RNA–Protein interactions for RNA: ENST00000531919.1

PATL1-202, Transcript of PAT1 homolog 1, processing body mRNA decay factor, humanhuman

TSL 5

Gene PATL1, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATL1-202ENST00000531919 F2Z2F3 143 aa-0.47□□□□□ -2.48
PATL1-202ENST00000531919 IFNA21P01568 189 aa-0.47□□□□□ -2.48
PATL1-202ENST00000531919 FABP1P07148 127 aa-0.47□□□□□ -2.48
PATL1-202ENST00000531919 SPRR2BP35325 72 aa-0.47□□□□□ -2.48
PATL1-202ENST00000531919 TFAMQ00059 246 aaKnown RBP-0.47□□□□□ -2.48
PATL1-202ENST00000531919 PLGLB1Q02325 96 aa-0.47□□□□□ -2.48
PATL1-202ENST00000531919 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-0.47□□□□□ -2.48
PATL1-202ENST00000531919 TMEM91Q6ZNR0 172 aa-0.47□□□□□ -2.48
PATL1-202ENST00000531919 SLC35B3Q9H1N7 401 aa-0.47□□□□□ -2.48
PATL1-202ENST00000531919 CENPHQ9H3R5 247 aa-0.47□□□□□ -2.48
PATL1-202ENST00000531919 COA4Q9NYJ1 87 aa-0.47□□□□□ -2.48
PATL1-202ENST00000531919 CCDC171Q6TFL3 1326 aa-0.47□□□□□ -2.48
PATL1-202ENST00000531919 EP300Q09472 2414 aaPredicted RBP-0.48□□□□□ -2.49
PATL1-202ENST00000531919 DOCK11Q5JSL3 2073 aa-0.48□□□□□ -2.49
PATL1-202ENST00000531919 ZNF670-ZNF695F2Z2N8 137 aa-0.48□□□□□ -2.49
PATL1-202ENST00000531919 NMBP08949 121 aa-0.48□□□□□ -2.49
PATL1-202ENST00000531919 HIST1H1BP16401 226 aaKnown RBP-0.48□□□□□ -2.49
PATL1-202ENST00000531919 KRTAP20-2Q3LI61 65 aa-0.48□□□□□ -2.49
PATL1-202ENST00000531919 TAS2R8Q9NYW2 309 aa-0.48□□□□□ -2.49
PATL1-202ENST00000531919 UHRF1BP1LA0JNW5 1464 aa-0.48□□□□□ -2.49
PATL1-202ENST00000531919 CREBBPQ92793 2442 aa-0.49□□□□□ -2.49
PATL1-202ENST00000531919 MT-ND4LP03901 98 aa-0.49□□□□□ -2.49
PATL1-202ENST00000531919 SLC25A6P12236 298 aa-0.49□□□□□ -2.49
PATL1-202ENST00000531919 CCL3L1P16619 93 aa-0.49□□□□□ -2.49
PATL1-202ENST00000531919 NPC2P61916 151 aa-0.49□□□□□ -2.49
PATL1-202ENST00000531919 PSPHP78330 225 aa-0.49□□□□□ -2.49
PATL1-202ENST00000531919 KRTAP19-8Q3LI54 63 aa-0.49□□□□□ -2.49
PATL1-202ENST00000531919 SMIM11BQ8TCY0 68 aa-0.49□□□□□ -2.49
PATL1-202ENST00000531919 Q96NJ1 140 aa-0.49□□□□□ -2.49
PATL1-202ENST00000531919 DDA1Q9BW61 102 aa-0.49□□□□□ -2.49
PATL1-202ENST00000531919 NRXN2Q9P2S2 1712 aa-0.5□□□□□ -2.49
PATL1-202ENST00000531919 FLNBO75369 2602 aaKnown RBP-0.5□□□□□ -2.49
PATL1-202ENST00000531919 MUC22E2RYF6 1773 aaPredicted RBP-0.5□□□□□ -2.49
PATL1-202ENST00000531919 SIPA1L3O60292 1781 aaPredicted RBP-0.5□□□□□ -2.49
PATL1-202ENST00000531919 LAMA5O15230 3695 aa-0.5□□□□□ -2.49
PATL1-202ENST00000531919 PLCE1Q9P212 2302 aa-0.5□□□□□ -2.49
PATL1-202ENST00000531919 TRAV2A0A0B4J234 112 aa-0.5□□□□□ -2.49
PATL1-202ENST00000531919 J3KT08 172 aa-0.5□□□□□ -2.49
PATL1-202ENST00000531919 CFDP00746 253 aaPredicted RBP-0.5□□□□□ -2.49
PATL1-202ENST00000531919 RPS28P62857 69 aaKnown RBP-0.5□□□□□ -2.49
PATL1-202ENST00000531919 IFI27L1Q96BM0 104 aa-0.5□□□□□ -2.49
PATL1-202ENST00000531919 CHD8Q9HCK8 2581 aa-0.5□□□□□ -2.49
PATL1-202ENST00000531919 CNOT1A5YKK6 2376 aaKnown RBP-0.5□□□□□ -2.49
PATL1-202ENST00000531919 HERC2O95714 4834 aa-0.5□□□□□ -2.49
PATL1-202ENST00000531919 TRAV36DV7A0A075B6V5 113 aa-0.51□□□□□ -2.49
PATL1-202ENST00000531919 TCRBV3S1A0A5B6 114 aa-0.51□□□□□ -2.49
PATL1-202ENST00000531919 DPM2O94777 84 aa-0.51□□□□□ -2.49
PATL1-202ENST00000531919 APOC1P02654 83 aa-0.51□□□□□ -2.49
PATL1-202ENST00000531919 MT4P47944 62 aa-0.51□□□□□ -2.49
PATL1-202ENST00000531919 OR8B8Q15620 311 aa-0.51□□□□□ -2.49
PATL1-202ENST00000531919 OR8I2Q8N0Y5 310 aa-0.51□□□□□ -2.49
PATL1-202ENST00000531919 TMEM35BQ8NCS4 154 aa-0.51□□□□□ -2.49
PATL1-202ENST00000531919 PPP1R1CQ8WVI7 109 aa-0.51□□□□□ -2.49
PATL1-202ENST00000531919 SPTA1P02549 2419 aa-0.52□□□□□ -2.49
PATL1-202ENST00000531919 NHSL1Q5SYE7 1610 aa-0.52□□□□□ -2.49
PATL1-202ENST00000531919 FLGP20930 4061 aaPredicted RBP-0.52□□□□□ -2.49
PATL1-202ENST00000531919 A0A1B0GX51 115 aa-0.52□□□□□ -2.49
PATL1-202ENST00000531919 HLA-DRB4P13762 266 aa-0.52□□□□□ -2.49
PATL1-202ENST00000531919 NDUFA11Q86Y39 141 aa-0.52□□□□□ -2.49
PATL1-202ENST00000531919 SNX29P2Q8IUI4 249 aa-0.52□□□□□ -2.49
PATL1-202ENST00000531919 DYNLRB2Q8TF09 96 aa-0.52□□□□□ -2.49
PATL1-202ENST00000531919 VPS25Q9BRG1 176 aa-0.52□□□□□ -2.49
PATL1-202ENST00000531919 CYP4F30PQ9H0H9 118 aa-0.52□□□□□ -2.49
PATL1-202ENST00000531919 BANF2Q9H503 90 aa-0.52□□□□□ -2.49
PATL1-202ENST00000531919 HLA-DRB4X5D2U9 266 aa-0.52□□□□□ -2.49
PATL1-202ENST00000531919 PRKDCP78527 4128 aaKnown RBP-0.52□□□□□ -2.49
PATL1-202ENST00000531919 ARFGEF1Q9Y6D6 1849 aa-0.52□□□□□ -2.49
PATL1-202ENST00000531919 SVEP1Q4LDE5 3571 aa-0.52□□□□□ -2.49
PATL1-202ENST00000531919 PKHD1P08F94 4074 aa-0.53□□□□□ -2.49
PATL1-202ENST00000531919 GVINP1Q7Z2Y8 2422 aa-0.53□□□□□ -2.49
PATL1-202ENST00000531919 USF3Q68DE3 2245 aa-0.53□□□□□ -2.49
PATL1-202ENST00000531919 GOLGA3Q08378 1498 aa-0.53□□□□□ -2.49
PATL1-202ENST00000531919 RBAKDNA6NC62 111 aa-0.53□□□□□ -2.49
PATL1-202ENST00000531919 PAEPP09466 180 aa-0.53□□□□□ -2.49
PATL1-202ENST00000531919 S100GP29377 79 aa-0.53□□□□□ -2.49
PATL1-202ENST00000531919 ATP6V0E2Q8NHE4 81 aa-0.53□□□□□ -2.49
PATL1-202ENST00000531919 V9GYQ6 96 aa-0.53□□□□□ -2.49
PATL1-202ENST00000531919 TGP01266 2768 aa-0.53□□□□□ -2.49
PATL1-202ENST00000531919 BIVM-ERCC5R4GMW8 1640 aa-0.53□□□□□ -2.49
PATL1-202ENST00000531919 STARD9Q9P2P6 4700 aa-0.53□□□□□ -2.49
PATL1-202ENST00000531919 PARP14Q460N5 1801 aa-0.54□□□□□ -2.5
PATL1-202ENST00000531919 URB1O60287 2271 aaKnown RBP-0.54□□□□□ -2.5
PATL1-202ENST00000531919 KIAA0100Q14667 2235 aaKnown RBP-0.54□□□□□ -2.5
PATL1-202ENST00000531919 ATRQ13535 2644 aa-0.54□□□□□ -2.5
PATL1-202ENST00000531919 TNFSF15O95150 251 aa-0.54□□□□□ -2.5
PATL1-202ENST00000531919 SCTP09683 121 aa-0.54□□□□□ -2.5
PATL1-202ENST00000531919 COX4I1P13073 169 aa-0.54□□□□□ -2.5
PATL1-202ENST00000531919 S100A5P33763 92 aa-0.54□□□□□ -2.5
PATL1-202ENST00000531919 Q5VSD8 79 aa-0.54□□□□□ -2.5
PATL1-202ENST00000531919 TMEM244Q5VVB8 128 aa-0.54□□□□□ -2.5
PATL1-202ENST00000531919 CYP2G1PQ6ZSU1 146 aa-0.54□□□□□ -2.5
PATL1-202ENST00000531919 TMEM242Q9NWH2 141 aa-0.54□□□□□ -2.5
PATL1-202ENST00000531919 LSM2Q9Y333 95 aaKnown RBP-0.54□□□□□ -2.5
PATL1-202ENST00000531919 NOP16Q9Y3C1 178 aaKnown RBP-0.54□□□□□ -2.5
PATL1-202ENST00000531919 SYNJ1O43426 1573 aa-0.54□□□□□ -2.5
PATL1-202ENST00000531919 APODP05090 189 aa-0.55□□□□□ -2.5
PATL1-202ENST00000531919 NBEAP1P0C6P0 100 aa-0.55□□□□□ -2.5
PATL1-202ENST00000531919 WFDC2Q14508 124 aa-0.55□□□□□ -2.5
PATL1-202ENST00000531919 Q6ZRX8 168 aa-0.55□□□□□ -2.5
PATL1-202ENST00000531919 C20orf197Q8N268 126 aa-0.55□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms