RNA–Protein interactions for RNA: ENST00000530174.1

PCNX3-203, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 1,229 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-203ENST00000530174 C11orf52Q96A22 123 aa12.72□□□□□ -0.37
PCNX3-203ENST00000530174 SFRP2Q96HF1 295 aa12.72□□□□□ -0.37
PCNX3-203ENST00000530174 Q9UF83 564 aa12.72□□□□□ -0.37
PCNX3-203ENST00000530174 A0A087WWL8 130 aa12.71□□□□□ -0.37
PCNX3-203ENST00000530174 TEX46H3BTG2 121 aa12.71□□□□□ -0.37
PCNX3-203ENST00000530174 LINC01556Q5JQF7 62 aa12.71□□□□□ -0.37
PCNX3-203ENST00000530174 PRR27Q6MZM9 219 aa12.71□□□□□ -0.37
PCNX3-203ENST00000530174 SLC51BQ86UW2 128 aa12.71□□□□□ -0.37
PCNX3-203ENST00000530174 DERL1Q9BUN8 251 aa12.71□□□□□ -0.37
PCNX3-203ENST00000530174 hCG_2014768A0A024R1R8 64 aa12.7□□□□□ -0.38
PCNX3-203ENST00000530174 ERVFC1-1P60608 527 aa12.7□□□□□ -0.38
PCNX3-203ENST00000530174 CXCL1P09341 107 aa12.69□□□□□ -0.38
PCNX3-203ENST00000530174 AKAP14Q86UN6 197 aa12.69□□□□□ -0.38
PCNX3-203ENST00000530174 OR10AG1Q8NH19 301 aa12.68□□□□□ -0.38
PCNX3-203ENST00000530174 BOLA1Q9Y3E2 137 aa12.68□□□□□ -0.38
PCNX3-203ENST00000530174 EREGO14944 169 aa12.67□□□□□ -0.38
PCNX3-203ENST00000530174 CDK2AP2O75956 126 aa12.67□□□□□ -0.38
PCNX3-203ENST00000530174 IGHV3-30P01768 117 aa12.67□□□□□ -0.38
PCNX3-203ENST00000530174 IGHV3-33P01772 117 aa12.67□□□□□ -0.38
PCNX3-203ENST00000530174 IGHV3-30-3P0DP02 117 aa12.67□□□□□ -0.38
PCNX3-203ENST00000530174 IGHV3-30-5P0DP03 117 aa12.67□□□□□ -0.38
PCNX3-203ENST00000530174 CENPWQ5EE01 88 aa12.67□□□□□ -0.38
PCNX3-203ENST00000530174 C9orf62Q8N4C0 152 aa12.67□□□□□ -0.38
PCNX3-203ENST00000530174 KRTAP17-1Q9BYP8 105 aa12.67□□□□□ -0.38
PCNX3-203ENST00000530174 A0A087WTM6 91 aa12.66□□□□□ -0.38
PCNX3-203ENST00000530174 IBA57-AS1B1ANH7 110 aa12.66□□□□□ -0.38
PCNX3-203ENST00000530174 SNAI2O43623 268 aa12.66□□□□□ -0.38
PCNX3-203ENST00000530174 MEF2BQ02080 365 aaPredicted RBP12.66□□□□□ -0.38
PCNX3-203ENST00000530174 DNAH5Q8TE73 4624 aa12.65□□□□□ -0.38
PCNX3-203ENST00000530174 IFNA1P01562 189 aa12.65□□□□□ -0.38
PCNX3-203ENST00000530174 IGLV2-8P01709 118 aa12.65□□□□□ -0.38
PCNX3-203ENST00000530174 BCL2P10415 239 aa12.65□□□□□ -0.38
PCNX3-203ENST00000530174 FUSP35637 526 aaKnown RBP eCLIP12.65□□□□□ -0.38
PCNX3-203ENST00000530174 SSBP4Q9BWG4 385 aaPredicted RBP12.65□□□□□ -0.38
PCNX3-203ENST00000530174 MUC21A0A0G2JKD1 596 aa12.64□□□□□ -0.39
PCNX3-203ENST00000530174 MUC21A0A140T8X8 626 aa12.64□□□□□ -0.39
PCNX3-203ENST00000530174 RAB19A4D1S5 217 aa12.64□□□□□ -0.39
PCNX3-203ENST00000530174 PDE6DO43924 150 aa12.64□□□□□ -0.39
PCNX3-203ENST00000530174 OR5AL1P0C617 328 aa12.64□□□□□ -0.39
PCNX3-203ENST00000530174 Q8N3U1 123 aa12.64□□□□□ -0.39
PCNX3-203ENST00000530174 PGPEP1Q9NXJ5 209 aa12.64□□□□□ -0.39
PCNX3-203ENST00000530174 PCLOQ9Y6V0 5065 aa12.64□□□□□ -0.39
PCNX3-203ENST00000530174 HSPG2P98160 4391 aa12.64□□□□□ -0.39
PCNX3-203ENST00000530174 A0A087WWC5 75 aa12.63□□□□□ -0.39
PCNX3-203ENST00000530174 SPANXN1Q5VSR9 72 aa12.63□□□□□ -0.39
PCNX3-203ENST00000530174 Q9HAA7 133 aa12.63□□□□□ -0.39
PCNX3-203ENST00000530174 TRBV10-1A0A0K0K1A3 114 aa12.62□□□□□ -0.39
PCNX3-203ENST00000530174 GNG4P50150 75 aa12.62□□□□□ -0.39
PCNX3-203ENST00000530174 MED9Q9NWA0 146 aa12.62□□□□□ -0.39
PCNX3-203ENST00000530174 VAX2Q9UIW0 290 aa12.62□□□□□ -0.39
PCNX3-203ENST00000530174 TRBV20OR9-2A0A075B6H5 130 aa12.61□□□□□ -0.39
PCNX3-203ENST00000530174 PSCAO43653 123 aa12.61□□□□□ -0.39
PCNX3-203ENST00000530174 RAB4BP61018 213 aa12.61□□□□□ -0.39
PCNX3-203ENST00000530174 SSTP61278 116 aa12.61□□□□□ -0.39
PCNX3-203ENST00000530174 RPL36AP83881 106 aaKnown RBP12.61□□□□□ -0.39
PCNX3-203ENST00000530174 ZNF56Q15929 161 aa12.61□□□□□ -0.39
PCNX3-203ENST00000530174 CDPF1Q6NVV7 123 aa12.61□□□□□ -0.39
PCNX3-203ENST00000530174 RPL36ALQ969Q0 106 aaKnown RBP12.61□□□□□ -0.39
PCNX3-203ENST00000530174 DAZAP1Q96EP5 407 aaKnown RBP12.61□□□□□ -0.39
PCNX3-203ENST00000530174 SMIM12Q96EX1 92 aa12.61□□□□□ -0.39
PCNX3-203ENST00000530174 APOBP04114 4563 aaKnown RBP12.61□□□□□ -0.39
PCNX3-203ENST00000530174 C19orf71A6NCJ1 209 aa12.6□□□□□ -0.39
PCNX3-203ENST00000530174 GZMBP10144 247 aa12.6□□□□□ -0.39
PCNX3-203ENST00000530174 LAGE3Q14657 143 aa12.6□□□□□ -0.39
PCNX3-203ENST00000530174 OR2D3Q8NGH3 330 aa12.6□□□□□ -0.39
PCNX3-203ENST00000530174 TRBV7-3A0A075B6L6 115 aa12.59□□□□□ -0.39
PCNX3-203ENST00000530174 TAGLN2P37802 199 aaKnown RBP12.59□□□□□ -0.39
PCNX3-203ENST00000530174 UBE2D3P61077 147 aa12.59□□□□□ -0.39
PCNX3-203ENST00000530174 UBE2D2P62837 147 aa12.59□□□□□ -0.39
PCNX3-203ENST00000530174 ALKAL2Q6UX46 152 aa12.59□□□□□ -0.39
PCNX3-203ENST00000530174 LRCOL1A6NCL2 159 aa12.58□□□□□ -0.4
PCNX3-203ENST00000530174 RBFOX3A6NFN3 312 aa12.58□□□□□ -0.4
PCNX3-203ENST00000530174 IGLC6P0CF74 106 aa12.58□□□□□ -0.4
PCNX3-203ENST00000530174 RPS20P60866 119 aaKnown RBP12.58□□□□□ -0.4
PCNX3-203ENST00000530174 DAZ4Q86SG3 579 aaKnown RBP12.58□□□□□ -0.4
PCNX3-203ENST00000530174 MAPKAPK5-AS1Q8N8E1 139 aa12.58□□□□□ -0.4
PCNX3-203ENST00000530174 FER1L6-AS1Q8NA97 138 aa12.58□□□□□ -0.4
PCNX3-203ENST00000530174 OR10G8Q8NGN5 311 aa12.58□□□□□ -0.4
PCNX3-203ENST00000530174 TPPP3Q9BW30 176 aa12.58□□□□□ -0.4
PCNX3-203ENST00000530174 KRTAP4-5Q9BYR2 181 aa12.58□□□□□ -0.4
PCNX3-203ENST00000530174 DAZ3Q9NR90 486 aaKnown RBP12.58□□□□□ -0.4
PCNX3-203ENST00000530174 NEXN-AS1Q8NBZ9 246 aa12.57□□□□□ -0.4
PCNX3-203ENST00000530174 AP1S3Q96PC3 154 aa12.57□□□□□ -0.4
PCNX3-203ENST00000530174 F5H697 171 aa12.56□□□□□ -0.4
PCNX3-203ENST00000530174 P01737 135 aa12.56□□□□□ -0.4
PCNX3-203ENST00000530174 NIT1Q86X76 327 aa12.56□□□□□ -0.4
PCNX3-203ENST00000530174 BIN3Q9NQY0 253 aa12.56□□□□□ -0.4
PCNX3-203ENST00000530174 KIF25-AS1Q9Y6Z4 181 aa12.56□□□□□ -0.4
PCNX3-203ENST00000530174 ABCA13Q86UQ4 5058 aa12.55□□□□□ -0.4
PCNX3-203ENST00000530174 SMIM17P0DL12 118 aa12.55□□□□□ -0.4
PCNX3-203ENST00000530174 BLOC1S1P78537 153 aa12.55□□□□□ -0.4
PCNX3-203ENST00000530174 URGCP-MRPS24S4R325 110 aa12.55□□□□□ -0.4
PCNX3-203ENST00000530174 TRAV8-3A0A0A6YYJ7 113 aa12.54□□□□□ -0.4
PCNX3-203ENST00000530174 XKRY2A2RUG3 117 aa12.54□□□□□ -0.4
PCNX3-203ENST00000530174 NKX2-5P52952 324 aaPredicted RBP12.54□□□□□ -0.4
PCNX3-203ENST00000530174 TOR2AQ5JU69 321 aa12.54□□□□□ -0.4
PCNX3-203ENST00000530174 TM2D2Q9BX73 214 aa12.54□□□□□ -0.4
PCNX3-203ENST00000530174 A0A1B0GVG6 124 aa12.53□□□□□ -0.4
PCNX3-203ENST00000530174 KRTAP10-1P60331 282 aa12.53□□□□□ -0.4
PCNX3-203ENST00000530174 CACNG7P62955 275 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms