RNA–Protein interactions for RNA: ENST00000521941.1

CTNNA1-231, Transcript of catenin alpha 1, human

TSL 3

Gene CTNNA1, Length 224 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-231	ENST00000521941	SNAI2	O43623	268 aa		5.72	□□□□□ -1.49
CTNNA1-231	ENST00000521941	MGP	P08493	103 aa		5.72	□□□□□ -1.49
CTNNA1-231	ENST00000521941	LINC00315	P59091	139 aa		5.72	□□□□□ -1.49
CTNNA1-231	ENST00000521941	OR10J3	Q5JRS4	329 aa		5.72	□□□□□ -1.49
CTNNA1-231	ENST00000521941	PIK3CD-AS1	Q5SR53	167 aa		5.72	□□□□□ -1.49
CTNNA1-231	ENST00000521941	ZFP2	Q6ZN57	461 aa		5.72	□□□□□ -1.49
CTNNA1-231	ENST00000521941	FER1L6-AS1	Q8NA97	138 aa		5.72	□□□□□ -1.49
CTNNA1-231	ENST00000521941	ATP6V0E2	Q8NHE4	81 aa		5.72	□□□□□ -1.49
CTNNA1-231	ENST00000521941	SMIM12	Q96EX1	92 aa		5.72	□□□□□ -1.49
CTNNA1-231	ENST00000521941	RNASE7	Q9H1E1	156 aa	Known RBP	5.72	□□□□□ -1.49
CTNNA1-231	ENST00000521941	BIN3	Q9NQY0	253 aa		5.72	□□□□□ -1.49
CTNNA1-231	ENST00000521941		Q9UF83	564 aa		5.72	□□□□□ -1.49
CTNNA1-231	ENST00000521941	LY96	Q9Y6Y9	160 aa		5.72	□□□□□ -1.49
CTNNA1-231	ENST00000521941	XKRY2	A2RUG3	117 aa		5.71	□□□□□ -1.5
CTNNA1-231	ENST00000521941	TMEM250	H0YL14	139 aa		5.71	□□□□□ -1.5
CTNNA1-231	ENST00000521941		K7EN84	100 aa		5.71	□□□□□ -1.5
CTNNA1-231	ENST00000521941	CRYGD	P07320	174 aa		5.71	□□□□□ -1.5
CTNNA1-231	ENST00000521941	OR5AL1	P0C617	328 aa		5.71	□□□□□ -1.5
CTNNA1-231	ENST00000521941	RPS20	P60866	119 aa	Known RBP	5.71	□□□□□ -1.5
CTNNA1-231	ENST00000521941	TNP2	Q05952	138 aa		5.71	□□□□□ -1.5
CTNNA1-231	ENST00000521941	UFSP1	Q6NVU6	142 aa		5.71	□□□□□ -1.5
CTNNA1-231	ENST00000521941	SH2D6	Q7Z4S9	175 aa		5.71	□□□□□ -1.5
CTNNA1-231	ENST00000521941	NUDT10	Q8NFP7	164 aa		5.71	□□□□□ -1.5
CTNNA1-231	ENST00000521941	LYPD6B	Q8NI32	183 aa		5.71	□□□□□ -1.5
CTNNA1-231	ENST00000521941	OCC1	Q8TAD7	63 aa		5.71	□□□□□ -1.5
CTNNA1-231	ENST00000521941	NUDT11	Q96G61	164 aa		5.71	□□□□□ -1.5
CTNNA1-231	ENST00000521941	FAM210A	Q96ND0	272 aa		5.71	□□□□□ -1.5
CTNNA1-231	ENST00000521941	AP1S3	Q96PC3	154 aa		5.71	□□□□□ -1.5
CTNNA1-231	ENST00000521941	TRAV8-6	A0A0B4J262	113 aa		5.7	□□□□□ -1.5
CTNNA1-231	ENST00000521941		A0A1W2PPQ1	181 aa		5.7	□□□□□ -1.5
CTNNA1-231	ENST00000521941		F5H697	171 aa		5.7	□□□□□ -1.5
CTNNA1-231	ENST00000521941	IGHV3-30	P01768	117 aa		5.7	□□□□□ -1.5
CTNNA1-231	ENST00000521941	IGHV3-33	P01772	117 aa		5.7	□□□□□ -1.5
CTNNA1-231	ENST00000521941	IGLC6	P0CF74	106 aa		5.7	□□□□□ -1.5
CTNNA1-231	ENST00000521941	SMIM17	P0DL12	118 aa		5.7	□□□□□ -1.5
CTNNA1-231	ENST00000521941	IGHV3-30-3	P0DP02	117 aa		5.7	□□□□□ -1.5
CTNNA1-231	ENST00000521941	IGHV3-30-5	P0DP03	117 aa		5.7	□□□□□ -1.5
CTNNA1-231	ENST00000521941	EVI2A	P22794	236 aa		5.7	□□□□□ -1.5
CTNNA1-231	ENST00000521941	TEX261	Q6UWH6	196 aa		5.7	□□□□□ -1.5
CTNNA1-231	ENST00000521941	SMIM7	Q9BQ49	75 aa		5.7	□□□□□ -1.5
CTNNA1-231	ENST00000521941	GTSF1L	Q9H1H1	148 aa		5.7	□□□□□ -1.5
CTNNA1-231	ENST00000521941	RPP21	Q9H633	154 aa	Known RBP	5.7	□□□□□ -1.5
CTNNA1-231	ENST00000521941	TNFRSF18	Q9Y5U5	241 aa		5.7	□□□□□ -1.5
CTNNA1-231	ENST00000521941	DNAH2	Q9P225	4427 aa		5.69	□□□□□ -1.5
CTNNA1-231	ENST00000521941	IGHV3-38	A0A0C4DH36	116 aa		5.69	□□□□□ -1.5
CTNNA1-231	ENST00000521941		A0A1B0GVY2	172 aa		5.69	□□□□□ -1.5
CTNNA1-231	ENST00000521941	ZNF727	A8MUV8	499 aa		5.69	□□□□□ -1.5
CTNNA1-231	ENST00000521941	GATC	O43716	136 aa	Known RBP	5.69	□□□□□ -1.5
CTNNA1-231	ENST00000521941	LINC00694	P0DN24	101 aa		5.69	□□□□□ -1.5
CTNNA1-231	ENST00000521941	RPL36A	P83881	106 aa	Known RBP	5.69	□□□□□ -1.5
CTNNA1-231	ENST00000521941	LELP1	Q5T871	98 aa		5.69	□□□□□ -1.5
CTNNA1-231	ENST00000521941	LYZL1	Q6UWQ5	148 aa		5.69	□□□□□ -1.5
CTNNA1-231	ENST00000521941	RPL36AL	Q969Q0	106 aa	Known RBP	5.69	□□□□□ -1.5
CTNNA1-231	ENST00000521941	SSBP4	Q9BWG4	385 aa	Predicted RBP	5.69	□□□□□ -1.5
CTNNA1-231	ENST00000521941	MSRB1	Q9NZV6	116 aa		5.69	□□□□□ -1.5
CTNNA1-231	ENST00000521941	TRAV9-2	A0A087WT02	112 aa		5.68	□□□□□ -1.5
CTNNA1-231	ENST00000521941	SRP19	P09132	144 aa	Known RBP	5.68	□□□□□ -1.5
CTNNA1-231	ENST00000521941	DNAH10OS	P0CZ25	163 aa		5.68	□□□□□ -1.5
CTNNA1-231	ENST00000521941	TIRAP	P58753	221 aa		5.68	□□□□□ -1.5
CTNNA1-231	ENST00000521941	ERVFC1-1	P60608	527 aa		5.68	□□□□□ -1.5
CTNNA1-231	ENST00000521941	CACNG7	P62955	275 aa		5.68	□□□□□ -1.5
CTNNA1-231	ENST00000521941		Q8N3U1	123 aa		5.68	□□□□□ -1.5
CTNNA1-231	ENST00000521941	NEXN-AS1	Q8NBZ9	246 aa		5.68	□□□□□ -1.5
CTNNA1-231	ENST00000521941		Q9HAA7	133 aa		5.68	□□□□□ -1.5
CTNNA1-231	ENST00000521941	HECTD4	Q9Y4D8	3996 aa		5.68	□□□□□ -1.5
CTNNA1-231	ENST00000521941	BIRC6	Q9NR09	4857 aa		5.67	□□□□□ -1.5
CTNNA1-231	ENST00000521941	TRGC1	P0CF51	173 aa		5.67	□□□□□ -1.5
CTNNA1-231	ENST00000521941	NTF3	P20783	257 aa		5.67	□□□□□ -1.5
CTNNA1-231	ENST00000521941	RAB4B	P61018	213 aa		5.67	□□□□□ -1.5
CTNNA1-231	ENST00000521941	SRSF3	P84103	164 aa	Known RBP	5.67	□□□□□ -1.5
CTNNA1-231	ENST00000521941	C10orf126	Q8N4M7	172 aa		5.67	□□□□□ -1.5
CTNNA1-231	ENST00000521941	FAT2	Q9NYQ8	4349 aa		5.67	□□□□□ -1.5
CTNNA1-231	ENST00000521941	TRBV7-3	A0A075B6L6	115 aa		5.66	□□□□□ -1.5
CTNNA1-231	ENST00000521941	TRBV10-1	A0A0K0K1A3	114 aa		5.66	□□□□□ -1.5
CTNNA1-231	ENST00000521941		C9JQL5	133 aa		5.66	□□□□□ -1.5
CTNNA1-231	ENST00000521941		F2Z2F3	143 aa		5.66	□□□□□ -1.5
CTNNA1-231	ENST00000521941	CTRL	P40313	264 aa		5.66	□□□□□ -1.5
CTNNA1-231	ENST00000521941	UBE2D3	P61077	147 aa		5.66	□□□□□ -1.5
CTNNA1-231	ENST00000521941	UBE2D2	P62837	147 aa		5.66	□□□□□ -1.5
CTNNA1-231	ENST00000521941	TWIST1	Q15672	202 aa		5.66	□□□□□ -1.5
CTNNA1-231	ENST00000521941	ADIRF	Q15847	76 aa		5.66	□□□□□ -1.5
CTNNA1-231	ENST00000521941	LINC01556	Q5JQF7	62 aa		5.66	□□□□□ -1.5
CTNNA1-231	ENST00000521941	SUMO4	Q6EEV6	95 aa		5.66	□□□□□ -1.5
CTNNA1-231	ENST00000521941	LINC01551	Q86U37	167 aa		5.66	□□□□□ -1.5
CTNNA1-231	ENST00000521941	PGLYRP4	Q96LB8	373 aa		5.66	□□□□□ -1.5
CTNNA1-231	ENST00000521941		A0A087WWC5	75 aa		5.65	□□□□□ -1.5
CTNNA1-231	ENST00000521941		A8MWL6	223 aa		5.65	□□□□□ -1.5
CTNNA1-231	ENST00000521941	PSCA	O43653	123 aa		5.65	□□□□□ -1.5
CTNNA1-231	ENST00000521941	PEA15	Q15121	130 aa		5.65	□□□□□ -1.5
CTNNA1-231	ENST00000521941		Q6ZRN7	208 aa	Predicted RBP	5.65	□□□□□ -1.5
CTNNA1-231	ENST00000521941	FAM231D	Q6ZW35	169 aa		5.65	□□□□□ -1.5
CTNNA1-231	ENST00000521941	SPATA12	Q7Z6I5	190 aa		5.65	□□□□□ -1.5
CTNNA1-231	ENST00000521941	DAZ4	Q86SG3	579 aa	Known RBP	5.65	□□□□□ -1.5
CTNNA1-231	ENST00000521941	NFE4	Q86UQ8	179 aa		5.65	□□□□□ -1.5
CTNNA1-231	ENST00000521941	GTSF1	Q8WW33	167 aa		5.65	□□□□□ -1.5
CTNNA1-231	ENST00000521941	DPH3P1	Q9H4G8	78 aa		5.65	□□□□□ -1.5
CTNNA1-231	ENST00000521941	DAZ3	Q9NR90	486 aa	Known RBP	5.65	□□□□□ -1.5
CTNNA1-231	ENST00000521941	KIF25-AS1	Q9Y6Z4	181 aa		5.65	□□□□□ -1.5
CTNNA1-231	ENST00000521941	URGCP-MRPS24	S4R325	110 aa		5.65	□□□□□ -1.5
CTNNA1-231	ENST00000521941	DNAH17	Q9UFH2	4485 aa		5.64	□□□□□ -1.51

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