RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 IGHV3-38A0A0C4DH36 116 aa8.69□□□□□ -1.02
TRAPPC4-205ENST00000525079 A0A1B0GVG6 124 aa8.69□□□□□ -1.02
TRAPPC4-205ENST00000525079 IFNA1P01562 189 aa8.69□□□□□ -1.02
TRAPPC4-205ENST00000525079 IGHV3-30P01768 117 aa8.69□□□□□ -1.02
TRAPPC4-205ENST00000525079 IGHV3-33P01772 117 aa8.69□□□□□ -1.02
TRAPPC4-205ENST00000525079 IGHV3-30-3P0DP02 117 aa8.69□□□□□ -1.02
TRAPPC4-205ENST00000525079 IGHV3-30-5P0DP03 117 aa8.69□□□□□ -1.02
TRAPPC4-205ENST00000525079 KRTAP10-2P60368 255 aa8.69□□□□□ -1.02
TRAPPC4-205ENST00000525079 CENPWQ5EE01 88 aa8.69□□□□□ -1.02
TRAPPC4-205ENST00000525079 OR10AG1Q8NH19 301 aa8.69□□□□□ -1.02
TRAPPC4-205ENST00000525079 GTSF1LQ9H1H1 148 aa8.69□□□□□ -1.02
TRAPPC4-205ENST00000525079 MSRB1Q9NZV6 116 aa8.69□□□□□ -1.02
TRAPPC4-205ENST00000525079 DYNC1H1Q14204 4646 aaKnown RBP8.69□□□□□ -1.02
TRAPPC4-205ENST00000525079 PKHD1P08F94 4074 aa8.69□□□□□ -1.02
TRAPPC4-205ENST00000525079 KIAA1109Q2LD37 5005 aa8.69□□□□□ -1.02
TRAPPC4-205ENST00000525079 DNAH11Q96DT5 4516 aa8.68□□□□□ -1.02
TRAPPC4-205ENST00000525079 RHODO00212 210 aa8.68□□□□□ -1.02
TRAPPC4-205ENST00000525079 IGLV2-8P01709 118 aa8.68□□□□□ -1.02
TRAPPC4-205ENST00000525079 FUSP35637 526 aaKnown RBP eCLIP8.68□□□□□ -1.02
TRAPPC4-205ENST00000525079 MEF2BQ02080 365 aaPredicted RBP8.68□□□□□ -1.02
TRAPPC4-205ENST00000525079 LELP1Q5T871 98 aa8.68□□□□□ -1.02
TRAPPC4-205ENST00000525079 ALKAL2Q6UX46 152 aa8.68□□□□□ -1.02
TRAPPC4-205ENST00000525079 MED9Q9NWA0 146 aa8.68□□□□□ -1.02
TRAPPC4-205ENST00000525079 LINC00694P0DN24 101 aa8.67□□□□□ -1.02
TRAPPC4-205ENST00000525079 GZMBP10144 247 aa8.67□□□□□ -1.02
TRAPPC4-205ENST00000525079 BCL2P10415 239 aa8.67□□□□□ -1.02
TRAPPC4-205ENST00000525079 NKX2-5P52952 324 aaPredicted RBP8.67□□□□□ -1.02
TRAPPC4-205ENST00000525079 NFE4Q86UQ8 179 aa8.67□□□□□ -1.02
TRAPPC4-205ENST00000525079 VAX2Q9UIW0 290 aa8.67□□□□□ -1.02
TRAPPC4-205ENST00000525079 HERC2O95714 4834 aa8.66□□□□□ -1.02
TRAPPC4-205ENST00000525079 PDE6DO43924 150 aa8.66□□□□□ -1.02
TRAPPC4-205ENST00000525079 CXCL1P09341 107 aa8.66□□□□□ -1.02
TRAPPC4-205ENST00000525079 GNG4P50150 75 aa8.66□□□□□ -1.02
TRAPPC4-205ENST00000525079 LINC01556Q5JQF7 62 aa8.66□□□□□ -1.02
TRAPPC4-205ENST00000525079 Q8N3U1 123 aa8.66□□□□□ -1.02
TRAPPC4-205ENST00000525079 DAZAP1Q96EP5 407 aaKnown RBP8.66□□□□□ -1.02
TRAPPC4-205ENST00000525079 K7EP13 123 aa8.65□□□□□ -1.02
TRAPPC4-205ENST00000525079 SNAI2O43623 268 aa8.65□□□□□ -1.02
TRAPPC4-205ENST00000525079 ERVFC1-1P60608 527 aa8.65□□□□□ -1.02
TRAPPC4-205ENST00000525079 SPANXN1Q5VSR9 72 aa8.65□□□□□ -1.02
TRAPPC4-205ENST00000525079 C10orf126Q8N4M7 172 aa8.65□□□□□ -1.02
TRAPPC4-205ENST00000525079 OR2D3Q8NGH3 330 aa8.65□□□□□ -1.02
TRAPPC4-205ENST00000525079 TPPP3Q9BW30 176 aa8.65□□□□□ -1.02
TRAPPC4-205ENST00000525079 SSBP4Q9BWG4 385 aaPredicted RBP8.65□□□□□ -1.02
TRAPPC4-205ENST00000525079 Q9HAA7 133 aa8.65□□□□□ -1.02
TRAPPC4-205ENST00000525079 TRBV20OR9-2A0A075B6H5 130 aa8.64□□□□□ -1.03
TRAPPC4-205ENST00000525079 C19orf71A6NCJ1 209 aa8.64□□□□□ -1.03
TRAPPC4-205ENST00000525079 RBFOX3A6NFN3 312 aa8.64□□□□□ -1.03
TRAPPC4-205ENST00000525079 IBA57-AS1B1ANH7 110 aa8.64□□□□□ -1.03
TRAPPC4-205ENST00000525079 OR5AL1P0C617 328 aa8.64□□□□□ -1.03
TRAPPC4-205ENST00000525079 ZNF56Q15929 161 aa8.64□□□□□ -1.03
TRAPPC4-205ENST00000525079 A0A087WTM6 91 aa8.63□□□□□ -1.03
TRAPPC4-205ENST00000525079 F5H697 171 aa8.63□□□□□ -1.03
TRAPPC4-205ENST00000525079 EREGO14944 169 aa8.63□□□□□ -1.03
TRAPPC4-205ENST00000525079 BLOC1S1P78537 153 aa8.63□□□□□ -1.03
TRAPPC4-205ENST00000525079 P01737 135 aa8.62□□□□□ -1.03
TRAPPC4-205ENST00000525079 TAGLN2P37802 199 aaKnown RBP8.62□□□□□ -1.03
TRAPPC4-205ENST00000525079 RPS20P60866 119 aaKnown RBP8.62□□□□□ -1.03
TRAPPC4-205ENST00000525079 RAB4BP61018 213 aa8.62□□□□□ -1.03
TRAPPC4-205ENST00000525079 RPL36AP83881 106 aaKnown RBP8.62□□□□□ -1.03
TRAPPC4-205ENST00000525079 FER1L6-AS1Q8NA97 138 aa8.62□□□□□ -1.03
TRAPPC4-205ENST00000525079 RPL36ALQ969Q0 106 aaKnown RBP8.62□□□□□ -1.03
TRAPPC4-205ENST00000525079 TRBV7-3A0A075B6L6 115 aa8.61□□□□□ -1.03
TRAPPC4-205ENST00000525079 A0A087WWC5 75 aa8.61□□□□□ -1.03
TRAPPC4-205ENST00000525079 TRBV10-1A0A0K0K1A3 114 aa8.61□□□□□ -1.03
TRAPPC4-205ENST00000525079 PSCAO43653 123 aa8.61□□□□□ -1.03
TRAPPC4-205ENST00000525079 IGLC6P0CF74 106 aa8.61□□□□□ -1.03
TRAPPC4-205ENST00000525079 UBE2D3P61077 147 aa8.61□□□□□ -1.03
TRAPPC4-205ENST00000525079 UBE2D2P62837 147 aa8.61□□□□□ -1.03
TRAPPC4-205ENST00000525079 DAZ4Q86SG3 579 aaKnown RBP8.61□□□□□ -1.03
TRAPPC4-205ENST00000525079 NEXN-AS1Q8NBZ9 246 aa8.61□□□□□ -1.03
TRAPPC4-205ENST00000525079 NUDT10Q8NFP7 164 aa8.61□□□□□ -1.03
TRAPPC4-205ENST00000525079 SMIM12Q96EX1 92 aa8.61□□□□□ -1.03
TRAPPC4-205ENST00000525079 NUDT11Q96G61 164 aa8.61□□□□□ -1.03
TRAPPC4-205ENST00000525079 KRTAP3-3Q9BYR6 98 aa8.61□□□□□ -1.03
TRAPPC4-205ENST00000525079 KRTAP3-2Q9BYR7 98 aa8.61□□□□□ -1.03
TRAPPC4-205ENST00000525079 DAZ3Q9NR90 486 aaKnown RBP8.61□□□□□ -1.03
TRAPPC4-205ENST00000525079 SMIM17P0DL12 118 aa8.6□□□□□ -1.03
TRAPPC4-205ENST00000525079 CEBPGP53567 150 aa8.6□□□□□ -1.03
TRAPPC4-205ENST00000525079 OCC1Q8TAD7 63 aa8.6□□□□□ -1.03
TRAPPC4-205ENST00000525079 KRTAP17-1Q9BYP8 105 aa8.6□□□□□ -1.03
TRAPPC4-205ENST00000525079 RNASE7Q9H1E1 156 aaKnown RBP8.6□□□□□ -1.03
TRAPPC4-205ENST00000525079 PGPEP1Q9NXJ5 209 aa8.6□□□□□ -1.03
TRAPPC4-205ENST00000525079 KIF25-AS1Q9Y6Z4 181 aa8.6□□□□□ -1.03
TRAPPC4-205ENST00000525079 XKRY2A2RUG3 117 aa8.59□□□□□ -1.03
TRAPPC4-205ENST00000525079 K7EN84 100 aa8.59□□□□□ -1.03
TRAPPC4-205ENST00000525079 MGPP08493 103 aa8.59□□□□□ -1.03
TRAPPC4-205ENST00000525079 LYZL1Q6UWQ5 148 aa8.59□□□□□ -1.03
TRAPPC4-205ENST00000525079 OR10G8Q8NGN5 311 aa8.59□□□□□ -1.03
TRAPPC4-205ENST00000525079 LYPD6BQ8NI32 183 aa8.59□□□□□ -1.03
TRAPPC4-205ENST00000525079 AP1S3Q96PC3 154 aa8.59□□□□□ -1.03
TRAPPC4-205ENST00000525079 BIN3Q9NQY0 253 aa8.59□□□□□ -1.03
TRAPPC4-205ENST00000525079 CDK2AP2O75956 126 aa8.58□□□□□ -1.04
TRAPPC4-205ENST00000525079 CACNG7P62955 275 aa8.58□□□□□ -1.04
TRAPPC4-205ENST00000525079 TOR2AQ5JU69 321 aa8.58□□□□□ -1.04
TRAPPC4-205ENST00000525079 NIT1Q86X76 327 aa8.58□□□□□ -1.04
TRAPPC4-205ENST00000525079 URGCP-MRPS24S4R325 110 aa8.58□□□□□ -1.04
TRAPPC4-205ENST00000525079 LRCOL1A6NCL2 159 aa8.57□□□□□ -1.04
TRAPPC4-205ENST00000525079 F2Z2F3 143 aa8.57□□□□□ -1.04
TRAPPC4-205ENST00000525079 DNAJC30Q96LL9 226 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms