RNA–Protein interactions for RNA: ENST00000519485.1

CSMD3-209, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 3

Gene CSMD3, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-209ENST00000519485 CCL4P13236 92 aa2.61□□□□□ -1.99
CSMD3-209ENST00000519485 S100A4P26447 101 aaKnown RBP2.61□□□□□ -1.99
CSMD3-209ENST00000519485 INSL3P51460 131 aa2.61□□□□□ -1.99
CSMD3-209ENST00000519485 EMP1P54849 157 aa2.61□□□□□ -1.99
CSMD3-209ENST00000519485 ESPL1Q14674 2120 aa2.61□□□□□ -1.99
CSMD3-209ENST00000519485 FAM159AQ6UWV7 190 aa2.61□□□□□ -1.99
CSMD3-209ENST00000519485 C2orf66Q6UXQ4 117 aa2.61□□□□□ -1.99
CSMD3-209ENST00000519485 MRAPQ8TCY5 172 aa2.61□□□□□ -1.99
CSMD3-209ENST00000519485 LINC00526Q96FQ7 95 aa2.61□□□□□ -1.99
CSMD3-209ENST00000519485 CARD19Q96LW7 228 aa2.61□□□□□ -1.99
CSMD3-209ENST00000519485 CCL13Q99616 98 aa2.61□□□□□ -1.99
CSMD3-209ENST00000519485 C21orf62Q9NYP8 219 aa2.61□□□□□ -1.99
CSMD3-209ENST00000519485 SLC25A15Q9Y619 301 aa2.61□□□□□ -1.99
CSMD3-209ENST00000519485 U3KQA8 63 aa2.61□□□□□ -1.99
CSMD3-209ENST00000519485 TET2Q6N021 2002 aaPredicted RBP2.61□□□□□ -1.99
CSMD3-209ENST00000519485 RAI1Q7Z5J4 1906 aaPredicted RBP2.6□□□□□ -1.99
CSMD3-209ENST00000519485 TRAV4A0A0B4J268 109 aa2.6□□□□□ -1.99
CSMD3-209ENST00000519485 IGHV1-3A0A0C4DH29 117 aa2.6□□□□□ -1.99
CSMD3-209ENST00000519485 NDUFC2-KCTD14E9PQ53 114 aa2.6□□□□□ -1.99
CSMD3-209ENST00000519485 SMKR1H3BMG3 65 aa2.6□□□□□ -1.99
CSMD3-209ENST00000519485 BUB1B-PAK6H3BSN5 160 aa2.6□□□□□ -1.99
CSMD3-209ENST00000519485 J3QQQ9 107 aa2.6□□□□□ -1.99
CSMD3-209ENST00000519485 CDX4O14627 284 aaPredicted RBP2.6□□□□□ -1.99
CSMD3-209ENST00000519485 MRPS12O15235 138 aaKnown RBP2.6□□□□□ -1.99
CSMD3-209ENST00000519485 TIMM17BO60830 172 aa2.6□□□□□ -1.99
CSMD3-209ENST00000519485 NDUFA7O95182 113 aa2.6□□□□□ -1.99
CSMD3-209ENST00000519485 IGHV1-46P01743 117 aa2.6□□□□□ -1.99
CSMD3-209ENST00000519485 IGHV3-33P01772 117 aa2.6□□□□□ -1.99
CSMD3-209ENST00000519485 TRACP01848 142 aa2.6□□□□□ -1.99
CSMD3-209ENST00000519485 COX6B1P14854 86 aa2.6□□□□□ -1.99
CSMD3-209ENST00000519485 TMEM258P61165 79 aa2.6□□□□□ -1.99
CSMD3-209ENST00000519485 RHOHQ15669 191 aa2.6□□□□□ -1.99
CSMD3-209ENST00000519485 ZNF56Q15929 161 aa2.6□□□□□ -1.99
CSMD3-209ENST00000519485 TMEM155Q4W5P6 130 aa2.6□□□□□ -1.99
CSMD3-209ENST00000519485 SPRNQ5BIV9 151 aa2.6□□□□□ -1.99
CSMD3-209ENST00000519485 S100A7L2Q5SY68 101 aa2.6□□□□□ -1.99
CSMD3-209ENST00000519485 ZFP2Q6ZN57 461 aa2.6□□□□□ -1.99
CSMD3-209ENST00000519485 RNF182Q8N6D2 247 aa2.6□□□□□ -1.99
CSMD3-209ENST00000519485 DEFB108BQ8NET1 73 aa2.6□□□□□ -1.99
CSMD3-209ENST00000519485 NPBQ8NG41 125 aa2.6□□□□□ -1.99
CSMD3-209ENST00000519485 BAALCQ8WXS3 180 aa2.6□□□□□ -1.99
CSMD3-209ENST00000519485 METTL26Q96S19 204 aa2.6□□□□□ -1.99
CSMD3-209ENST00000519485 VPREB3Q9UKI3 123 aa2.6□□□□□ -1.99
CSMD3-209ENST00000519485 MOB4Q9Y3A3 225 aa2.6□□□□□ -1.99
CSMD3-209ENST00000519485 PHLDA3Q9Y5J5 127 aa2.6□□□□□ -1.99
CSMD3-209ENST00000519485 SELENOKQ9Y6D0 94 aa2.6□□□□□ -1.99
CSMD3-209ENST00000519485 DYSFO75923 2080 aa2.6□□□□□ -1.99
CSMD3-209ENST00000519485 F5P12259 2224 aa2.59□□□□□ -1.99
CSMD3-209ENST00000519485 IGKV2-40A0A087WW87 121 aaPredicted RBP2.59□□□□□ -1.99
CSMD3-209ENST00000519485 TRBV7-1A0A0A6YYK4 115 aa2.59□□□□□ -1.99
CSMD3-209ENST00000519485 TRAV25A0A0B4J276 109 aa2.59□□□□□ -1.99
CSMD3-209ENST00000519485 E7EUB6 86 aa2.59□□□□□ -1.99
CSMD3-209ENST00000519485 H3BTX0 84 aa2.59□□□□□ -1.99
CSMD3-209ENST00000519485 CCDC179H3BU77 68 aa2.59□□□□□ -1.99
CSMD3-209ENST00000519485 K7EIM0 57 aa2.59□□□□□ -1.99
CSMD3-209ENST00000519485 NPFFO15130 113 aa2.59□□□□□ -1.99
CSMD3-209ENST00000519485 NBR2O15453 112 aa2.59□□□□□ -1.99
CSMD3-209ENST00000519485 IGKV2D-40P01614 121 aaPredicted RBP2.59□□□□□ -1.99
CSMD3-209ENST00000519485 IGHV3-48P01763 117 aa2.59□□□□□ -1.99
CSMD3-209ENST00000519485 CRYGAP11844 174 aa2.59□□□□□ -1.99
CSMD3-209ENST00000519485 FXYD7P58549 80 aa2.59□□□□□ -1.99
CSMD3-209ENST00000519485 ZNF415Q09FC8 603 aa2.59□□□□□ -1.99
CSMD3-209ENST00000519485 C10orf55Q5SWW7 151 aa2.59□□□□□ -1.99
CSMD3-209ENST00000519485 HES3Q5TGS1 186 aa2.59□□□□□ -1.99
CSMD3-209ENST00000519485 FAM216BQ8N7L0 139 aa2.59□□□□□ -1.99
CSMD3-209ENST00000519485 POM121L12Q8N7R1 296 aa2.59□□□□□ -1.99
CSMD3-209ENST00000519485 ZNRF2Q8NHG8 242 aa2.59□□□□□ -1.99
CSMD3-209ENST00000519485 TMEM263Q8WUH6 116 aaKnown RBP2.59□□□□□ -1.99
CSMD3-209ENST00000519485 RASL10AQ92737 203 aa2.59□□□□□ -1.99
CSMD3-209ENST00000519485 PPDPFQ9H3Y8 114 aa2.59□□□□□ -1.99
CSMD3-209ENST00000519485 MRPL36Q9P0J6 103 aaKnown RBP2.59□□□□□ -1.99
CSMD3-209ENST00000519485 DPM3Q9P2X0 92 aa2.59□□□□□ -1.99
CSMD3-209ENST00000519485 SPRR3Q9UBC9 169 aa2.59□□□□□ -1.99
CSMD3-209ENST00000519485 RTTNQ86VV8 2226 aa2.58□□□□□ -2
CSMD3-209ENST00000519485 ZNF407Q9C0G0 2248 aa2.58□□□□□ -2
CSMD3-209ENST00000519485 IGLV11-55A0A075B6I3 123 aa2.58□□□□□ -2
CSMD3-209ENST00000519485 TRBV6-5A0A0K0K1A5 114 aa2.58□□□□□ -2
CSMD3-209ENST00000519485 A4D1N5 150 aa2.58□□□□□ -2
CSMD3-209ENST00000519485 SMIM9A6NGZ8 99 aa2.58□□□□□ -2
CSMD3-209ENST00000519485 IGLV1-47P01700 117 aa2.58□□□□□ -2
CSMD3-209ENST00000519485 TFF1P04155 84 aa2.58□□□□□ -2
CSMD3-209ENST00000519485 IGHV4-31P0DP07 118 aa2.58□□□□□ -2
CSMD3-209ENST00000519485 COX7CP15954 63 aa2.58□□□□□ -2
CSMD3-209ENST00000519485 EFNA4P52798 201 aa2.58□□□□□ -2
CSMD3-209ENST00000519485 CCL8P80075 99 aa2.58□□□□□ -2
CSMD3-209ENST00000519485 MRPS36P82909 103 aaKnown RBP2.58□□□□□ -2
CSMD3-209ENST00000519485 EBI3Q14213 229 aa2.58□□□□□ -2
CSMD3-209ENST00000519485 DIAPH2-AS1Q14236 149 aa2.58□□□□□ -2
CSMD3-209ENST00000519485 MINOS1Q5TGZ0 78 aa2.58□□□□□ -2
CSMD3-209ENST00000519485 DUX4L9Q6RFH8 374 aaPredicted RBP2.58□□□□□ -2
CSMD3-209ENST00000519485 DAND5Q8N907 189 aa2.58□□□□□ -2
CSMD3-209ENST00000519485 EEF1AKMT3Q96AZ1 226 aa2.58□□□□□ -2
CSMD3-209ENST00000519485 ODF3Q96PU9 254 aa2.58□□□□□ -2
CSMD3-209ENST00000519485 TTTY13Q9BZ97 58 aa2.58□□□□□ -2
CSMD3-209ENST00000519485 CSDC2Q9Y534 153 aaKnown RBP2.58□□□□□ -2
CSMD3-209ENST00000519485 ICOSQ9Y6W8 199 aa2.58□□□□□ -2
CSMD3-209ENST00000519485 MINOS1-NBL1R4GNA1 71 aa2.58□□□□□ -2
CSMD3-209ENST00000519485 CACNA1DQ01668 2161 aa2.58□□□□□ -2
CSMD3-209ENST00000519485 DIDO1Q9BTC0 2240 aaKnown RBP2.58□□□□□ -2
CSMD3-209ENST00000519485 PCNTO95613 3336 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms