RNA–Protein interactions for RNA: ENST00000520002.5

CSMD1-206, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-206ENST00000520002 HIGD1BQ9P298 99 aa6.86□□□□□ -1.31
CSMD1-206ENST00000520002 ANKRD17O75179 2603 aaKnown RBP6.86□□□□□ -1.31
CSMD1-206ENST00000520002 RAI1Q7Z5J4 1906 aaPredicted RBP6.86□□□□□ -1.31
CSMD1-206ENST00000520002 NDUFA7O95182 113 aa6.86□□□□□ -1.31
CSMD1-206ENST00000520002 FAM110DQ8TAY7 271 aaPredicted RBP6.86□□□□□ -1.31
CSMD1-206ENST00000520002 TPSG1Q9NRR2 321 aa6.86□□□□□ -1.31
CSMD1-206ENST00000520002 PYGO2Q9BRQ0 406 aa6.86□□□□□ -1.31
CSMD1-206ENST00000520002 HRCT1Q6UXD1 115 aa6.86□□□□□ -1.31
CSMD1-206ENST00000520002 LINC01619G3V211 115 aa6.86□□□□□ -1.31
CSMD1-206ENST00000520002 MSMBP08118 114 aa6.86□□□□□ -1.31
CSMD1-206ENST00000520002 TMEM61Q8N0U2 210 aa6.86□□□□□ -1.31
CSMD1-206ENST00000520002 Q8N1Y9 231 aa6.86□□□□□ -1.31
CSMD1-206ENST00000520002 C14orf132Q9NPU4 83 aa6.86□□□□□ -1.31
CSMD1-206ENST00000520002 LGALS9O00182 355 aa6.86□□□□□ -1.31
CSMD1-206ENST00000520002 LINC00694P0DN24 101 aa6.86□□□□□ -1.31
CSMD1-206ENST00000520002 TRBV10-2A0A0K0K1G8 114 aa6.85□□□□□ -1.31
CSMD1-206ENST00000520002 UBE2E1P51965 193 aa6.85□□□□□ -1.31
CSMD1-206ENST00000520002 WISP1O95388 367 aa6.85□□□□□ -1.31
CSMD1-206ENST00000520002 ZFP2Q6ZN57 461 aa6.85□□□□□ -1.31
CSMD1-206ENST00000520002 POLQO75417 2590 aa6.85□□□□□ -1.31
CSMD1-206ENST00000520002 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.85□□□□□ -1.31
CSMD1-206ENST00000520002 ZNF134P52741 427 aa6.85□□□□□ -1.31
CSMD1-206ENST00000520002 WT1-ASQ06250 92 aa6.85□□□□□ -1.31
CSMD1-206ENST00000520002 Q8TCH9 128 aa6.85□□□□□ -1.31
CSMD1-206ENST00000520002 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.85□□□□□ -1.31
CSMD1-206ENST00000520002 IGKV2-29A2NJV5 120 aaPredicted RBP6.85□□□□□ -1.31
CSMD1-206ENST00000520002 C20orf197Q8N268 126 aa6.85□□□□□ -1.31
CSMD1-206ENST00000520002 C17orf77Q96MU5 243 aa6.85□□□□□ -1.31
CSMD1-206ENST00000520002 USP24Q9UPU5 2620 aa6.84□□□□□ -1.31
CSMD1-206ENST00000520002 CFPP27918 469 aa6.84□□□□□ -1.31
CSMD1-206ENST00000520002 TRAV4A0A0B4J268 109 aa6.84□□□□□ -1.31
CSMD1-206ENST00000520002 FAM240AA0A1B0GVK7 77 aa6.84□□□□□ -1.31
CSMD1-206ENST00000520002 PRR25Q96S07 402 aa6.84□□□□□ -1.31
CSMD1-206ENST00000520002 IGHV1-69DA0A0B4J2H0 117 aa6.84□□□□□ -1.31
CSMD1-206ENST00000520002 IGHV1-69P01742 117 aa6.84□□□□□ -1.31
CSMD1-206ENST00000520002 C17orf58Q2M2W7 97 aa6.84□□□□□ -1.31
CSMD1-206ENST00000520002 CHKB-CPT1BH3BT56 60 aa6.84□□□□□ -1.31
CSMD1-206ENST00000520002 Q71RC1 249 aaPredicted RBP6.84□□□□□ -1.31
CSMD1-206ENST00000520002 DYNAPQ8N1N2 210 aa6.84□□□□□ -1.31
CSMD1-206ENST00000520002 NDUFC2-KCTD14E9PQ53 114 aa6.84□□□□□ -1.31
CSMD1-206ENST00000520002 FOXL2NBQ6ZUU3 175 aa6.84□□□□□ -1.31
CSMD1-206ENST00000520002 UPK3BQ9BT76 320 aa6.84□□□□□ -1.31
CSMD1-206ENST00000520002 UQCRQO14949 82 aa6.84□□□□□ -1.31
CSMD1-206ENST00000520002 FUSP35637 526 aaKnown RBP eCLIP6.84□□□□□ -1.31
CSMD1-206ENST00000520002 A0A096LPF7 62 aa6.83□□□□□ -1.32
CSMD1-206ENST00000520002 H3BRN7 92 aa6.83□□□□□ -1.32
CSMD1-206ENST00000520002 Q6ZS92 163 aa6.83□□□□□ -1.32
CSMD1-206ENST00000520002 Q9HAA7 133 aa6.83□□□□□ -1.32
CSMD1-206ENST00000520002 ZNRF2Q8NHG8 242 aa6.83□□□□□ -1.32
CSMD1-206ENST00000520002 IGFBPL1Q8WX77 278 aa6.83□□□□□ -1.32
CSMD1-206ENST00000520002 CGB3P0DN86 165 aa6.83□□□□□ -1.32
CSMD1-206ENST00000520002 TMEM14CQ9P0S9 112 aa6.83□□□□□ -1.32
CSMD1-206ENST00000520002 SLC25A29Q8N8R3 303 aa6.83□□□□□ -1.32
CSMD1-206ENST00000520002 FOXE3Q13461 319 aa6.83□□□□□ -1.32
CSMD1-206ENST00000520002 MP68P56378 58 aa6.82□□□□□ -1.32
CSMD1-206ENST00000520002 C1orf147Q96MC9 270 aaPredicted RBP6.82□□□□□ -1.32
CSMD1-206ENST00000520002 IGF2BP2-AS1Q96M15 143 aa6.82□□□□□ -1.32
CSMD1-206ENST00000520002 NDUFA4O00483 81 aa6.82□□□□□ -1.32
CSMD1-206ENST00000520002 XCL1P47992 114 aa6.82□□□□□ -1.32
CSMD1-206ENST00000520002 ANGP03950 147 aaKnown RBP6.82□□□□□ -1.32
CSMD1-206ENST00000520002 IL15RAQ13261 267 aa6.82□□□□□ -1.32
CSMD1-206ENST00000520002 C8orf31Q8N9H6 132 aa6.82□□□□□ -1.32
CSMD1-206ENST00000520002 CPAMD8Q8IZJ3 1885 aa6.82□□□□□ -1.32
CSMD1-206ENST00000520002 GATA3P23771 443 aa6.81□□□□□ -1.32
CSMD1-206ENST00000520002 LOXP28300 417 aaPredicted RBP6.81□□□□□ -1.32
CSMD1-206ENST00000520002 CGB7P0DN87 165 aa6.81□□□□□ -1.32
CSMD1-206ENST00000520002 LMO1P25800 156 aa6.81□□□□□ -1.32
CSMD1-206ENST00000520002 GTSF1Q8WW33 167 aa6.81□□□□□ -1.32
CSMD1-206ENST00000520002 MSRB1Q9NZV6 116 aa6.81□□□□□ -1.32
CSMD1-206ENST00000520002 C15orf65H3BRN8 121 aa6.81□□□□□ -1.32
CSMD1-206ENST00000520002 IGHV7-4-1A0A0J9YVY3 117 aa6.81□□□□□ -1.32
CSMD1-206ENST00000520002 GNRH2O43555 120 aa6.81□□□□□ -1.32
CSMD1-206ENST00000520002 ATP5G1P05496 136 aa6.81□□□□□ -1.32
CSMD1-206ENST00000520002 Q96MF0 132 aa6.81□□□□□ -1.32
CSMD1-206ENST00000520002 ZNF503-AS2A6NEH8 195 aa6.81□□□□□ -1.32
CSMD1-206ENST00000520002 ODF1Q14990 250 aa6.81□□□□□ -1.32
CSMD1-206ENST00000520002 LINC00643Q86TS7 51 aa6.81□□□□□ -1.32
CSMD1-206ENST00000520002 NDUFA11Q86Y39 141 aa6.81□□□□□ -1.32
CSMD1-206ENST00000520002 CENPVL3A0A0U1RRI6 287 aa6.81□□□□□ -1.32
CSMD1-206ENST00000520002 RHOHQ15669 191 aa6.81□□□□□ -1.32
CSMD1-206ENST00000520002 SNURFQ9Y675 71 aa6.8□□□□□ -1.32
CSMD1-206ENST00000520002 PLA2G5P39877 138 aa6.8□□□□□ -1.32
CSMD1-206ENST00000520002 DIAPH2-AS1Q14236 149 aa6.8□□□□□ -1.32
CSMD1-206ENST00000520002 APOC4P55056 127 aa6.8□□□□□ -1.32
CSMD1-206ENST00000520002 RETNQ9HD89 108 aa6.8□□□□□ -1.32
CSMD1-206ENST00000520002 IGLV3-9A0A075B6K5 115 aa6.8□□□□□ -1.32
CSMD1-206ENST00000520002 RPL39P62891 51 aaKnown RBP6.8□□□□□ -1.32
CSMD1-206ENST00000520002 NOP10Q9NPE3 64 aaKnown RBP6.8□□□□□ -1.32
CSMD1-206ENST00000520002 E9PLD3 99 aa6.8□□□□□ -1.32
CSMD1-206ENST00000520002 SMIM9A6NGZ8 99 aa6.79□□□□□ -1.32
CSMD1-206ENST00000520002 TRBV12-3P01733 135 aa6.79□□□□□ -1.32
CSMD1-206ENST00000520002 VSIG2Q96IQ7 327 aa6.79□□□□□ -1.32
CSMD1-206ENST00000520002 ADAMTS20P59510 1910 aa6.79□□□□□ -1.32
CSMD1-206ENST00000520002 DEFB136Q30KP8 78 aa6.79□□□□□ -1.32
CSMD1-206ENST00000520002 CSDC2Q9Y534 153 aaKnown RBP6.79□□□□□ -1.32
CSMD1-206ENST00000520002 NCR3O14931 201 aa6.79□□□□□ -1.32
CSMD1-206ENST00000520002 LECT2O14960 151 aa6.79□□□□□ -1.32
CSMD1-206ENST00000520002 BUB3O43684 328 aa6.79□□□□□ -1.32
CSMD1-206ENST00000520002 FASNP49327 2511 aaKnown RBP6.79□□□□□ -1.32
CSMD1-206ENST00000520002 SND1-IT1Q9HBX3 110 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms