RNA–Protein interactions for RNA: ENST00000532145.1

LRRK1-209, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 2

Gene LRRK1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-209ENST00000532145 TRAV12-3A0A0B4J271 114 aa10.54□□□□□ -0.72
LRRK1-209ENST00000532145 SDHAF1A6NFY7 115 aa10.54□□□□□ -0.72
LRRK1-209ENST00000532145 HERVK_113P61574 105 aa10.54□□□□□ -0.72
LRRK1-209ENST00000532145 CCL19Q99731 98 aa10.54□□□□□ -0.72
LRRK1-209ENST00000532145 NCOR2Q9Y618 2525 aa10.53□□□□□ -0.72
LRRK1-209ENST00000532145 MSMBP08118 114 aa10.53□□□□□ -0.72
LRRK1-209ENST00000532145 RPL39P62891 51 aaKnown RBP10.53□□□□□ -0.72
LRRK1-209ENST00000532145 SRSF9Q13242 221 aaKnown RBP eCLIP10.53□□□□□ -0.72
LRRK1-209ENST00000532145 SH2D6Q7Z4S9 175 aa10.53□□□□□ -0.72
LRRK1-209ENST00000532145 C9orf85Q96MD7 179 aa10.53□□□□□ -0.72
LRRK1-209ENST00000532145 A0A0J9YY99 117 aa10.53□□□□□ -0.72
LRRK1-209ENST00000532145 CLEC2AQ6UVW9 174 aa10.53□□□□□ -0.72
LRRK1-209ENST00000532145 MRPL16Q9NX20 251 aaKnown RBP10.53□□□□□ -0.72
LRRK1-209ENST00000532145 ITPR1Q14643 2758 aa10.53□□□□□ -0.72
LRRK1-209ENST00000532145 COL12A1Q99715 3063 aa10.52□□□□□ -0.72
LRRK1-209ENST00000532145 CHD8Q9HCK8 2581 aa10.52□□□□□ -0.73
LRRK1-209ENST00000532145 PSMB8P28062 276 aa10.52□□□□□ -0.73
LRRK1-209ENST00000532145 ZNF876PQ49A33 203 aa10.52□□□□□ -0.73
LRRK1-209ENST00000532145 SPTBN4Q9H254 2564 aa10.52□□□□□ -0.73
LRRK1-209ENST00000532145 IGHV4-30-2A0A087WSY4 118 aa10.52□□□□□ -0.73
LRRK1-209ENST00000532145 IGHV3-16A0A0C4DH30 117 aa10.52□□□□□ -0.73
LRRK1-209ENST00000532145 F5H697 171 aa10.52□□□□□ -0.73
LRRK1-209ENST00000532145 WFDC12Q8WWY7 111 aa10.52□□□□□ -0.73
LRRK1-209ENST00000532145 PRORYQ9H606 182 aa10.52□□□□□ -0.73
LRRK1-209ENST00000532145 EMP1P54849 157 aa10.51□□□□□ -0.73
LRRK1-209ENST00000532145 SPAG8Q99932 426 aaPredicted RBP10.51□□□□□ -0.73
LRRK1-209ENST00000532145 GAGE12HA6NDE8 117 aa10.51□□□□□ -0.73
LRRK1-209ENST00000532145 TSSC4Q9Y5U2 329 aaPredicted RBP10.51□□□□□ -0.73
LRRK1-209ENST00000532145 ZNRF2Q8NHG8 242 aa10.5□□□□□ -0.73
LRRK1-209ENST00000532145 SPATA25Q9BR10 227 aa10.5□□□□□ -0.73
LRRK1-209ENST00000532145 M0QY20 66 aa10.5□□□□□ -0.73
LRRK1-209ENST00000532145 MTURNQ8N3F0 131 aa10.5□□□□□ -0.73
LRRK1-209ENST00000532145 DEFB104AQ8WTQ1 72 aa10.5□□□□□ -0.73
LRRK1-209ENST00000532145 SIGMAR1Q99720 223 aa10.5□□□□□ -0.73
LRRK1-209ENST00000532145 MDFICQ9P1T7 246 aa10.5□□□□□ -0.73
LRRK1-209ENST00000532145 A0A0J9YX75 114 aa10.49□□□□□ -0.73
LRRK1-209ENST00000532145 TSPAN13O95857 204 aa10.49□□□□□ -0.73
LRRK1-209ENST00000532145 AVPP01185 164 aa10.49□□□□□ -0.73
LRRK1-209ENST00000532145 ATP5J2P56134 94 aa10.49□□□□□ -0.73
LRRK1-209ENST00000532145 UBE2D3P61077 147 aa10.49□□□□□ -0.73
LRRK1-209ENST00000532145 UBE2D2P62837 147 aa10.49□□□□□ -0.73
LRRK1-209ENST00000532145 TMEM95Q3KNT9 176 aa10.49□□□□□ -0.73
LRRK1-209ENST00000532145 DLX4Q92988 240 aaPredicted RBP10.49□□□□□ -0.73
LRRK1-209ENST00000532145 ZNF688P0C7X2 276 aa10.49□□□□□ -0.73
LRRK1-209ENST00000532145 TSPEAR-AS2P59090 65 aa10.49□□□□□ -0.73
LRRK1-209ENST00000532145 FAM74A4Q5TZK3 123 aa10.49□□□□□ -0.73
LRRK1-209ENST00000532145 CFAP126Q5VTH2 177 aa10.49□□□□□ -0.73
LRRK1-209ENST00000532145 SLC25A29Q8N8R3 303 aa10.49□□□□□ -0.73
LRRK1-209ENST00000532145 SYT8Q8NBV8 401 aa10.49□□□□□ -0.73
LRRK1-209ENST00000532145 AMELXQ99217 191 aa10.49□□□□□ -0.73
LRRK1-209ENST00000532145 SCGB1A1P11684 91 aa10.48□□□□□ -0.73
LRRK1-209ENST00000532145 NSUN5P1Q3KNT7 163 aa10.48□□□□□ -0.73
LRRK1-209ENST00000532145 NDUFA11Q86Y39 141 aa10.48□□□□□ -0.73
LRRK1-209ENST00000532145 Q8N1Y9 231 aa10.48□□□□□ -0.73
LRRK1-209ENST00000532145 AZU1P20160 251 aa10.48□□□□□ -0.73
LRRK1-209ENST00000532145 SNRPD3P62318 126 aaKnown RBP10.48□□□□□ -0.73
LRRK1-209ENST00000532145 TMEM170BQ5T4T1 132 aa10.48□□□□□ -0.73
LRRK1-209ENST00000532145 NFE4Q86UQ8 179 aa10.48□□□□□ -0.73
LRRK1-209ENST00000532145 TRAV12-2A0A075B6T6 113 aa10.48□□□□□ -0.73
LRRK1-209ENST00000532145 IGHV3-30P01768 117 aa10.48□□□□□ -0.73
LRRK1-209ENST00000532145 IGHV3-30-5P0DP03 117 aa10.48□□□□□ -0.73
LRRK1-209ENST00000532145 RHOHQ15669 191 aa10.48□□□□□ -0.73
LRRK1-209ENST00000532145 GTSF1LQ9H1H1 148 aa10.48□□□□□ -0.73
LRRK1-209ENST00000532145 B4DSR2 109 aa10.47□□□□□ -0.73
LRRK1-209ENST00000532145 K7EQG2 157 aa10.47□□□□□ -0.73
LRRK1-209ENST00000532145 ZNF256Q9Y2P7 627 aaPredicted RBP10.47□□□□□ -0.73
LRRK1-209ENST00000532145 IGHV1OR15-1A0A075B7D0 117 aa10.47□□□□□ -0.73
LRRK1-209ENST00000532145 TMEM89A2RUT3 159 aa10.47□□□□□ -0.73
LRRK1-209ENST00000532145 SMCPP49901 116 aaPredicted RBP10.47□□□□□ -0.73
LRRK1-209ENST00000532145 TRPT1Q86TN4 253 aaKnown RBP10.47□□□□□ -0.73
LRRK1-209ENST00000532145 ATP6V0E2Q8NHE4 81 aa10.47□□□□□ -0.73
LRRK1-209ENST00000532145 INSL3P51460 131 aa10.46□□□□□ -0.73
LRRK1-209ENST00000532145 ZNF56Q15929 161 aa10.46□□□□□ -0.73
LRRK1-209ENST00000532145 J3QQQ9 107 aa10.46□□□□□ -0.74
LRRK1-209ENST00000532145 APOMO95445 188 aa10.46□□□□□ -0.74
LRRK1-209ENST00000532145 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.45□□□□□ -0.74
LRRK1-209ENST00000532145 P0DMU3 169 aa10.45□□□□□ -0.74
LRRK1-209ENST00000532145 FAM231AP0DMU4 169 aa10.45□□□□□ -0.74
LRRK1-209ENST00000532145 FAM231CP0DMU5 169 aa10.45□□□□□ -0.74
LRRK1-209ENST00000532145 GATA3P23771 443 aa10.45□□□□□ -0.74
LRRK1-209ENST00000532145 LYRM7Q5U5X0 104 aa10.45□□□□□ -0.74
LRRK1-209ENST00000532145 C10orf99Q6UWK7 81 aa10.45□□□□□ -0.74
LRRK1-209ENST00000532145 RNF152Q8N8N0 203 aa10.45□□□□□ -0.74
LRRK1-209ENST00000532145 LOC107984156A0A0G2JMH3 177 aa10.45□□□□□ -0.74
LRRK1-209ENST00000532145 IGKV3-20P01619 116 aa10.45□□□□□ -0.74
LRRK1-209ENST00000532145 CFC1BP0CG36 223 aa10.45□□□□□ -0.74
LRRK1-209ENST00000532145 CFC1P0CG37 223 aa10.45□□□□□ -0.74
LRRK1-209ENST00000532145 ARL17AQ8IVW1 177 aa10.45□□□□□ -0.74
LRRK1-209ENST00000532145 C1QTNF4Q9BXJ3 329 aa10.45□□□□□ -0.74
LRRK1-209ENST00000532145 IGHV4-59P01825 116 aa10.44□□□□□ -0.74
LRRK1-209ENST00000532145 SPG11Q96JI7 2443 aa10.44□□□□□ -0.74
LRRK1-209ENST00000532145 CELSR2Q9HCU4 2923 aa10.44□□□□□ -0.74
LRRK1-209ENST00000532145 SMAGPQ0VAQ4 97 aa10.44□□□□□ -0.74
LRRK1-209ENST00000532145 FOXI1Q12951 378 aa10.44□□□□□ -0.74
LRRK1-209ENST00000532145 SPINK13Q1W4C9 94 aa10.44□□□□□ -0.74
LRRK1-209ENST00000532145 C20orf203Q8NBC4 194 aa10.44□□□□□ -0.74
LRRK1-209ENST00000532145 MAP1AP78559 2803 aaPredicted RBP10.43□□□□□ -0.74
LRRK1-209ENST00000532145 TMEM223A0PJW6 202 aa10.43□□□□□ -0.74
LRRK1-209ENST00000532145 LGALS3P17931 250 aaKnown RBP10.43□□□□□ -0.74
LRRK1-209ENST00000532145 PSMB2P49721 201 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms