -1.2
SVIP-205ENST00000533774 GRIFINA4D1Z8 144 aa7.56□□□□□ -1.2
SVIP-205ENST00000533774 C17orf112F2Z3M2 114 aa7.56□□□□□ -1.2
SVIP-205ENST00000533774 LINC00310P59036 64 aa7.56□□□□□ -1.2
SVIP-205ENST00000533774 DNLZQ5SXM8 178 aa7.56□□□□□ -1.2
SVIP-205ENST00000533774 TRIQKQ629K1 86 aa7.56□□□□□ -1.2
SVIP-205ENST00000533774 OR11H4Q8NGC9 324 aa7.56□□□□□ -1.2
SVIP-205ENST00000533774 GFRA4Q9GZZ7 299 aa7.56□□□□□ -1.2
SVIP-205ENST00000533774 VAX2Q9UIW0 290 aa7.56□□□□□ -1.2
SVIP-205ENST00000533774 A0A0U1RQV1 116 aa7.55□□□□□ -1.2
SVIP-205ENST00000533774 B4DEV8 164 aa7.55□□□□□ -1.2
SVIP-205ENST00000533774 H7C1H1 209 aa7.55□□□□□ -1.2
SVIP-205ENST00000533774 PLA2G10O15496 165 aa7.55□□□□□ -1.2
SVIP-205ENST00000533774 CRIP1P50238 77 aa7.55□□□□□ -1.2
SVIP-205ENST00000533774 RAB5CP51148 216 aa7.55□□□□□ -1.2
SVIP-205ENST00000533774 REG3AQ06141 175 aa7.55□□□□□ -1.2
SVIP-205ENST00000533774 ZFP69Q49AA0 526 aa7.55□□□□□ -1.2
SVIP-205ENST00000533774 PQLC2Q6ZP29 291 aa7.55□□□□□ -1.2
SVIP-205ENST00000533774 C15orf56Q8N910 161 aa7.55□□□□□ -1.2
SVIP-205ENST00000533774 C5orf17Q8NAS9 161 aa7.55□□□□□ -1.2
SVIP-205ENST00000533774 A0A096LNI7 61 aa7.54□□□□□ -1.2
SVIP-205ENST00000533774 TRAV34A0A0B4J273 112 aa7.54□□□□□ -1.2
SVIP-205ENST00000533774 SERTM2A0A1B0GWG4 89 aa7.54□□□□□ -1.2
SVIP-205ENST00000533774 KRBOX1C9JBD0 128 aa7.54□□□□□ -1.2
SVIP-205ENST00000533774 M0R381 172 aa7.54□□□□□ -1.2
SVIP-205ENST00000533774 NDUFS6O75380 124 aaKnown RBP7.54□□□□□ -1.2
SVIP-205ENST00000533774 S100A5P33763 92 aa7.54□□□□□ -1.2
SVIP-205ENST00000533774 RAB2AP61019 212 aa7.54□□□□□ -1.2
SVIP-205ENST00000533774 PRR27Q6MZM9 219 aa7.54□□□□□ -1.2
SVIP-205ENST00000533774 C20orf203Q8NBC4 194 aa7.54□□□□□ -1.2
SVIP-205ENST00000533774 FABP5P3A8MUU1 101 aa7.53□□□□□ -1.2
SVIP-205ENST00000533774 M0R036 132 aa7.53□□□□□ -1.2
SVIP-205ENST00000533774 SIX6O95475 246 aa7.53□□□□□ -1.2
SVIP-205ENST00000533774 ARL14EPLP0DKL9 152 aa7.53□□□□□ -1.2
SVIP-205ENST00000533774 EPDR1Q9UM22 224 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms