RNA–Protein interactions for RNA: ENST00000529167.5

C11orf88-203, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene C11orf88, Length 3,099 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-203ENST00000529167 TRACP01848 142 aa6.13□□□□□ -1.43
C11orf88-203ENST00000529167 SSR4P51571 173 aa6.13□□□□□ -1.43
C11orf88-203ENST00000529167 PVRIGQ6DKI7 326 aa6.13□□□□□ -1.43
C11orf88-203ENST00000529167 PKDREJQ9NTG1 2253 aa6.13□□□□□ -1.43
C11orf88-203ENST00000529167 A0A0G2JNJ9 132 aa6.12□□□□□ -1.43
C11orf88-203ENST00000529167 EIF4EBP3O60516 100 aaPredicted RBP6.12□□□□□ -1.43
C11orf88-203ENST00000529167 METTL26Q96S19 204 aa6.12□□□□□ -1.43
C11orf88-203ENST00000529167 MRPL36Q9P0J6 103 aaKnown RBP6.12□□□□□ -1.43
C11orf88-203ENST00000529167 CTSZQ9UBR2 303 aa6.12□□□□□ -1.43
C11orf88-203ENST00000529167 Q9UFV3 132 aa6.12□□□□□ -1.43
C11orf88-203ENST00000529167 DCHS2Q6V1P9 2916 aa6.12□□□□□ -1.43
C11orf88-203ENST00000529167 IGKV3D-15A0A087WSY6 115 aa6.12□□□□□ -1.43
C11orf88-203ENST00000529167 C17orf100A8MU93 164 aa6.12□□□□□ -1.43
C11orf88-203ENST00000529167 C19orf84I3L1E1 186 aa6.12□□□□□ -1.43
C11orf88-203ENST00000529167 LINC00643Q86TS7 51 aa6.12□□□□□ -1.43
C11orf88-203ENST00000529167 H7C423 109 aa6.12□□□□□ -1.43
C11orf88-203ENST00000529167 ELANEP08246 267 aa6.12□□□□□ -1.43
C11orf88-203ENST00000529167 SAA2P0DJI9 122 aaPredicted RBP6.12□□□□□ -1.43
C11orf88-203ENST00000529167 PRIMA1Q86XR5 153 aa6.12□□□□□ -1.43
C11orf88-203ENST00000529167 DCTN5Q9BTE1 182 aa6.12□□□□□ -1.43
C11orf88-203ENST00000529167 A0A0U1RQV1 116 aa6.11□□□□□ -1.43
C11orf88-203ENST00000529167 LY6LH3BQJ8 138 aa6.11□□□□□ -1.43
C11orf88-203ENST00000529167 J3QQQ9 107 aa6.11□□□□□ -1.43
C11orf88-203ENST00000529167 WNT9BO14905 357 aa6.11□□□□□ -1.43
C11orf88-203ENST00000529167 PRRC2AP48634 2157 aaKnown RBP6.11□□□□□ -1.43
C11orf88-203ENST00000529167 TRBV19A0A075B6N1 114 aa6.11□□□□□ -1.43
C11orf88-203ENST00000529167 H3BTX0 84 aa6.11□□□□□ -1.43
C11orf88-203ENST00000529167 SH2D1AO60880 128 aa6.11□□□□□ -1.43
C11orf88-203ENST00000529167 CGB3P0DN86 165 aa6.11□□□□□ -1.43
C11orf88-203ENST00000529167 CGB7P0DN87 165 aa6.11□□□□□ -1.43
C11orf88-203ENST00000529167 ZNF22P17026 224 aaPredicted RBP6.11□□□□□ -1.43
C11orf88-203ENST00000529167 C2orf82Q6UX34 121 aa6.11□□□□□ -1.43
C11orf88-203ENST00000529167 FANCD2OSQ96PS1 177 aa6.11□□□□□ -1.43
C11orf88-203ENST00000529167 VKORC1Q9BQB6 163 aa6.11□□□□□ -1.43
C11orf88-203ENST00000529167 TACC2O95359 2948 aa6.11□□□□□ -1.43
C11orf88-203ENST00000529167 TMEM178BH3BS89 294 aa6.1□□□□□ -1.43
C11orf88-203ENST00000529167 CXCL13O43927 109 aa6.1□□□□□ -1.43
C11orf88-203ENST00000529167 NRACQ8N912 160 aa6.1□□□□□ -1.43
C11orf88-203ENST00000529167 KLF14Q8TD94 323 aaPredicted RBP6.1□□□□□ -1.43
C11orf88-203ENST00000529167 TOMM6Q96B49 74 aa6.1□□□□□ -1.43
C11orf88-203ENST00000529167 C8orf49Q96NF6 230 aa6.1□□□□□ -1.43
C11orf88-203ENST00000529167 ZGRF1Q86YA3 2104 aa6.1□□□□□ -1.43
C11orf88-203ENST00000529167 PRRC2CQ9Y520 2896 aaKnown RBP6.1□□□□□ -1.43
C11orf88-203ENST00000529167 CGB1A6NKQ9 187 aa6.1□□□□□ -1.43
C11orf88-203ENST00000529167 WT1-ASQ06250 92 aa6.1□□□□□ -1.43
C11orf88-203ENST00000529167 LINC00482Q8N8I6 264 aa6.1□□□□□ -1.43
C11orf88-203ENST00000529167 Q96MF0 132 aa6.1□□□□□ -1.43
C11orf88-203ENST00000529167 ZNF469Q96JG9 3925 aaPredicted RBP6.1□□□□□ -1.43
C11orf88-203ENST00000529167 IQCF6A8MYZ5 107 aa6.1□□□□□ -1.43
C11orf88-203ENST00000529167 E7EUB6 86 aa6.1□□□□□ -1.43
C11orf88-203ENST00000529167 ATOX1O00244 68 aa6.1□□□□□ -1.43
C11orf88-203ENST00000529167 MRPL33O75394 65 aaKnown RBP6.1□□□□□ -1.43
C11orf88-203ENST00000529167 SAA1P0DJI8 122 aaPredicted RBP6.1□□□□□ -1.43
C11orf88-203ENST00000529167 CCL3P10147 92 aa6.1□□□□□ -1.43
C11orf88-203ENST00000529167 PFN2P35080 140 aa6.1□□□□□ -1.43
C11orf88-203ENST00000529167 Q0VFX4 171 aa6.1□□□□□ -1.43
C11orf88-203ENST00000529167 Q6ZS46 218 aa6.1□□□□□ -1.43
C11orf88-203ENST00000529167 KLHL30-AS1Q8NEE0 82 aa6.1□□□□□ -1.43
C11orf88-203ENST00000529167 C9orf85Q96MD7 179 aa6.1□□□□□ -1.43
C11orf88-203ENST00000529167 UPK3BQ9BT76 320 aa6.1□□□□□ -1.43
C11orf88-203ENST00000529167 DEFB126Q9BYW3 111 aa6.1□□□□□ -1.43
C11orf88-203ENST00000529167 AGPAT4-IT1Q9H0P7 198 aa6.1□□□□□ -1.43
C11orf88-203ENST00000529167 MSRB1Q9NZV6 116 aa6.1□□□□□ -1.43
C11orf88-203ENST00000529167 hADV29S1A0JD25 119 aa6.09□□□□□ -1.43
C11orf88-203ENST00000529167 CCL21O00585 134 aa6.09□□□□□ -1.43
C11orf88-203ENST00000529167 IGKV1-16P04430 117 aa6.09□□□□□ -1.43
C11orf88-203ENST00000529167 GRPP07492 148 aa6.09□□□□□ -1.43
C11orf88-203ENST00000529167 EGR2P11161 476 aaPredicted RBP6.09□□□□□ -1.43
C11orf88-203ENST00000529167 CD177Q8N6Q3 437 aa6.09□□□□□ -1.43
C11orf88-203ENST00000529167 ZNF256Q9Y2P7 627 aaPredicted RBP6.09□□□□□ -1.43
C11orf88-203ENST00000529167 SCRG1O75711 98 aa6.09□□□□□ -1.44
C11orf88-203ENST00000529167 IGHV3-9P01782 118 aa6.09□□□□□ -1.44
C11orf88-203ENST00000529167 GATA1P15976 413 aaPredicted RBP6.09□□□□□ -1.44
C11orf88-203ENST00000529167 PCOLCEQ15113 449 aa6.09□□□□□ -1.44
C11orf88-203ENST00000529167 AMELXQ99217 191 aa6.09□□□□□ -1.44
C11orf88-203ENST00000529167 EPM2AB3EWF7 344 aa6.08□□□□□ -1.44
C11orf88-203ENST00000529167 TFF1P04155 84 aa6.08□□□□□ -1.44
C11orf88-203ENST00000529167 COX6A1P12074 109 aa6.08□□□□□ -1.44
C11orf88-203ENST00000529167 RUSC1-AS1Q66K80 236 aa6.08□□□□□ -1.44
C11orf88-203ENST00000529167 LINC01561Q8N1V8 128 aa6.08□□□□□ -1.44
C11orf88-203ENST00000529167 SMCR5Q8TEV8 140 aa6.08□□□□□ -1.44
C11orf88-203ENST00000529167 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.08□□□□□ -1.44
C11orf88-203ENST00000529167 HERVK_113P61574 105 aa6.08□□□□□ -1.44
C11orf88-203ENST00000529167 ERCC8Q13216 396 aa6.08□□□□□ -1.44
C11orf88-203ENST00000529167 RPUSD1Q9UJJ7 312 aaKnown RBP6.08□□□□□ -1.44
C11orf88-203ENST00000529167 TNCP24821 2201 aa6.08□□□□□ -1.44
C11orf88-203ENST00000529167 PAPPA-AS1Q5QFB9 102 aa6.07□□□□□ -1.44
C11orf88-203ENST00000529167 SHANK2-AS3Q9BTD1 123 aa6.07□□□□□ -1.44
C11orf88-203ENST00000529167 TMEM223A0PJW6 202 aa6.07□□□□□ -1.44
C11orf88-203ENST00000529167 PLGLAQ15195 96 aa6.07□□□□□ -1.44
C11orf88-203ENST00000529167 C17orf58Q2M2W7 97 aa6.07□□□□□ -1.44
C11orf88-203ENST00000529167 ORMDL2Q53FV1 153 aa6.07□□□□□ -1.44
C11orf88-203ENST00000529167 ZNF826PQ6ZT77 177 aa6.07□□□□□ -1.44
C11orf88-203ENST00000529167 TP53TG1Q9Y2A0 90 aa6.07□□□□□ -1.44
C11orf88-203ENST00000529167 TRAV13-1A0A0B4J241 112 aa6.07□□□□□ -1.44
C11orf88-203ENST00000529167 TRIAP1O43715 76 aa6.07□□□□□ -1.44
C11orf88-203ENST00000529167 IGHV3-48P01763 117 aa6.07□□□□□ -1.44
C11orf88-203ENST00000529167 IGHV4-39P01824 125 aa6.07□□□□□ -1.44
C11orf88-203ENST00000529167 HOXA4Q00056 320 aaPredicted RBP6.07□□□□□ -1.44
C11orf88-203ENST00000529167 GFRALQ6UXV0 394 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms