RNA–Protein interactions for RNA: ENST00000521425.5

TRAM1-205, Transcript of translocation associated membrane protein 1, humanhuman

TSL 2 BASIC

Gene TRAM1, Length 3,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-205ENST00000521425 PIFOQ8TCI5 191 aa13.31□□□□□ -0.28
TRAM1-205ENST00000521425 FOXI1Q12951 378 aa13.3□□□□□ -0.28
TRAM1-205ENST00000521425 TMEM158Q8WZ71 300 aa13.3□□□□□ -0.28
TRAM1-205ENST00000521425 HBDP02042 147 aa13.3□□□□□ -0.28
TRAM1-205ENST00000521425 PDE6HQ13956 83 aa13.3□□□□□ -0.28
TRAM1-205ENST00000521425 LYPD1Q8N2G4 141 aa13.3□□□□□ -0.28
TRAM1-205ENST00000521425 OR11H12B2RN74 326 aa13.29□□□□□ -0.28
TRAM1-205ENST00000521425 TNFRSF6BO95407 300 aa13.29□□□□□ -0.28
TRAM1-205ENST00000521425 CT83Q5H943 113 aa13.29□□□□□ -0.28
TRAM1-205ENST00000521425 ZFAND6Q6FIF0 208 aa13.29□□□□□ -0.28
TRAM1-205ENST00000521425 C1orf122Q6ZSJ8 110 aa13.29□□□□□ -0.28
TRAM1-205ENST00000521425 OR11H1Q8NG94 326 aa13.29□□□□□ -0.28
TRAM1-205ENST00000521425 OR11H2Q8NH07 326 aa13.29□□□□□ -0.28
TRAM1-205ENST00000521425 CDIP1Q9H305 208 aa13.29□□□□□ -0.28
TRAM1-205ENST00000521425 KLK9Q9UKQ9 250 aa13.29□□□□□ -0.28
TRAM1-205ENST00000521425 UBR5O95071 2799 aaPredicted RBP13.29□□□□□ -0.28
TRAM1-205ENST00000521425 TRBV25-1A0A075B6N4 114 aa13.29□□□□□ -0.28
TRAM1-205ENST00000521425 TRAV8-2A0A0B4J237 113 aa13.29□□□□□ -0.28
TRAM1-205ENST00000521425 RPL32P62910 135 aaKnown RBP13.29□□□□□ -0.28
TRAM1-205ENST00000521425 C10orf105Q8TEF2 133 aa13.29□□□□□ -0.28
TRAM1-205ENST00000521425 GFRA4Q9GZZ7 299 aa13.29□□□□□ -0.28
TRAM1-205ENST00000521425 MAP1LC3AQ9H492 121 aa13.29□□□□□ -0.28
TRAM1-205ENST00000521425 IGHV3OR16-12A0A075B7B8 117 aa13.29□□□□□ -0.28
TRAM1-205ENST00000521425 ZC2HC1BQ5TFG8 222 aa13.29□□□□□ -0.28
TRAM1-205ENST00000521425 C12orf74Q32Q52 190 aa13.28□□□□□ -0.28
TRAM1-205ENST00000521425 RPL39LQ96EH5 51 aaKnown RBP13.28□□□□□ -0.28
TRAM1-205ENST00000521425 CCDC179H3BU77 68 aa13.28□□□□□ -0.28
TRAM1-205ENST00000521425 OOSP1A8MZH6 123 aa13.28□□□□□ -0.28
TRAM1-205ENST00000521425 ZNF469Q96JG9 3925 aaPredicted RBP13.27□□□□□ -0.28
TRAM1-205ENST00000521425 FHL3Q13643 280 aa13.27□□□□□ -0.28
TRAM1-205ENST00000521425 CEND1Q8N111 149 aa13.27□□□□□ -0.29
TRAM1-205ENST00000521425 E9PLD3 99 aa13.26□□□□□ -0.29
TRAM1-205ENST00000521425 NFE4Q86UQ8 179 aa13.26□□□□□ -0.29
TRAM1-205ENST00000521425 CD7P09564 240 aa13.26□□□□□ -0.29
TRAM1-205ENST00000521425 C18orf65Q6ZTR6 163 aa13.26□□□□□ -0.29
TRAM1-205ENST00000521425 TM2D2Q9BX73 214 aa13.26□□□□□ -0.29
TRAM1-205ENST00000521425 TEP1Q99973 2627 aaKnown RBP13.25□□□□□ -0.29
TRAM1-205ENST00000521425 TRBV7-1A0A0A6YYK4 115 aa13.25□□□□□ -0.29
TRAM1-205ENST00000521425 EBI3Q14213 229 aa13.25□□□□□ -0.29
TRAM1-205ENST00000521425 SPINK13Q1W4C9 94 aa13.25□□□□□ -0.29
TRAM1-205ENST00000521425 LGALS9BQ3B8N2 356 aa13.25□□□□□ -0.29
TRAM1-205ENST00000521425 LGALS9CQ6DKI2 356 aa13.25□□□□□ -0.29
TRAM1-205ENST00000521425 ZNF256Q9Y2P7 627 aaPredicted RBP13.25□□□□□ -0.29
TRAM1-205ENST00000521425 A0A096LNJ9 63 aa13.25□□□□□ -0.29
TRAM1-205ENST00000521425 BRI3O95415 125 aa13.25□□□□□ -0.29
TRAM1-205ENST00000521425 TTC32Q5I0X7 151 aa13.24□□□□□ -0.29
TRAM1-205ENST00000521425 COX6B1P14854 86 aa13.24□□□□□ -0.29
TRAM1-205ENST00000521425 KNCNA6PVL3 124 aa13.24□□□□□ -0.29
TRAM1-205ENST00000521425 TMEM8BA6NDV4 472 aa13.23□□□□□ -0.29
TRAM1-205ENST00000521425 B4DSR2 109 aa13.23□□□□□ -0.29
TRAM1-205ENST00000521425 SLC50A1Q9BRV3 221 aa13.23□□□□□ -0.29
TRAM1-205ENST00000521425 PHLDA1Q8WV24 401 aaPredicted RBP13.22□□□□□ -0.29
TRAM1-205ENST00000521425 SETXQ7Z333 2677 aaKnown RBP13.22□□□□□ -0.29
TRAM1-205ENST00000521425 ATRQ13535 2644 aa13.22□□□□□ -0.29
TRAM1-205ENST00000521425 MAPKAPK5-AS1Q8N8E1 139 aa13.22□□□□□ -0.29
TRAM1-205ENST00000521425 MRPL35Q9NZE8 188 aaKnown RBP13.21□□□□□ -0.29
TRAM1-205ENST00000521425 H7C2G1 150 aa13.21□□□□□ -0.29
TRAM1-205ENST00000521425 HOXA3O43365 443 aaPredicted RBP13.21□□□□□ -0.29
TRAM1-205ENST00000521425 ZFP2Q6ZN57 461 aa13.21□□□□□ -0.29
TRAM1-205ENST00000521425 IGHV3-64A0A075B6Q5 118 aa13.21□□□□□ -0.3
TRAM1-205ENST00000521425 GAGE12JA6NER3 117 aa13.2□□□□□ -0.3
TRAM1-205ENST00000521425 GAGE7O76087 117 aa13.2□□□□□ -0.3
TRAM1-205ENST00000521425 GAGE12FP0CL80 117 aa13.2□□□□□ -0.3
TRAM1-205ENST00000521425 GAGE12GP0CL81 117 aa13.2□□□□□ -0.3
TRAM1-205ENST00000521425 GAGE12IP0CL82 117 aa13.2□□□□□ -0.3
TRAM1-205ENST00000521425 SCGB1C2P0DMR2 95 aa13.2□□□□□ -0.3
TRAM1-205ENST00000521425 GAGE4Q13068 117 aa13.2□□□□□ -0.3
TRAM1-205ENST00000521425 RRN3P1Q2M238 152 aa13.2□□□□□ -0.3
TRAM1-205ENST00000521425 Q6AWC8 147 aa13.2□□□□□ -0.3
TRAM1-205ENST00000521425 SRSF2Q01130 221 aaKnown RBP13.2□□□□□ -0.3
TRAM1-205ENST00000521425 GAGE2BQ13066 116 aa13.2□□□□□ -0.3
TRAM1-205ENST00000521425 GAGE2EQ4V326 116 aa13.2□□□□□ -0.3
TRAM1-205ENST00000521425 MYOZ3Q8TDC0 251 aa13.2□□□□□ -0.3
TRAM1-205ENST00000521425 GAGE2DQ9UEU5 116 aa13.2□□□□□ -0.3
TRAM1-205ENST00000521425 SCGB1D4Q6XE38 83 aa13.2□□□□□ -0.3
TRAM1-205ENST00000521425 RNF185Q96GF1 192 aa13.2□□□□□ -0.3
TRAM1-205ENST00000521425 FAM159AQ6UWV7 190 aa13.19□□□□□ -0.3
TRAM1-205ENST00000521425 ODF1Q14990 250 aa13.19□□□□□ -0.3
TRAM1-205ENST00000521425 LINC01549A6NIU2 74 aa13.18□□□□□ -0.3
TRAM1-205ENST00000521425 IGKCP01834 107 aa13.18□□□□□ -0.3
TRAM1-205ENST00000521425 TENM4Q6N022 2769 aa13.18□□□□□ -0.3
TRAM1-205ENST00000521425 DAZ1Q9NQZ3 744 aaKnown RBP13.18□□□□□ -0.3
TRAM1-205ENST00000521425 ASIPP42127 132 aa13.17□□□□□ -0.3
TRAM1-205ENST00000521425 SRSF9Q13242 221 aaKnown RBP eCLIP13.17□□□□□ -0.3
TRAM1-205ENST00000521425 PRO0461Q9UI25 63 aa13.17□□□□□ -0.3
TRAM1-205ENST00000521425 SNCGO76070 127 aa13.17□□□□□ -0.3
TRAM1-205ENST00000521425 IGLC6P0CF74 106 aa13.17□□□□□ -0.3
TRAM1-205ENST00000521425 SLURP1P55000 103 aa13.17□□□□□ -0.3
TRAM1-205ENST00000521425 FAM110AQ9BQ89 295 aa13.17□□□□□ -0.3
TRAM1-205ENST00000521425 SMCPP49901 116 aaPredicted RBP13.17□□□□□ -0.3
TRAM1-205ENST00000521425 ZNF56Q15929 161 aa13.17□□□□□ -0.3
TRAM1-205ENST00000521425 Q96MF0 132 aa13.17□□□□□ -0.3
TRAM1-205ENST00000521425 SRSF1Q07955 248 aaKnown RBP eCLIP13.16□□□□□ -0.3
TRAM1-205ENST00000521425 GPHB5Q86YW7 130 aa13.16□□□□□ -0.3
TRAM1-205ENST00000521425 DLX4Q92988 240 aaPredicted RBP13.16□□□□□ -0.3
TRAM1-205ENST00000521425 YAE1D1Q9NRH1 226 aa13.16□□□□□ -0.3
TRAM1-205ENST00000521425 DPF1Q92782 380 aa13.15□□□□□ -0.3
TRAM1-205ENST00000521425 UNC79Q9P2D8 2635 aa13.15□□□□□ -0.3
TRAM1-205ENST00000521425 RNASE13Q5GAN3 156 aaKnown RBP13.15□□□□□ -0.3
TRAM1-205ENST00000521425 PPDPFQ9H3Y8 114 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms