RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 MLST8Q9BVC4 326 aa11.64□□□□□ -0.55
PHRF1-204ENST00000532550 A0A087WWL8 130 aa11.63□□□□□ -0.55
PHRF1-204ENST00000532550 C14orf178Q8N769 122 aaPredicted RBP11.63□□□□□ -0.55
PHRF1-204ENST00000532550 IBA57-AS1B1ANH7 110 aa11.62□□□□□ -0.55
PHRF1-204ENST00000532550 IGHV3-30P01768 117 aa11.62□□□□□ -0.55
PHRF1-204ENST00000532550 IGHV3-33P01772 117 aa11.62□□□□□ -0.55
PHRF1-204ENST00000532550 IGHV3-30-3P0DP02 117 aa11.62□□□□□ -0.55
PHRF1-204ENST00000532550 IGHV3-30-5P0DP03 117 aa11.62□□□□□ -0.55
PHRF1-204ENST00000532550 RPL35P42766 123 aaKnown RBP11.62□□□□□ -0.55
PHRF1-204ENST00000532550 SULT1A2P50226 295 aa11.62□□□□□ -0.55
PHRF1-204ENST00000532550 PRR27Q6MZM9 219 aa11.62□□□□□ -0.55
PHRF1-204ENST00000532550 KRTAP17-1Q9BYP8 105 aa11.62□□□□□ -0.55
PHRF1-204ENST00000532550 A0A087WTM6 91 aa11.61□□□□□ -0.55
PHRF1-204ENST00000532550 PSCAO43653 123 aa11.61□□□□□ -0.55
PHRF1-204ENST00000532550 C1QBP02746 253 aa11.61□□□□□ -0.55
PHRF1-204ENST00000532550 RPL19P84098 196 aaKnown RBP11.61□□□□□ -0.55
PHRF1-204ENST00000532550 SLC51BQ86UW2 128 aa11.61□□□□□ -0.55
PHRF1-204ENST00000532550 Q9UF83 564 aa11.61□□□□□ -0.55
PHRF1-204ENST00000532550 A0A087WWC5 75 aa11.6□□□□□ -0.55
PHRF1-204ENST00000532550 CXCL1P09341 107 aa11.6□□□□□ -0.55
PHRF1-204ENST00000532550 RYR1P21817 5038 aa11.59□□□□□ -0.55
PHRF1-204ENST00000532550 IFNA1P01562 189 aa11.59□□□□□ -0.55
PHRF1-204ENST00000532550 LINC00694P0DN24 101 aa11.59□□□□□ -0.55
PHRF1-204ENST00000532550 CDPF1Q6NVV7 123 aa11.59□□□□□ -0.55
PHRF1-204ENST00000532550 C11orf52Q96A22 123 aa11.59□□□□□ -0.55
PHRF1-204ENST00000532550 Q9HAA7 133 aa11.59□□□□□ -0.55
PHRF1-204ENST00000532550 SPANXN1Q5VSR9 72 aa11.58□□□□□ -0.56
PHRF1-204ENST00000532550 DAZAP1Q96EP5 407 aaKnown RBP11.58□□□□□ -0.56
PHRF1-204ENST00000532550 DERL1Q9BUN8 251 aa11.58□□□□□ -0.56
PHRF1-204ENST00000532550 SSBP4Q9BWG4 385 aaPredicted RBP11.58□□□□□ -0.56
PHRF1-204ENST00000532550 DNAH5Q8TE73 4624 aa11.58□□□□□ -0.56
PHRF1-204ENST00000532550 TRBV10-1A0A0K0K1A3 114 aa11.57□□□□□ -0.56
PHRF1-204ENST00000532550 PDE6DO43924 150 aa11.57□□□□□ -0.56
PHRF1-204ENST00000532550 OR5AL1P0C617 328 aa11.57□□□□□ -0.56
PHRF1-204ENST00000532550 FUSP35637 526 aaKnown RBP eCLIP11.57□□□□□ -0.56
PHRF1-204ENST00000532550 RPL36AP83881 106 aaKnown RBP11.57□□□□□ -0.56
PHRF1-204ENST00000532550 MEF2BQ02080 365 aaPredicted RBP11.57□□□□□ -0.56
PHRF1-204ENST00000532550 AKAP14Q86UN6 197 aa11.57□□□□□ -0.56
PHRF1-204ENST00000532550 MAPKAPK5-AS1Q8N8E1 139 aa11.57□□□□□ -0.56
PHRF1-204ENST00000532550 OR10AG1Q8NH19 301 aa11.57□□□□□ -0.56
PHRF1-204ENST00000532550 RPL36ALQ969Q0 106 aaKnown RBP11.57□□□□□ -0.56
PHRF1-204ENST00000532550 HSPG2P98160 4391 aa11.56□□□□□ -0.56
PHRF1-204ENST00000532550 SNAI2O43623 268 aa11.56□□□□□ -0.56
PHRF1-204ENST00000532550 RAB4BP61018 213 aa11.56□□□□□ -0.56
PHRF1-204ENST00000532550 SSTP61278 116 aa11.56□□□□□ -0.56
PHRF1-204ENST00000532550 CENPWQ5EE01 88 aa11.56□□□□□ -0.56
PHRF1-204ENST00000532550 MED9Q9NWA0 146 aa11.56□□□□□ -0.56
PHRF1-204ENST00000532550 MUC21A0A0G2JKD1 596 aa11.55□□□□□ -0.56
PHRF1-204ENST00000532550 MUC21A0A140T8X8 626 aa11.55□□□□□ -0.56
PHRF1-204ENST00000532550 RAB19A4D1S5 217 aa11.55□□□□□ -0.56
PHRF1-204ENST00000532550 GNG4P50150 75 aa11.55□□□□□ -0.56
PHRF1-204ENST00000532550 LAGE3Q14657 143 aa11.55□□□□□ -0.56
PHRF1-204ENST00000532550 ZNF56Q15929 161 aa11.55□□□□□ -0.56
PHRF1-204ENST00000532550 TM2D2Q9BX73 214 aa11.55□□□□□ -0.56
PHRF1-204ENST00000532550 URGCP-MRPS24S4R325 110 aa11.55□□□□□ -0.56
PHRF1-204ENST00000532550 hCG_2014768A0A024R1R8 64 aa11.54□□□□□ -0.56
PHRF1-204ENST00000532550 TRBV7-3A0A075B6L6 115 aa11.54□□□□□ -0.56
PHRF1-204ENST00000532550 TOR2AQ5JU69 321 aa11.54□□□□□ -0.56
PHRF1-204ENST00000532550 SMIM12Q96EX1 92 aa11.54□□□□□ -0.56
PHRF1-204ENST00000532550 VAX2Q9UIW0 290 aa11.54□□□□□ -0.56
PHRF1-204ENST00000532550 TRAV8-3A0A0A6YYJ7 113 aa11.53□□□□□ -0.56
PHRF1-204ENST00000532550 F5H697 171 aa11.53□□□□□ -0.56
PHRF1-204ENST00000532550 IGLV2-8P01709 118 aa11.53□□□□□ -0.56
PHRF1-204ENST00000532550 SMIM17P0DL12 118 aa11.53□□□□□ -0.56
PHRF1-204ENST00000532550 BCL2P10415 239 aa11.53□□□□□ -0.56
PHRF1-204ENST00000532550 TAGLN2P37802 199 aaKnown RBP11.53□□□□□ -0.56
PHRF1-204ENST00000532550 RPS20P60866 119 aaKnown RBP11.53□□□□□ -0.56
PHRF1-204ENST00000532550 DAZ4Q86SG3 579 aaKnown RBP11.53□□□□□ -0.56
PHRF1-204ENST00000532550 Q8N3U1 123 aa11.53□□□□□ -0.56
PHRF1-204ENST00000532550 OR2D3Q8NGH3 330 aa11.53□□□□□ -0.56
PHRF1-204ENST00000532550 BIN3Q9NQY0 253 aa11.53□□□□□ -0.56
PHRF1-204ENST00000532550 DAZ3Q9NR90 486 aaKnown RBP11.53□□□□□ -0.56
PHRF1-204ENST00000532550 UBE2D3P61077 147 aa11.52□□□□□ -0.57
PHRF1-204ENST00000532550 UBE2D2P62837 147 aa11.52□□□□□ -0.57
PHRF1-204ENST00000532550 C9orf62Q8N4C0 152 aa11.52□□□□□ -0.57
PHRF1-204ENST00000532550 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.52□□□□□ -0.57
PHRF1-204ENST00000532550 OR10G8Q8NGN5 311 aa11.52□□□□□ -0.57
PHRF1-204ENST00000532550 TPPP3Q9BW30 176 aa11.52□□□□□ -0.57
PHRF1-204ENST00000532550 APOBP04114 4563 aaKnown RBP11.52□□□□□ -0.57
PHRF1-204ENST00000532550 A0A1B0GVG6 124 aa11.51□□□□□ -0.57
PHRF1-204ENST00000532550 XKRY2A2RUG3 117 aa11.51□□□□□ -0.57
PHRF1-204ENST00000532550 LRCOL1A6NCL2 159 aa11.51□□□□□ -0.57
PHRF1-204ENST00000532550 GZMBP10144 247 aa11.51□□□□□ -0.57
PHRF1-204ENST00000532550 KCNIP4Q6PIL6 250 aa11.51□□□□□ -0.57
PHRF1-204ENST00000532550 NIT1Q86X76 327 aa11.51□□□□□ -0.57
PHRF1-204ENST00000532550 KRTAP4-5Q9BYR2 181 aa11.51□□□□□ -0.57
PHRF1-204ENST00000532550 A0A087WX48 190 aa11.5□□□□□ -0.57
PHRF1-204ENST00000532550 C19orf71A6NCJ1 209 aa11.5□□□□□ -0.57
PHRF1-204ENST00000532550 P01737 135 aa11.5□□□□□ -0.57
PHRF1-204ENST00000532550 GCSHP23434 173 aa11.5□□□□□ -0.57
PHRF1-204ENST00000532550 Q8N1X5 172 aa11.5□□□□□ -0.57
PHRF1-204ENST00000532550 FER1L6-AS1Q8NA97 138 aa11.5□□□□□ -0.57
PHRF1-204ENST00000532550 NEXN-AS1Q8NBZ9 246 aa11.5□□□□□ -0.57
PHRF1-204ENST00000532550 AP1S3Q96PC3 154 aa11.5□□□□□ -0.57
PHRF1-204ENST00000532550 IGLV5-52A0A0A0MRZ9 124 aa11.49□□□□□ -0.57
PHRF1-204ENST00000532550 RBFOX3A6NFN3 312 aa11.49□□□□□ -0.57
PHRF1-204ENST00000532550 BLOC1S1P78537 153 aa11.49□□□□□ -0.57
PHRF1-204ENST00000532550 NTN5Q8WTR8 489 aaPredicted RBP11.49□□□□□ -0.57
PHRF1-204ENST00000532550 COX11Q9Y6N1 276 aa11.49□□□□□ -0.57
PHRF1-204ENST00000532550 PCLOQ9Y6V0 5065 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms