RNA–Protein interactions for RNA: ENST00000520889.1

IGHV4-55-201, Transcript of immunoglobulin heavy variable 4-55 (pseudogene), humanhuman

BASIC

Gene IGHV4-55, Length 368 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-55-201ENST00000520889 UFSP1Q6NVU6 142 aa4.48□□□□□ -1.69
IGHV4-55-201ENST00000520889 RASL11AQ6T310 242 aa4.48□□□□□ -1.69
IGHV4-55-201ENST00000520889 SH2D6Q7Z4S9 175 aa4.48□□□□□ -1.69
IGHV4-55-201ENST00000520889 C15orf53Q8NAA6 179 aa4.48□□□□□ -1.69
IGHV4-55-201ENST00000520889 CLRN3Q8NCR9 226 aa4.48□□□□□ -1.69
IGHV4-55-201ENST00000520889 NUP35Q8NFH5 326 aa4.48□□□□□ -1.69
IGHV4-55-201ENST00000520889 BTF3L4Q96K17 158 aa4.48□□□□□ -1.69
IGHV4-55-201ENST00000520889 AP1S3Q96PC3 154 aa4.48□□□□□ -1.69
IGHV4-55-201ENST00000520889 KIF25-AS1Q9Y6Z4 181 aa4.48□□□□□ -1.69
IGHV4-55-201ENST00000520889 TRGV4A0A0C4DH28 118 aa4.47□□□□□ -1.69
IGHV4-55-201ENST00000520889 TRBV10-1A0A0K0K1A3 114 aa4.47□□□□□ -1.69
IGHV4-55-201ENST00000520889 C7orf77A4D0Y5 90 aa4.47□□□□□ -1.69
IGHV4-55-201ENST00000520889 F5H768 121 aa4.47□□□□□ -1.69
IGHV4-55-201ENST00000520889 IGHV3-53P01767 116 aa4.47□□□□□ -1.69
IGHV4-55-201ENST00000520889 APOC3P02656 99 aa4.47□□□□□ -1.69
IGHV4-55-201ENST00000520889 SMIM17P0DL12 118 aa4.47□□□□□ -1.69
IGHV4-55-201ENST00000520889 GZMBP10144 247 aa4.47□□□□□ -1.69
IGHV4-55-201ENST00000520889 GATA1P15976 413 aaPredicted RBP4.47□□□□□ -1.69
IGHV4-55-201ENST00000520889 HOXA5P20719 270 aa4.47□□□□□ -1.69
IGHV4-55-201ENST00000520889 CRYBA4P53673 196 aa4.47□□□□□ -1.69
IGHV4-55-201ENST00000520889 RAB4BP61018 213 aa4.47□□□□□ -1.69
IGHV4-55-201ENST00000520889 RHOHQ15669 191 aa4.47□□□□□ -1.69
IGHV4-55-201ENST00000520889 COX19Q49B96 90 aa4.47□□□□□ -1.69
IGHV4-55-201ENST00000520889 CASC10Q5T4H9 136 aa4.47□□□□□ -1.69
IGHV4-55-201ENST00000520889 KCNIP4Q6PIL6 250 aa4.47□□□□□ -1.69
IGHV4-55-201ENST00000520889 SMIM15Q7Z3B0 74 aa4.47□□□□□ -1.69
IGHV4-55-201ENST00000520889 GATD1Q8NB37 220 aa4.47□□□□□ -1.69
IGHV4-55-201ENST00000520889 ZNF479Q96JC4 524 aa4.47□□□□□ -1.69
IGHV4-55-201ENST00000520889 TMEM191AQ9H0A3 160 aa4.47□□□□□ -1.69
IGHV4-55-201ENST00000520889 DPH3P1Q9H4G8 78 aa4.47□□□□□ -1.69
IGHV4-55-201ENST00000520889 HHLA3Q9XRX5 114 aa4.47□□□□□ -1.69
IGHV4-55-201ENST00000520889 TRAV26-1A0A087WT03 109 aa4.46□□□□□ -1.7
IGHV4-55-201ENST00000520889 H7C1H1 209 aa4.46□□□□□ -1.7
IGHV4-55-201ENST00000520889 TIRAPP58753 221 aa4.46□□□□□ -1.7
IGHV4-55-201ENST00000520889 LINC00315P59091 139 aa4.46□□□□□ -1.7
IGHV4-55-201ENST00000520889 TWIST1Q15672 202 aa4.46□□□□□ -1.7
IGHV4-55-201ENST00000520889 SLC7A5P1Q8MH63 180 aa4.46□□□□□ -1.7
IGHV4-55-201ENST00000520889 PGLYRP4Q96LB8 373 aa4.46□□□□□ -1.7
IGHV4-55-201ENST00000520889 PRADC1Q9BSG0 188 aa4.46□□□□□ -1.7
IGHV4-55-201ENST00000520889 TPPP3Q9BW30 176 aa4.46□□□□□ -1.7
IGHV4-55-201ENST00000520889 APLNQ9ULZ1 77 aa4.46□□□□□ -1.7
IGHV4-55-201ENST00000520889 A0A1B0GXF2 115 aa4.45□□□□□ -1.7
IGHV4-55-201ENST00000520889 K7EQD1 137 aa4.45□□□□□ -1.7
IGHV4-55-201ENST00000520889 PAX4O43316 350 aa4.45□□□□□ -1.7
IGHV4-55-201ENST00000520889 S100PP25815 95 aa4.45□□□□□ -1.7
IGHV4-55-201ENST00000520889 FAM3BP58499 235 aaPredicted RBP4.45□□□□□ -1.7
IGHV4-55-201ENST00000520889 HBBP68871 147 aa4.45□□□□□ -1.7
IGHV4-55-201ENST00000520889 MRPL23Q16540 153 aaKnown RBP4.45□□□□□ -1.7
IGHV4-55-201ENST00000520889 TMEM88Q6PEY1 159 aa4.45□□□□□ -1.7
IGHV4-55-201ENST00000520889 C14orf178Q8N769 122 aaPredicted RBP4.45□□□□□ -1.7
IGHV4-55-201ENST00000520889 SLC25A29Q8N8R3 303 aa4.45□□□□□ -1.7
IGHV4-55-201ENST00000520889 VSIG2Q96IQ7 327 aa4.45□□□□□ -1.7
IGHV4-55-201ENST00000520889 DNAJC30Q96LL9 226 aa4.45□□□□□ -1.7
IGHV4-55-201ENST00000520889 SAMD10Q9BYL1 202 aa4.45□□□□□ -1.7
IGHV4-55-201ENST00000520889 MSRB1Q9NZV6 116 aa4.45□□□□□ -1.7
IGHV4-55-201ENST00000520889 ICOSQ9Y6W8 199 aa4.45□□□□□ -1.7
IGHV4-55-201ENST00000520889 IGLL5B9A064 214 aa4.44□□□□□ -1.7
IGHV4-55-201ENST00000520889 PPP1R17O96001 155 aa4.44□□□□□ -1.7
IGHV4-55-201ENST00000520889 LINC00694P0DN24 101 aa4.44□□□□□ -1.7
IGHV4-55-201ENST00000520889 HTN3P15516 51 aa4.44□□□□□ -1.7
IGHV4-55-201ENST00000520889 EVI2AP22794 236 aa4.44□□□□□ -1.7
IGHV4-55-201ENST00000520889 FAM74A4Q5TZK3 123 aa4.44□□□□□ -1.7
IGHV4-55-201ENST00000520889 MRAP2Q96G30 205 aa4.44□□□□□ -1.7
IGHV4-55-201ENST00000520889 JPT2Q9H910 190 aa4.44□□□□□ -1.7
IGHV4-55-201ENST00000520889 RPS10P5Q9NQ39 176 aa4.44□□□□□ -1.7
IGHV4-55-201ENST00000520889 TRBV24-1A0A075B6N3 115 aa4.43□□□□□ -1.7
IGHV4-55-201ENST00000520889 A0A087WWL8 130 aa4.43□□□□□ -1.7
IGHV4-55-201ENST00000520889 A0A096LPF7 62 aa4.43□□□□□ -1.7
IGHV4-55-201ENST00000520889 MUC21A0A0G2JKD1 596 aa4.43□□□□□ -1.7
IGHV4-55-201ENST00000520889 MUC21A0A140T8X8 626 aa4.43□□□□□ -1.7
IGHV4-55-201ENST00000520889 M0QY20 66 aa4.43□□□□□ -1.7
IGHV4-55-201ENST00000520889 PHOX2AO14813 284 aa4.43□□□□□ -1.7
IGHV4-55-201ENST00000520889 PPBPP02775 128 aa4.43□□□□□ -1.7
IGHV4-55-201ENST00000520889 MT-ND6P03923 174 aa4.43□□□□□ -1.7
IGHV4-55-201ENST00000520889 P0DMU3 169 aa4.43□□□□□ -1.7
IGHV4-55-201ENST00000520889 FAM231AP0DMU4 169 aa4.43□□□□□ -1.7
IGHV4-55-201ENST00000520889 FAM231CP0DMU5 169 aa4.43□□□□□ -1.7
IGHV4-55-201ENST00000520889 RAB4AP20338 218 aa4.43□□□□□ -1.7
IGHV4-55-201ENST00000520889 S100A1P23297 94 aa4.43□□□□□ -1.7
IGHV4-55-201ENST00000520889 SRIP30626 198 aa4.43□□□□□ -1.7
IGHV4-55-201ENST00000520889 RPL36AP83881 106 aaKnown RBP4.43□□□□□ -1.7
IGHV4-55-201ENST00000520889 ZNF56Q15929 161 aa4.43□□□□□ -1.7
IGHV4-55-201ENST00000520889 TMEM97Q5BJF2 176 aa4.43□□□□□ -1.7
IGHV4-55-201ENST00000520889 FAM104BQ5XKR9 115 aa4.43□□□□□ -1.7
IGHV4-55-201ENST00000520889 LGALS9CQ6DKI2 356 aa4.43□□□□□ -1.7
IGHV4-55-201ENST00000520889 ZFAND6Q6FIF0 208 aa4.43□□□□□ -1.7
IGHV4-55-201ENST00000520889 NEGR1Q7Z3B1 354 aa4.43□□□□□ -1.7
IGHV4-55-201ENST00000520889 RPL36ALQ969Q0 106 aaKnown RBP4.43□□□□□ -1.7
IGHV4-55-201ENST00000520889 NIT2Q9NQR4 276 aa4.43□□□□□ -1.7
IGHV4-55-201ENST00000520889 TRBV7-3A0A075B6L6 115 aa4.42□□□□□ -1.7
IGHV4-55-201ENST00000520889 A0A0J9YY99 117 aa4.42□□□□□ -1.7
IGHV4-55-201ENST00000520889 TRBV6-5A0A0K0K1A5 114 aa4.42□□□□□ -1.7
IGHV4-55-201ENST00000520889 F5H697 171 aa4.42□□□□□ -1.7
IGHV4-55-201ENST00000520889 HLA-DQA1P01909 254 aa4.42□□□□□ -1.7
IGHV4-55-201ENST00000520889 GYPEP15421 78 aa4.42□□□□□ -1.7
IGHV4-55-201ENST00000520889 CCL18P55774 89 aa4.42□□□□□ -1.7
IGHV4-55-201ENST00000520889 UBE2D3P61077 147 aa4.42□□□□□ -1.7
IGHV4-55-201ENST00000520889 UBE2D2P62837 147 aa4.42□□□□□ -1.7
IGHV4-55-201ENST00000520889 SUMO4Q6EEV6 95 aa4.42□□□□□ -1.7
IGHV4-55-201ENST00000520889 Q6ZSN1 163 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms