RNA–Protein interactions for RNA: ENST00000524442.1

TTC39A-213, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 3

Gene TTC39A, Length 413 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-213ENST00000524442 FAM231DQ6ZW35 169 aa6.97□□□□□ -1.29
TTC39A-213ENST00000524442 SAMD10Q9BYL1 202 aa6.97□□□□□ -1.29
TTC39A-213ENST00000524442 RPP21Q9H633 154 aaKnown RBP6.97□□□□□ -1.29
TTC39A-213ENST00000524442 JPT2Q9H910 190 aa6.97□□□□□ -1.29
TTC39A-213ENST00000524442 HYDINQ4G0P3 5121 aa6.97□□□□□ -1.29
TTC39A-213ENST00000524442 VPS13DQ5THJ4 4388 aa6.96□□□□□ -1.29
TTC39A-213ENST00000524442 M0R2N4 97 aa6.96□□□□□ -1.3
TTC39A-213ENST00000524442 SIVA1O15304 175 aa6.96□□□□□ -1.3
TTC39A-213ENST00000524442 BTF3P20290 206 aaKnown RBP6.96□□□□□ -1.3
TTC39A-213ENST00000524442 RAB14P61106 215 aa6.96□□□□□ -1.3
TTC39A-213ENST00000524442 FAM74A4Q5TZK3 123 aa6.96□□□□□ -1.3
TTC39A-213ENST00000524442 WDR73Q6P4I2 378 aa6.96□□□□□ -1.3
TTC39A-213ENST00000524442 Q6ZSN1 163 aa6.96□□□□□ -1.3
TTC39A-213ENST00000524442 LINC00336Q6ZUF6 198 aa6.96□□□□□ -1.3
TTC39A-213ENST00000524442 NACAE9PAV3 2078 aa6.96□□□□□ -1.3
TTC39A-213ENST00000524442 A0A087WWL8 130 aa6.95□□□□□ -1.3
TTC39A-213ENST00000524442 TRBV10-1A0A0K0K1A3 114 aa6.95□□□□□ -1.3
TTC39A-213ENST00000524442 LOC100131303A0A0U1RQF7 123 aa6.95□□□□□ -1.3
TTC39A-213ENST00000524442 K7EP13 123 aa6.95□□□□□ -1.3
TTC39A-213ENST00000524442 GZMBP10144 247 aa6.95□□□□□ -1.3
TTC39A-213ENST00000524442 RAB4BP61018 213 aa6.95□□□□□ -1.3
TTC39A-213ENST00000524442 CT83Q5H943 113 aa6.95□□□□□ -1.3
TTC39A-213ENST00000524442 C1orf134Q5TEV5 83 aa6.95□□□□□ -1.3
TTC39A-213ENST00000524442 LINC01551Q86U37 167 aa6.95□□□□□ -1.3
TTC39A-213ENST00000524442 AP1S3Q96PC3 154 aa6.95□□□□□ -1.3
TTC39A-213ENST00000524442 RNASE7Q9H1E1 156 aaKnown RBP6.95□□□□□ -1.3
TTC39A-213ENST00000524442 A8MWL6 223 aa6.94□□□□□ -1.3
TTC39A-213ENST00000524442 GATCO43716 136 aaKnown RBP6.94□□□□□ -1.3
TTC39A-213ENST00000524442 SMIM17P0DL12 118 aa6.94□□□□□ -1.3
TTC39A-213ENST00000524442 LINC00694P0DN24 101 aa6.94□□□□□ -1.3
TTC39A-213ENST00000524442 CTRLP40313 264 aa6.94□□□□□ -1.3
TTC39A-213ENST00000524442 ERVFC1-1P60608 527 aa6.94□□□□□ -1.3
TTC39A-213ENST00000524442 TMEM241Q24JQ0 296 aa6.94□□□□□ -1.3
TTC39A-213ENST00000524442 ATP6V0E2Q8NHE4 81 aa6.94□□□□□ -1.3
TTC39A-213ENST00000524442 TPPP3Q9BW30 176 aa6.94□□□□□ -1.3
TTC39A-213ENST00000524442 CNFNQ9BYD5 112 aa6.94□□□□□ -1.3
TTC39A-213ENST00000524442 GTSF1LQ9H1H1 148 aa6.94□□□□□ -1.3
TTC39A-213ENST00000524442 TRAV9-2A0A087WT02 112 aa6.93□□□□□ -1.3
TTC39A-213ENST00000524442 TRAV8-6A0A0B4J262 113 aa6.93□□□□□ -1.3
TTC39A-213ENST00000524442 MUC21A0A0G2JKD1 596 aa6.93□□□□□ -1.3
TTC39A-213ENST00000524442 MUC21A0A140T8X8 626 aa6.93□□□□□ -1.3
TTC39A-213ENST00000524442 TRGC1P0CF51 173 aa6.93□□□□□ -1.3
TTC39A-213ENST00000524442 LYZL1Q6UWQ5 148 aa6.93□□□□□ -1.3
TTC39A-213ENST00000524442 C14orf178Q8N769 122 aaPredicted RBP6.93□□□□□ -1.3
TTC39A-213ENST00000524442 OSTCQ9NRP0 149 aa6.93□□□□□ -1.3
TTC39A-213ENST00000524442 A0A087WWC5 75 aa6.92□□□□□ -1.3
TTC39A-213ENST00000524442 FAM231BA6NCW3 169 aa6.92□□□□□ -1.3
TTC39A-213ENST00000524442 GAGE12JA6NER3 117 aa6.92□□□□□ -1.3
TTC39A-213ENST00000524442 C9JQL5 133 aa6.92□□□□□ -1.3
TTC39A-213ENST00000524442 RTL8CO15255 209 aa6.92□□□□□ -1.3
TTC39A-213ENST00000524442 DNAH10OSP0CZ25 163 aa6.92□□□□□ -1.3
TTC39A-213ENST00000524442 NTF3P20783 257 aa6.92□□□□□ -1.3
TTC39A-213ENST00000524442 EVI2AP22794 236 aa6.92□□□□□ -1.3
TTC39A-213ENST00000524442 FOXA3P55318 350 aaPredicted RBP6.92□□□□□ -1.3
TTC39A-213ENST00000524442 RPL36AP83881 106 aaKnown RBP6.92□□□□□ -1.3
TTC39A-213ENST00000524442 GAGE1Q13065 139 aa6.92□□□□□ -1.3
TTC39A-213ENST00000524442 GAGE4Q13068 117 aa6.92□□□□□ -1.3
TTC39A-213ENST00000524442 GAGE5Q13069 117 aa6.92□□□□□ -1.3
TTC39A-213ENST00000524442 ZNF56Q15929 161 aa6.92□□□□□ -1.3
TTC39A-213ENST00000524442 GAGE13Q4V321 117 aa6.92□□□□□ -1.3
TTC39A-213ENST00000524442 LELP1Q5T871 98 aa6.92□□□□□ -1.3
TTC39A-213ENST00000524442 C6orf223Q8N319 242 aa6.92□□□□□ -1.3
TTC39A-213ENST00000524442 C15orf54Q8N8G6 183 aa6.92□□□□□ -1.3
TTC39A-213ENST00000524442 OR10G8Q8NGN5 311 aa6.92□□□□□ -1.3
TTC39A-213ENST00000524442 RPL36ALQ969Q0 106 aaKnown RBP6.92□□□□□ -1.3
TTC39A-213ENST00000524442 GFRA4Q9GZZ7 299 aa6.92□□□□□ -1.3
TTC39A-213ENST00000524442 NAT8Q9UHE5 227 aa6.92□□□□□ -1.3
TTC39A-213ENST00000524442 KIF25-AS1Q9Y6Z4 181 aa6.92□□□□□ -1.3
TTC39A-213ENST00000524442 TRBV7-3A0A075B6L6 115 aa6.91□□□□□ -1.3
TTC39A-213ENST00000524442 F5H697 171 aa6.91□□□□□ -1.3
TTC39A-213ENST00000524442 H7C1H1 209 aa6.91□□□□□ -1.3
TTC39A-213ENST00000524442 LINC00315P59091 139 aa6.91□□□□□ -1.3
TTC39A-213ENST00000524442 SSTP61278 116 aa6.91□□□□□ -1.3
TTC39A-213ENST00000524442 SRSF3P84103 164 aaKnown RBP6.91□□□□□ -1.3
TTC39A-213ENST00000524442 CLLU1Q5K131 121 aa6.91□□□□□ -1.3
TTC39A-213ENST00000524442 C10orf126Q8N4M7 172 aa6.91□□□□□ -1.3
TTC39A-213ENST00000524442 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.91□□□□□ -1.3
TTC39A-213ENST00000524442 TSKUQ8WUA8 353 aa6.91□□□□□ -1.3
TTC39A-213ENST00000524442 GTSF1Q8WW33 167 aa6.91□□□□□ -1.3
TTC39A-213ENST00000524442 ISOC2Q96AB3 205 aa6.91□□□□□ -1.3
TTC39A-213ENST00000524442 IGHV3-38A0A0C4DH36 116 aa6.9□□□□□ -1.3
TTC39A-213ENST00000524442 UBE2D3P61077 147 aa6.9□□□□□ -1.3
TTC39A-213ENST00000524442 RPL23P62829 140 aaKnown RBP6.9□□□□□ -1.3
TTC39A-213ENST00000524442 UBE2D2P62837 147 aa6.9□□□□□ -1.3
TTC39A-213ENST00000524442 TWIST1Q15672 202 aa6.9□□□□□ -1.3
TTC39A-213ENST00000524442 OR10J3Q5JRS4 329 aa6.9□□□□□ -1.3
TTC39A-213ENST00000524442 SMIM15Q7Z3B0 74 aa6.9□□□□□ -1.3
TTC39A-213ENST00000524442 WFDC10BQ8IUB3 73 aa6.9□□□□□ -1.3
TTC39A-213ENST00000524442 BORCS7Q96B45 105 aa6.9□□□□□ -1.3
TTC39A-213ENST00000524442 KRTAP1-5Q9BYS1 174 aa6.9□□□□□ -1.3
TTC39A-213ENST00000524442 DPH3P1Q9H4G8 78 aa6.9□□□□□ -1.3
TTC39A-213ENST00000524442 MSRB1Q9NZV6 116 aa6.9□□□□□ -1.3
TTC39A-213ENST00000524442 Q9UF83 564 aa6.9□□□□□ -1.3
TTC39A-213ENST00000524442 DNAH6Q9C0G6 4158 aa6.89□□□□□ -1.31
TTC39A-213ENST00000524442 PRSS29PA6NIE9 313 aa6.89□□□□□ -1.31
TTC39A-213ENST00000524442 ADIRFQ15847 76 aa6.89□□□□□ -1.31
TTC39A-213ENST00000524442 LINC01556Q5JQF7 62 aa6.89□□□□□ -1.31
TTC39A-213ENST00000524442 NEXN-AS1Q8NBZ9 246 aa6.89□□□□□ -1.31
TTC39A-213ENST00000524442 DNAJC30Q96LL9 226 aa6.89□□□□□ -1.31
TTC39A-213ENST00000524442 HIGD1CA8MV81 97 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 218.5 ms