RNA–Protein interactions for RNA: ENST00000525367.1

USP47-206, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-206ENST00000525367 PTPRFP10586 1907 aa2.08□□□□□ -2.08
USP47-206ENST00000525367 IFT140Q96RY7 1462 aa2.07□□□□□ -2.08
USP47-206ENST00000525367 PKIAP61925 76 aa2.07□□□□□ -2.08
USP47-206ENST00000525367 CYP2G1PQ6ZSU1 146 aa2.07□□□□□ -2.08
USP47-206ENST00000525367 C5orf38Q86SI9 138 aa2.07□□□□□ -2.08
USP47-206ENST00000525367 TTC9CQ8N5M4 171 aa2.07□□□□□ -2.08
USP47-206ENST00000525367 DSCR8Q96T75 97 aa2.07□□□□□ -2.08
USP47-206ENST00000525367 CASZ1Q86V15 1759 aa2.07□□□□□ -2.08
USP47-206ENST00000525367 ANK1P16157 1881 aa2.07□□□□□ -2.08
USP47-206ENST00000525367 TEX49A0A1B0GTD5 131 aa2.06□□□□□ -2.08
USP47-206ENST00000525367 SSSCA1O60232 199 aa2.06□□□□□ -2.08
USP47-206ENST00000525367 S100A10P60903 97 aa2.06□□□□□ -2.08
USP47-206ENST00000525367 BAHCC1Q9P281 2608 aa2.06□□□□□ -2.08
USP47-206ENST00000525367 MYH9P35579 1960 aaKnown RBP2.06□□□□□ -2.08
USP47-206ENST00000525367 PTPRMP28827 1452 aa2.06□□□□□ -2.08
USP47-206ENST00000525367 UNC13CQ8NB66 2214 aa2.06□□□□□ -2.08
USP47-206ENST00000525367 UBE2L5PA0A1B0GUS4 154 aa2.05□□□□□ -2.08
USP47-206ENST00000525367 ATP5EP56381 51 aaPredicted RBP2.05□□□□□ -2.08
USP47-206ENST00000525367 UBE2L3P68036 154 aaKnown RBP2.05□□□□□ -2.08
USP47-206ENST00000525367 CCL8P80075 99 aa2.05□□□□□ -2.08
USP47-206ENST00000525367 NCMAPQ5T1S8 102 aa2.05□□□□□ -2.08
USP47-206ENST00000525367 KRTAP5-7Q6L8G8 165 aa2.05□□□□□ -2.08
USP47-206ENST00000525367 DEFB119Q8N690 84 aa2.05□□□□□ -2.08
USP47-206ENST00000525367 PPP1R1CQ8WVI7 109 aa2.05□□□□□ -2.08
USP47-206ENST00000525367 C10orf82Q8WW14 230 aa2.05□□□□□ -2.08
USP47-206ENST00000525367 AMELYQ99218 206 aa2.05□□□□□ -2.08
USP47-206ENST00000525367 CUL7Q14999 1698 aa2.05□□□□□ -2.08
USP47-206ENST00000525367 SIP14410 1827 aa2.05□□□□□ -2.08
USP47-206ENST00000525367 ATG2AQ2TAZ0 1938 aa2.05□□□□□ -2.08
USP47-206ENST00000525367 AKAP11Q9UKA4 1901 aa2.05□□□□□ -2.08
USP47-206ENST00000525367 TRAV13-2A0A0B4J235 113 aa2.04□□□□□ -2.08
USP47-206ENST00000525367 LOC101927531A0A1B0GV80 90 aa2.04□□□□□ -2.08
USP47-206ENST00000525367 TMEM262E9PQX1 116 aa2.04□□□□□ -2.08
USP47-206ENST00000525367 DCDP81605 110 aaKnown RBP2.04□□□□□ -2.08
USP47-206ENST00000525367 XAF1Q6GPH4 301 aa2.04□□□□□ -2.08
USP47-206ENST00000525367 NRKQ7Z2Y5 1582 aa2.04□□□□□ -2.08
USP47-206ENST00000525367 ZFYVE16Q7Z3T8 1539 aa2.04□□□□□ -2.08
USP47-206ENST00000525367 QRICH2Q9H0J4 1663 aa2.04□□□□□ -2.08
USP47-206ENST00000525367 MYOFQ9NZM1 2061 aa2.04□□□□□ -2.08
USP47-206ENST00000525367 CR1P17927 2039 aa2.03□□□□□ -2.08
USP47-206ENST00000525367 TRPM7Q96QT4 1865 aa2.03□□□□□ -2.08
USP47-206ENST00000525367 CDK12Q9NYV4 1490 aaPredicted RBP2.03□□□□□ -2.08
USP47-206ENST00000525367 KRTAP12-3P60328 96 aa2.03□□□□□ -2.08
USP47-206ENST00000525367 ZNF818PQ6ZRF7 136 aa2.03□□□□□ -2.08
USP47-206ENST00000525367 COMMD6Q7Z4G1 85 aa2.03□□□□□ -2.08
USP47-206ENST00000525367 DEFB132Q7Z7B7 95 aa2.03□□□□□ -2.08
USP47-206ENST00000525367 SBSPONQ8IVN8 264 aa2.03□□□□□ -2.08
USP47-206ENST00000525367 DPH3P1Q9H4G8 78 aa2.03□□□□□ -2.08
USP47-206ENST00000525367 ARFGEF3Q5TH69 2177 aa2.03□□□□□ -2.08
USP47-206ENST00000525367 NINQ8N4C6 2090 aa2.03□□□□□ -2.08
USP47-206ENST00000525367 EML5Q05BV3 1969 aa2.03□□□□□ -2.08
USP47-206ENST00000525367 CPSF1Q10570 1443 aaKnown RBP2.02□□□□□ -2.09
USP47-206ENST00000525367 ALPK3Q96L96 1907 aa2.02□□□□□ -2.09
USP47-206ENST00000525367 IGKV2-29A2NJV5 120 aaPredicted RBP2.02□□□□□ -2.09
USP47-206ENST00000525367 HCG22E2RYF7 251 aa2.02□□□□□ -2.09
USP47-206ENST00000525367 J3QKU1 62 aa2.02□□□□□ -2.09
USP47-206ENST00000525367 COL5A1-AS1Q5SY13 56 aa2.02□□□□□ -2.09
USP47-206ENST00000525367 H3BQ15 152 aa2.01□□□□□ -2.09
USP47-206ENST00000525367 SIX6O95475 246 aa2.01□□□□□ -2.09
USP47-206ENST00000525367 FXYD3Q14802 87 aa2.01□□□□□ -2.09
USP47-206ENST00000525367 Q6ZQY7 126 aa2.01□□□□□ -2.09
USP47-206ENST00000525367 CYP4F30PQ9H0H9 118 aa2.01□□□□□ -2.09
USP47-206ENST00000525367 UBE2D1P51668 147 aa2□□□□□ -2.09
USP47-206ENST00000525367 SSBP1Q04837 148 aaKnown RBP2□□□□□ -2.09
USP47-206ENST00000525367 MYOZ3Q8TDC0 251 aa2□□□□□ -2.09
USP47-206ENST00000525367 BET1LQ9NYM9 111 aa2□□□□□ -2.09
USP47-206ENST00000525367 AP4S1Q9Y587 144 aa2□□□□□ -2.09
USP47-206ENST00000525367 INTS1Q8N201 2190 aaKnown RBP2□□□□□ -2.09
USP47-206ENST00000525367 BCORL1Q5H9F3 1711 aa2□□□□□ -2.09
USP47-206ENST00000525367 KDM6BO15054 1643 aa1.99□□□□□ -2.09
USP47-206ENST00000525367 CAV3P56539 151 aa1.99□□□□□ -2.09
USP47-206ENST00000525367 GNG2P59768 71 aa1.99□□□□□ -2.09
USP47-206ENST00000525367 FAM74A4Q5TZK3 123 aa1.99□□□□□ -2.09
USP47-206ENST00000525367 C20orf197Q8N268 126 aa1.99□□□□□ -2.09
USP47-206ENST00000525367 HIVEP2P31629 2446 aa1.99□□□□□ -2.09
USP47-206ENST00000525367 MYO18AQ92614 2054 aaKnown RBP1.98□□□□□ -2.09
USP47-206ENST00000525367 CHD3Q12873 2000 aaKnown RBP1.98□□□□□ -2.09
USP47-206ENST00000525367 RBBP6Q7Z6E9 1792 aaKnown RBP1.98□□□□□ -2.09
USP47-206ENST00000525367 PTPRDP23468 1912 aa1.98□□□□□ -2.09
USP47-206ENST00000525367 NBDYA0A0U1RRE5 68 aa1.98□□□□□ -2.09
USP47-206ENST00000525367 PCNX2A6NKB5 2137 aa1.98□□□□□ -2.09
USP47-206ENST00000525367 FXYD1O00168 92 aa1.98□□□□□ -2.09
USP47-206ENST00000525367 NCR3O14931 201 aa1.98□□□□□ -2.09
USP47-206ENST00000525367 LINC00032P0C843 101 aa1.98□□□□□ -2.09
USP47-206ENST00000525367 SNCAP37840 140 aa1.98□□□□□ -2.09
USP47-206ENST00000525367 ZNF56Q15929 161 aa1.98□□□□□ -2.09
USP47-206ENST00000525367 LINC00312Q9Y6C7 94 aa1.98□□□□□ -2.09
USP47-206ENST00000525367 ZNF609O15014 1411 aa1.98□□□□□ -2.09
USP47-206ENST00000525367 C10orf71Q711Q0 1435 aa1.98□□□□□ -2.09
USP47-206ENST00000525367 TNRC6BQ9UPQ9 1833 aaKnown RBP1.98□□□□□ -2.09
USP47-206ENST00000525367 EXPH5Q8NEV8 1989 aa1.98□□□□□ -2.09
USP47-206ENST00000525367 TRBV7-1A0A0A6YYK4 115 aa1.97□□□□□ -2.09
USP47-206ENST00000525367 RBAKDNA6NC62 111 aa1.97□□□□□ -2.09
USP47-206ENST00000525367 MPC2O95563 127 aa1.97□□□□□ -2.09
USP47-206ENST00000525367 C5orf56Q8N8D9 126 aa1.97□□□□□ -2.09
USP47-206ENST00000525367 DPY30Q9C005 99 aa1.97□□□□□ -2.09
USP47-206ENST00000525367 CTTNBP2Q8WZ74 1663 aa1.96□□□□□ -2.1
USP47-206ENST00000525367 TNRC6AQ8NDV7 1962 aaKnown RBP1.96□□□□□ -2.1
USP47-206ENST00000525367 ABCC10Q5T3U5 1492 aa1.96□□□□□ -2.1
USP47-206ENST00000525367 CCL3L1P16619 93 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms