RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 Q8N8P6 123 aa1.71□□□□□ -2.14
C11orf88-204ENST00000529661 C22orf24Q9Y442 160 aa1.71□□□□□ -2.14
C11orf88-204ENST00000529661 DLEC1Q9Y238 1755 aa1.71□□□□□ -2.14
C11orf88-204ENST00000529661 ABCC10Q5T3U5 1492 aa1.7□□□□□ -2.14
C11orf88-204ENST00000529661 PRRC2BQ5JSZ5 2229 aaKnown RBP1.7□□□□□ -2.14
C11orf88-204ENST00000529661 TRGV2A0A075B6R0 118 aa1.7□□□□□ -2.14
C11orf88-204ENST00000529661 LOC110117498A0A087WWA1 95 aa1.7□□□□□ -2.14
C11orf88-204ENST00000529661 IGLV3-32A0A0A0MS00 114 aa1.7□□□□□ -2.14
C11orf88-204ENST00000529661 PIGBOS1A0A0B4J2F0 54 aa1.7□□□□□ -2.14
C11orf88-204ENST00000529661 TRBV10-1A0A0K0K1A3 114 aa1.7□□□□□ -2.14
C11orf88-204ENST00000529661 NUPR2A6NF83 97 aa1.7□□□□□ -2.14
C11orf88-204ENST00000529661 OOSP1A8MZH6 123 aa1.7□□□□□ -2.14
C11orf88-204ENST00000529661 JMJD7-PLA2G4BH0Y9G9 81 aa1.7□□□□□ -2.14
C11orf88-204ENST00000529661 SLC25A6P12236 298 aa1.7□□□□□ -2.14
C11orf88-204ENST00000529661 SLC48A1Q6P1K1 146 aa1.7□□□□□ -2.14
C11orf88-204ENST00000529661 CSAG1Q6PB30 78 aa1.7□□□□□ -2.14
C11orf88-204ENST00000529661 TTC9CQ8N5M4 171 aa1.7□□□□□ -2.14
C11orf88-204ENST00000529661 TSKUQ8WUA8 353 aa1.7□□□□□ -2.14
C11orf88-204ENST00000529661 DMAC1Q96GE9 116 aa1.7□□□□□ -2.14
C11orf88-204ENST00000529661 ZNF625Q96I27 306 aaPredicted RBP1.7□□□□□ -2.14
C11orf88-204ENST00000529661 AQP10Q96PS8 301 aa1.7□□□□□ -2.14
C11orf88-204ENST00000529661 SPAG17Q6Q759 2223 aa1.7□□□□□ -2.14
C11orf88-204ENST00000529661 ESPL1Q14674 2120 aa1.69□□□□□ -2.14
C11orf88-204ENST00000529661 PPYP01298 95 aa1.69□□□□□ -2.14
C11orf88-204ENST00000529661 SPINK8P0C7L1 97 aa1.69□□□□□ -2.14
C11orf88-204ENST00000529661 IL7P13232 177 aa1.69□□□□□ -2.14
C11orf88-204ENST00000529661 PDE6GP18545 87 aa1.69□□□□□ -2.14
C11orf88-204ENST00000529661 CBLN1P23435 193 aa1.69□□□□□ -2.14
C11orf88-204ENST00000529661 C9orf116Q5BN46 136 aaPredicted RBP1.69□□□□□ -2.14
C11orf88-204ENST00000529661 DLG5Q8TDM6 1919 aa1.69□□□□□ -2.14
C11orf88-204ENST00000529661 SHROOM2Q13796 1616 aa1.69□□□□□ -2.14
C11orf88-204ENST00000529661 IFT140Q96RY7 1462 aa1.69□□□□□ -2.14
C11orf88-204ENST00000529661 TNS1Q9HBL0 1735 aaKnown RBP1.69□□□□□ -2.14
C11orf88-204ENST00000529661 AFDNP55196 1824 aaKnown RBP1.68□□□□□ -2.14
C11orf88-204ENST00000529661 COL4A1P02462 1669 aa1.68□□□□□ -2.14
C11orf88-204ENST00000529661 IGKV3-7A0A075B6H7 116 aa1.68□□□□□ -2.14
C11orf88-204ENST00000529661 TMEM262E9PQX1 116 aa1.68□□□□□ -2.14
C11orf88-204ENST00000529661 IGKCP01834 107 aa1.68□□□□□ -2.14
C11orf88-204ENST00000529661 GNG2P59768 71 aa1.68□□□□□ -2.14
C11orf88-204ENST00000529661 NCMAPQ5T1S8 102 aa1.68□□□□□ -2.14
C11orf88-204ENST00000529661 C15orf53Q8NAA6 179 aa1.68□□□□□ -2.14
C11orf88-204ENST00000529661 C10orf105Q8TEF2 133 aa1.68□□□□□ -2.14
C11orf88-204ENST00000529661 ODF3Q96PU9 254 aa1.68□□□□□ -2.14
C11orf88-204ENST00000529661 ATG5Q9H1Y0 275 aa1.68□□□□□ -2.14
C11orf88-204ENST00000529661 MRPL36Q9P0J6 103 aaKnown RBP1.68□□□□□ -2.14
C11orf88-204ENST00000529661 TMEM14CQ9P0S9 112 aa1.68□□□□□ -2.14
C11orf88-204ENST00000529661 CC2D2AQ9P2K1 1620 aa1.68□□□□□ -2.14
C11orf88-204ENST00000529661 KIAA1551Q9HCM1 1747 aa1.68□□□□□ -2.14
C11orf88-204ENST00000529661 MED12Q93074 2177 aa1.68□□□□□ -2.14
C11orf88-204ENST00000529661 TROQ12816 1431 aaPredicted RBP1.67□□□□□ -2.14
C11orf88-204ENST00000529661 TANC1Q9C0D5 1861 aa1.67□□□□□ -2.14
C11orf88-204ENST00000529661 PHRF1Q9P1Y6 1649 aaKnown RBP1.67□□□□□ -2.14
C11orf88-204ENST00000529661 FAM24AA6NFZ4 105 aa1.67□□□□□ -2.14
C11orf88-204ENST00000529661 A6NIN4 97 aa1.67□□□□□ -2.14
C11orf88-204ENST00000529661 HCRTO43612 131 aa1.67□□□□□ -2.14
C11orf88-204ENST00000529661 IGLV3-1P01715 115 aa1.67□□□□□ -2.14
C11orf88-204ENST00000529661 UBE2G1P62253 170 aa1.67□□□□□ -2.14
C11orf88-204ENST00000529661 INSL4Q14641 139 aa1.67□□□□□ -2.14
C11orf88-204ENST00000529661 LINC00322Q6ZN03 302 aaPredicted RBP1.67□□□□□ -2.14
C11orf88-204ENST00000529661 C5orf38Q86SI9 138 aa1.67□□□□□ -2.14
C11orf88-204ENST00000529661 DSCR8Q96T75 97 aa1.67□□□□□ -2.14
C11orf88-204ENST00000529661 LIMD2Q9BT23 127 aa1.67□□□□□ -2.14
C11orf88-204ENST00000529661 CYSTM1Q9H1C7 97 aa1.67□□□□□ -2.14
C11orf88-204ENST00000529661 SNURFQ9Y675 71 aa1.67□□□□□ -2.14
C11orf88-204ENST00000529661 SPTBP11277 2137 aa1.67□□□□□ -2.14
C11orf88-204ENST00000529661 CPSF1Q10570 1443 aaKnown RBP1.66□□□□□ -2.14
C11orf88-204ENST00000529661 NRXN2Q9P2S2 1712 aa1.66□□□□□ -2.14
C11orf88-204ENST00000529661 SORL1Q92673 2214 aa1.66□□□□□ -2.14
C11orf88-204ENST00000529661 TCRBV3S1A0A5B6 114 aa1.66□□□□□ -2.14
C11orf88-204ENST00000529661 ATP5EP56381 51 aaPredicted RBP1.66□□□□□ -2.14
C11orf88-204ENST00000529661 S100A10P60903 97 aa1.66□□□□□ -2.14
C11orf88-204ENST00000529661 RPL7L1Q6DKI1 246 aaKnown RBP1.66□□□□□ -2.14
C11orf88-204ENST00000529661 SBSPONQ8IVN8 264 aa1.66□□□□□ -2.14
C11orf88-204ENST00000529661 ZNF563Q8TA94 476 aa1.66□□□□□ -2.14
C11orf88-204ENST00000529661 MRPL35Q9NZE8 188 aaKnown RBP1.66□□□□□ -2.14
C11orf88-204ENST00000529661 CDK12Q9NYV4 1490 aaPredicted RBP1.66□□□□□ -2.14
C11orf88-204ENST00000529661 TOPAZ1Q8N9V7 1692 aa1.66□□□□□ -2.14
C11orf88-204ENST00000529661 TET1Q8NFU7 2136 aa1.66□□□□□ -2.14
C11orf88-204ENST00000529661 CHD1O14646 1710 aa1.66□□□□□ -2.14
C11orf88-204ENST00000529661 ARAP2Q8WZ64 1704 aa1.66□□□□□ -2.14
C11orf88-204ENST00000529661 RREB1Q92766 1687 aa1.65□□□□□ -2.15
C11orf88-204ENST00000529661 RAPGEF2Q9Y4G8 1499 aa1.65□□□□□ -2.15
C11orf88-204ENST00000529661 TRBV10-3A0A0K0K1G6 114 aa1.65□□□□□ -2.15
C11orf88-204ENST00000529661 PVALEFA0A1B0GWK0 134 aa1.65□□□□□ -2.15
C11orf88-204ENST00000529661 H3BQ15 152 aa1.65□□□□□ -2.15
C11orf88-204ENST00000529661 SPRNQ5BIV9 151 aa1.65□□□□□ -2.15
C11orf88-204ENST00000529661 COL5A1-AS1Q5SY13 56 aa1.65□□□□□ -2.15
C11orf88-204ENST00000529661 UNQ6190/PRO20217Q6UXQ8 127 aa1.65□□□□□ -2.15
C11orf88-204ENST00000529661 DEFB132Q7Z7B7 95 aa1.65□□□□□ -2.15
C11orf88-204ENST00000529661 KRTAP4-1Q9BYQ7 146 aa1.65□□□□□ -2.15
C11orf88-204ENST00000529661 ARFGEF1Q9Y6D6 1849 aa1.65□□□□□ -2.15
C11orf88-204ENST00000529661 ARHGAP5Q13017 1502 aa1.65□□□□□ -2.15
C11orf88-204ENST00000529661 TET3O43151 1660 aa1.64□□□□□ -2.15
C11orf88-204ENST00000529661 FCGBPQ9Y6R7 5405 aaPredicted RBP1.64□□□□□ -2.15
C11orf88-204ENST00000529661 TEX14Q8IWB6 1497 aa1.64□□□□□ -2.15
C11orf88-204ENST00000529661 UBE2L5PA0A1B0GUS4 154 aa1.64□□□□□ -2.15
C11orf88-204ENST00000529661 HIGD1CA8MV81 97 aa1.64□□□□□ -2.15
C11orf88-204ENST00000529661 SSSCA1O60232 199 aa1.64□□□□□ -2.15
C11orf88-204ENST00000529661 MPC2O95563 127 aa1.64□□□□□ -2.15
C11orf88-204ENST00000529661 DNAL4O96015 105 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms