RNA–Protein interactions for RNA: ENST00000523877.1

SDC2-208, Transcript of syndecan 2, humanhuman

TSL 5

Gene SDC2, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-208ENST00000523877 LTBP2Q14767 1821 aa4.72□□□□□ -1.65
SDC2-208ENST00000523877 AGRNO00468 2067 aa4.71□□□□□ -1.65
SDC2-208ENST00000523877 THADAQ6YHU6 1953 aa4.71□□□□□ -1.66
SDC2-208ENST00000523877 PCDH15Q96QU1 1955 aa4.71□□□□□ -1.66
SDC2-208ENST00000523877 CACNA1BQ00975 2339 aa4.71□□□□□ -1.66
SDC2-208ENST00000523877 IGKV1-12A0A0C4DH73 117 aa4.71□□□□□ -1.66
SDC2-208ENST00000523877 E7EUB6 86 aa4.71□□□□□ -1.66
SDC2-208ENST00000523877 IGKV1D-12P01611 117 aa4.71□□□□□ -1.66
SDC2-208ENST00000523877 RPL27AP46776 148 aaKnown RBP4.71□□□□□ -1.66
SDC2-208ENST00000523877 SPINT3P49223 89 aa4.71□□□□□ -1.66
SDC2-208ENST00000523877 SPTSSBQ8NFR3 76 aa4.71□□□□□ -1.66
SDC2-208ENST00000523877 UBALD1Q8TB05 177 aa4.71□□□□□ -1.66
SDC2-208ENST00000523877 BPESC1Q9GZL8 116 aa4.71□□□□□ -1.66
SDC2-208ENST00000523877 C11orf21Q9P2W6 132 aa4.71□□□□□ -1.66
SDC2-208ENST00000523877 CHD8Q9HCK8 2581 aa4.71□□□□□ -1.66
SDC2-208ENST00000523877 REV3LO60673 3130 aa4.71□□□□□ -1.66
SDC2-208ENST00000523877 WDFY4Q6ZS81 3184 aa4.71□□□□□ -1.66
SDC2-208ENST00000523877 IGHV1OR15-1A0A075B7D0 117 aa4.7□□□□□ -1.66
SDC2-208ENST00000523877 IGHV4-28A0A0C4DH34 117 aa4.7□□□□□ -1.66
SDC2-208ENST00000523877 HCG22E2RYF7 251 aa4.7□□□□□ -1.66
SDC2-208ENST00000523877 IGHV3-33P01772 117 aa4.7□□□□□ -1.66
SDC2-208ENST00000523877 PI3P19957 117 aa4.7□□□□□ -1.66
SDC2-208ENST00000523877 EDDM3BP56851 147 aa4.7□□□□□ -1.66
SDC2-208ENST00000523877 EIF4EBP1Q13541 118 aaPredicted RBP4.7□□□□□ -1.66
SDC2-208ENST00000523877 FAM229BQ4G0N7 80 aa4.7□□□□□ -1.66
SDC2-208ENST00000523877 CRIP3Q6Q6R5 217 aa4.7□□□□□ -1.66
SDC2-208ENST00000523877 LYZL2Q7Z4W2 148 aa4.7□□□□□ -1.66
SDC2-208ENST00000523877 WFDC6Q9BQY6 131 aa4.7□□□□□ -1.66
SDC2-208ENST00000523877 LIMD2Q9BT23 127 aa4.7□□□□□ -1.66
SDC2-208ENST00000523877 CELA1Q9UNI1 258 aa4.7□□□□□ -1.66
SDC2-208ENST00000523877 TANC2Q9HCD6 1990 aa4.7□□□□□ -1.66
SDC2-208ENST00000523877 EPG5Q9HCE0 2579 aa4.7□□□□□ -1.66
SDC2-208ENST00000523877 ZDBF2Q9HCK1 2354 aa4.7□□□□□ -1.66
SDC2-208ENST00000523877 IGLV3-9A0A075B6K5 115 aa4.69□□□□□ -1.66
SDC2-208ENST00000523877 IGKV6D-21A0A0A0MT36 114 aa4.69□□□□□ -1.66
SDC2-208ENST00000523877 TRAV22A0A0B4J277 110 aa4.69□□□□□ -1.66
SDC2-208ENST00000523877 C16orf90A8MZG2 172 aa4.69□□□□□ -1.66
SDC2-208ENST00000523877 C5orf67F2Z3F1 127 aa4.69□□□□□ -1.66
SDC2-208ENST00000523877 DNAL4O96015 105 aa4.69□□□□□ -1.66
SDC2-208ENST00000523877 FXYD7P58549 80 aa4.69□□□□□ -1.66
SDC2-208ENST00000523877 Q1RN00 199 aa4.69□□□□□ -1.66
SDC2-208ENST00000523877 FAM53AQ6NSI3 398 aaPredicted RBP4.69□□□□□ -1.66
SDC2-208ENST00000523877 TMEM61Q8N0U2 210 aa4.69□□□□□ -1.66
SDC2-208ENST00000523877 RETNLBQ9BQ08 111 aa4.69□□□□□ -1.66
SDC2-208ENST00000523877 FGF22Q9HCT0 170 aa4.69□□□□□ -1.66
SDC2-208ENST00000523877 CDC42SE1Q9NRR8 79 aa4.69□□□□□ -1.66
SDC2-208ENST00000523877 PSENENQ9NZ42 101 aa4.69□□□□□ -1.66
SDC2-208ENST00000523877 LCTP09848 1927 aa4.68□□□□□ -1.66
SDC2-208ENST00000523877 hDV103S1A0JD37 113 aa4.68□□□□□ -1.66
SDC2-208ENST00000523877 K7EQD1 137 aa4.68□□□□□ -1.66
SDC2-208ENST00000523877 IGHV4-39P01824 125 aa4.68□□□□□ -1.66
SDC2-208ENST00000523877 IGHV4-30-4P0DP06 118 aa4.68□□□□□ -1.66
SDC2-208ENST00000523877 IGHV1-2P23083 117 aa4.68□□□□□ -1.66
SDC2-208ENST00000523877 SFTA2Q6UW10 78 aa4.68□□□□□ -1.66
SDC2-208ENST00000523877 PFN4Q8NHR9 129 aa4.68□□□□□ -1.66
SDC2-208ENST00000523877 LINC00597Q9H2U6 94 aa4.68□□□□□ -1.66
SDC2-208ENST00000523877 SND1-IT1Q9HBX3 110 aa4.68□□□□□ -1.66
SDC2-208ENST00000523877 LRRK1Q38SD2 2015 aa4.68□□□□□ -1.66
SDC2-208ENST00000523877 CFAP47Q6ZTR5 3102 aa4.67□□□□□ -1.66
SDC2-208ENST00000523877 SDHAF1A6NFY7 115 aa4.67□□□□□ -1.66
SDC2-208ENST00000523877 PATE3B3GLJ2 98 aa4.67□□□□□ -1.66
SDC2-208ENST00000523877 PRSS2P07478 247 aa4.67□□□□□ -1.66
SDC2-208ENST00000523877 C15orf32Q32M92 178 aa4.67□□□□□ -1.66
SDC2-208ENST00000523877 C9orf116Q5BN46 136 aaPredicted RBP4.67□□□□□ -1.66
SDC2-208ENST00000523877 Q6ZRP5 223 aa4.67□□□□□ -1.66
SDC2-208ENST00000523877 TMEM167BQ9NRX6 74 aa4.67□□□□□ -1.66
SDC2-208ENST00000523877 TIMM8BQ9Y5J9 83 aaPredicted RBP4.67□□□□□ -1.66
SDC2-208ENST00000523877 PLXNB2O15031 1838 aa4.67□□□□□ -1.66
SDC2-208ENST00000523877 COL4A6Q14031 1691 aa4.67□□□□□ -1.66
SDC2-208ENST00000523877 IGLV3-12A0A075B6K2 115 aa4.66□□□□□ -1.66
SDC2-208ENST00000523877 IGHV3-72A0A0B4J1Y9 119 aa4.66□□□□□ -1.66
SDC2-208ENST00000523877 IGKV6-21A0A0C4DH24 114 aa4.66□□□□□ -1.66
SDC2-208ENST00000523877 IGHV3-16A0A0C4DH30 117 aa4.66□□□□□ -1.66
SDC2-208ENST00000523877 HIGD1CA8MV81 97 aa4.66□□□□□ -1.66
SDC2-208ENST00000523877 K7EMI3 77 aa4.66□□□□□ -1.66
SDC2-208ENST00000523877 IGKV1D-33P01593 117 aa4.66□□□□□ -1.66
SDC2-208ENST00000523877 IGKV1-33P01594 117 aa4.66□□□□□ -1.66
SDC2-208ENST00000523877 IGHV3-48P01763 117 aa4.66□□□□□ -1.66
SDC2-208ENST00000523877 NOVP48745 357 aa4.66□□□□□ -1.66
SDC2-208ENST00000523877 FXYD3Q14802 87 aa4.66□□□□□ -1.66
SDC2-208ENST00000523877 LCE5AQ5TCM9 118 aa4.66□□□□□ -1.66
SDC2-208ENST00000523877 Q6ZR03 302 aa4.66□□□□□ -1.66
SDC2-208ENST00000523877 TMEM263Q8WUH6 116 aaKnown RBP4.66□□□□□ -1.66
SDC2-208ENST00000523877 LINC00467Q9BRT7 94 aa4.66□□□□□ -1.66
SDC2-208ENST00000523877 TMEM14AQ9Y6G1 99 aa4.66□□□□□ -1.66
SDC2-208ENST00000523877 MYO7AQ13402 2215 aa4.66□□□□□ -1.66
SDC2-208ENST00000523877 PLXNA2O75051 1894 aa4.66□□□□□ -1.66
SDC2-208ENST00000523877 ATRXP46100 2492 aa4.66□□□□□ -1.66
SDC2-208ENST00000523877 MYO9BQ13459 2157 aa4.65□□□□□ -1.66
SDC2-208ENST00000523877 TRAV12-1A0A0B4J245 112 aa4.65□□□□□ -1.67
SDC2-208ENST00000523877 IGHV3-20A0A0C4DH32 117 aa4.65□□□□□ -1.67
SDC2-208ENST00000523877 IGHV4-61A0A0C4DH41 118 aa4.65□□□□□ -1.67
SDC2-208ENST00000523877 LINC01546A6NGU7 62 aa4.65□□□□□ -1.67
SDC2-208ENST00000523877 KRTAP16-1A8MUX0 517 aa4.65□□□□□ -1.67
SDC2-208ENST00000523877 CHKB-CPT1BH3BT56 60 aa4.65□□□□□ -1.67
SDC2-208ENST00000523877 IGHV4-59P01825 116 aa4.65□□□□□ -1.67
SDC2-208ENST00000523877 BGLAPP02818 100 aa4.65□□□□□ -1.67
SDC2-208ENST00000523877 PRSS1P07477 247 aa4.65□□□□□ -1.67
SDC2-208ENST00000523877 BRWD1-AS2P59051 145 aa4.65□□□□□ -1.67
SDC2-208ENST00000523877 TFF2Q03403 129 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms