RNA–Protein interactions for RNA: ENST00000531226.5

PACSIN3-208, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 654 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-208ENST00000531226 SMIM7Q9BQ49 75 aa13.07□□□□□ -0.32
PACSIN3-208ENST00000531226 LY96Q9Y6Y9 160 aa13.07□□□□□ -0.32
PACSIN3-208ENST00000531226 RNASE7Q9H1E1 156 aaKnown RBP13.06□□□□□ -0.32
PACSIN3-208ENST00000531226 EPPK1P58107 5090 aaKnown RBP13.06□□□□□ -0.32
PACSIN3-208ENST00000531226 MUC21A0A0G2JKD1 596 aa13.05□□□□□ -0.32
PACSIN3-208ENST00000531226 MUC21A0A140T8X8 626 aa13.05□□□□□ -0.32
PACSIN3-208ENST00000531226 ZNF727A8MUV8 499 aa13.05□□□□□ -0.32
PACSIN3-208ENST00000531226 RPP21Q9H633 154 aaKnown RBP13.05□□□□□ -0.32
PACSIN3-208ENST00000531226 C14orf178Q8N769 122 aaPredicted RBP13.04□□□□□ -0.32
PACSIN3-208ENST00000531226 TPPP3Q9BW30 176 aa13.04□□□□□ -0.32
PACSIN3-208ENST00000531226 SIVA1O15304 175 aa13.03□□□□□ -0.32
PACSIN3-208ENST00000531226 LINC00694P0DN24 101 aa13.03□□□□□ -0.32
PACSIN3-208ENST00000531226 TIRAPP58753 221 aa13.03□□□□□ -0.32
PACSIN3-208ENST00000531226 PEA15Q15121 130 aa13.03□□□□□ -0.32
PACSIN3-208ENST00000531226 TTC32Q5I0X7 151 aa13.03□□□□□ -0.32
PACSIN3-208ENST00000531226 FAM231DQ6ZW35 169 aa13.03□□□□□ -0.32
PACSIN3-208ENST00000531226 LINC01551Q86U37 167 aa13.03□□□□□ -0.32
PACSIN3-208ENST00000531226 A0A1W2PPQ1 181 aa13.02□□□□□ -0.33
PACSIN3-208ENST00000531226 F2Z2F3 143 aa13.02□□□□□ -0.33
PACSIN3-208ENST00000531226 SSTP61278 116 aa13.02□□□□□ -0.33
PACSIN3-208ENST00000531226 CACNG7P62955 275 aa13.02□□□□□ -0.33
PACSIN3-208ENST00000531226 AP1S3Q96PC3 154 aa13.02□□□□□ -0.33
PACSIN3-208ENST00000531226 SMDT1Q9H4I9 107 aa13.02□□□□□ -0.33
PACSIN3-208ENST00000531226 GAGE12JA6NER3 117 aa13.01□□□□□ -0.33
PACSIN3-208ENST00000531226 C9JQL5 133 aa13.01□□□□□ -0.33
PACSIN3-208ENST00000531226 RTL8CO15255 209 aa13.01□□□□□ -0.33
PACSIN3-208ENST00000531226 CTRLP40313 264 aa13.01□□□□□ -0.33
PACSIN3-208ENST00000531226 SRSF3P84103 164 aaKnown RBP13.01□□□□□ -0.33
PACSIN3-208ENST00000531226 GAGE1Q13065 139 aa13.01□□□□□ -0.33
PACSIN3-208ENST00000531226 GAGE4Q13068 117 aa13.01□□□□□ -0.33
PACSIN3-208ENST00000531226 GAGE5Q13069 117 aa13.01□□□□□ -0.33
PACSIN3-208ENST00000531226 GAGE13Q4V321 117 aa13.01□□□□□ -0.33
PACSIN3-208ENST00000531226 FAM74A3Q4VXF1 159 aa13.01□□□□□ -0.33
PACSIN3-208ENST00000531226 LYZL1Q6UWQ5 148 aa13.01□□□□□ -0.33
PACSIN3-208ENST00000531226 LINC00336Q6ZUF6 198 aa13.01□□□□□ -0.33
PACSIN3-208ENST00000531226 ATP6V0E2Q8NHE4 81 aa13.01□□□□□ -0.33
PACSIN3-208ENST00000531226 KRTAP1-5Q9BYS1 174 aa13.01□□□□□ -0.33
PACSIN3-208ENST00000531226 BIRC6Q9NR09 4857 aa13□□□□□ -0.33
PACSIN3-208ENST00000531226 GATCO43716 136 aaKnown RBP13□□□□□ -0.33
PACSIN3-208ENST00000531226 RAB4BP61018 213 aa13□□□□□ -0.33
PACSIN3-208ENST00000531226 ZNF56Q15929 161 aa13□□□□□ -0.33
PACSIN3-208ENST00000531226 SOHLH1Q5JUK2 328 aa13□□□□□ -0.33
PACSIN3-208ENST00000531226 C1orf134Q5TEV5 83 aa13□□□□□ -0.33
PACSIN3-208ENST00000531226 Q9UF83 564 aa13□□□□□ -0.33
PACSIN3-208ENST00000531226 DNAH10Q8IVF4 4471 aa13□□□□□ -0.33
PACSIN3-208ENST00000531226 ERVFC1-1P60608 527 aa12.99□□□□□ -0.33
PACSIN3-208ENST00000531226 RAB14P61106 215 aa12.99□□□□□ -0.33
PACSIN3-208ENST00000531226 WFDC10BQ8IUB3 73 aa12.99□□□□□ -0.33
PACSIN3-208ENST00000531226 GTSF1LQ9H1H1 148 aa12.99□□□□□ -0.33
PACSIN3-208ENST00000531226 KIF25-AS1Q9Y6Z4 181 aa12.99□□□□□ -0.33
PACSIN3-208ENST00000531226 TRBV10-1A0A0K0K1A3 114 aa12.98□□□□□ -0.33
PACSIN3-208ENST00000531226 SMIM17P0DL12 118 aa12.98□□□□□ -0.33
PACSIN3-208ENST00000531226 CT83Q5H943 113 aa12.98□□□□□ -0.33
PACSIN3-208ENST00000531226 WDR73Q6P4I2 378 aa12.98□□□□□ -0.33
PACSIN3-208ENST00000531226 C6orf223Q8N319 242 aa12.98□□□□□ -0.33
PACSIN3-208ENST00000531226 CNFNQ9BYD5 112 aa12.98□□□□□ -0.33
PACSIN3-208ENST00000531226 MSRB1Q9NZV6 116 aa12.98□□□□□ -0.33
PACSIN3-208ENST00000531226 FRAS1Q86XX4 4008 aa12.97□□□□□ -0.33
PACSIN3-208ENST00000531226 TMEM241Q24JQ0 296 aa12.97□□□□□ -0.33
PACSIN3-208ENST00000531226 GTSF1Q8WW33 167 aa12.97□□□□□ -0.33
PACSIN3-208ENST00000531226 OSTCQ9NRP0 149 aa12.97□□□□□ -0.33
PACSIN3-208ENST00000531226 A8MWL6 223 aa12.96□□□□□ -0.33
PACSIN3-208ENST00000531226 TRGC1P0CF51 173 aa12.96□□□□□ -0.33
PACSIN3-208ENST00000531226 NTF3P20783 257 aa12.96□□□□□ -0.33
PACSIN3-208ENST00000531226 LINC00315P59091 139 aa12.96□□□□□ -0.33
PACSIN3-208ENST00000531226 LELP1Q5T871 98 aa12.96□□□□□ -0.33
PACSIN3-208ENST00000531226 NAT8Q9UHE5 227 aa12.96□□□□□ -0.33
PACSIN3-208ENST00000531226 PRSS29PA6NIE9 313 aa12.95□□□□□ -0.34
PACSIN3-208ENST00000531226 F5H697 171 aa12.95□□□□□ -0.34
PACSIN3-208ENST00000531226 DNAH10OSP0CZ25 163 aa12.95□□□□□ -0.34
PACSIN3-208ENST00000531226 RPL23P62829 140 aaKnown RBP12.95□□□□□ -0.34
PACSIN3-208ENST00000531226 RPL36AP83881 106 aaKnown RBP12.95□□□□□ -0.34
PACSIN3-208ENST00000531226 OR10G8Q8NGN5 311 aa12.95□□□□□ -0.34
PACSIN3-208ENST00000531226 RPL36ALQ969Q0 106 aaKnown RBP12.95□□□□□ -0.34
PACSIN3-208ENST00000531226 ISOC2Q96AB3 205 aa12.95□□□□□ -0.34
PACSIN3-208ENST00000531226 TRBV7-3A0A075B6L6 115 aa12.94□□□□□ -0.34
PACSIN3-208ENST00000531226 TRAV8-6A0A0B4J262 113 aa12.94□□□□□ -0.34
PACSIN3-208ENST00000531226 BTF3P20290 206 aaKnown RBP12.94□□□□□ -0.34
PACSIN3-208ENST00000531226 OR10J3Q5JRS4 329 aa12.94□□□□□ -0.34
PACSIN3-208ENST00000531226 CLLU1Q5K131 121 aa12.94□□□□□ -0.34
PACSIN3-208ENST00000531226 IGHV3-38A0A0C4DH36 116 aa12.93□□□□□ -0.34
PACSIN3-208ENST00000531226 K7EP13 123 aa12.93□□□□□ -0.34
PACSIN3-208ENST00000531226 MGPP08493 103 aa12.93□□□□□ -0.34
PACSIN3-208ENST00000531226 EVI2AP22794 236 aa12.93□□□□□ -0.34
PACSIN3-208ENST00000531226 UBE2D3P61077 147 aa12.93□□□□□ -0.34
PACSIN3-208ENST00000531226 UBE2D2P62837 147 aa12.93□□□□□ -0.34
PACSIN3-208ENST00000531226 IFITM2Q01629 132 aa12.93□□□□□ -0.34
PACSIN3-208ENST00000531226 ADIRFQ15847 76 aa12.93□□□□□ -0.34
PACSIN3-208ENST00000531226 C15orf54Q8N8G6 183 aa12.93□□□□□ -0.34
PACSIN3-208ENST00000531226 NEXN-AS1Q8NBZ9 246 aa12.93□□□□□ -0.34
PACSIN3-208ENST00000531226 DPH3P1Q9H4G8 78 aa12.93□□□□□ -0.34
PACSIN3-208ENST00000531226 TRAV9-2A0A087WT02 112 aa12.92□□□□□ -0.34
PACSIN3-208ENST00000531226 FOXA3P55318 350 aaPredicted RBP12.92□□□□□ -0.34
PACSIN3-208ENST00000531226 TWIST1Q15672 202 aa12.92□□□□□ -0.34
PACSIN3-208ENST00000531226 TSKUQ8WUA8 353 aa12.92□□□□□ -0.34
PACSIN3-208ENST00000531226 GFRA4Q9GZZ7 299 aa12.92□□□□□ -0.34
PACSIN3-208ENST00000531226 V9GYV3 84 aa12.92□□□□□ -0.34
PACSIN3-208ENST00000531226 DNAH2Q9P225 4427 aa12.91□□□□□ -0.34
PACSIN3-208ENST00000531226 A0A087WWC5 75 aa12.91□□□□□ -0.34
PACSIN3-208ENST00000531226 LINC01556Q5JQF7 62 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 123.2 ms