RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 CRYGDP07320 174 aa15.14■□□□□ 0.01
VEGFA-217ENST00000518538 PEA15Q15121 130 aa15.14■□□□□ 0.01
VEGFA-217ENST00000518538 RPP21Q9H633 154 aaKnown RBP15.14■□□□□ 0.01
VEGFA-217ENST00000518538 Q9H8V8 135 aa15.14■□□□□ 0.01
VEGFA-217ENST00000518538 MUC21A0A0G2JKD1 596 aa15.13■□□□□ 0.01
VEGFA-217ENST00000518538 MUC21A0A140T8X8 626 aa15.13■□□□□ 0.01
VEGFA-217ENST00000518538 TPPP3Q9BW30 176 aa15.13■□□□□ 0.01
VEGFA-217ENST00000518538 SMDT1Q9H4I9 107 aa15.13■□□□□ 0.01
VEGFA-217ENST00000518538 FAM231DQ6ZW35 169 aa15.12■□□□□ 0.01
VEGFA-217ENST00000518538 LINC01551Q86U37 167 aa15.12■□□□□ 0.01
VEGFA-217ENST00000518538 NBDYA0A0U1RRE5 68 aa15.11■□□□□ 0.01
VEGFA-217ENST00000518538 A0A1W2PPQ1 181 aa15.11■□□□□ 0.01
VEGFA-217ENST00000518538 C9JQL5 133 aa15.11■□□□□ 0.01
VEGFA-217ENST00000518538 F2Z2F3 143 aa15.11■□□□□ 0.01
VEGFA-217ENST00000518538 SRSF3P84103 164 aaKnown RBP15.11■□□□□ 0.01
VEGFA-217ENST00000518538 RAB14P61106 215 aa15.1■□□□□ 0.01
VEGFA-217ENST00000518538 SSTP61278 116 aa15.1■□□□□ 0.01
VEGFA-217ENST00000518538 CACNG7P62955 275 aa15.1■□□□□ 0.01
VEGFA-217ENST00000518538 FAM74A3Q4VXF1 159 aa15.1■□□□□ 0.01
VEGFA-217ENST00000518538 C14orf178Q8N769 122 aaPredicted RBP15.1■□□□□ 0.01
VEGFA-217ENST00000518538 TIRAPP58753 221 aa15.09■□□□□ 0.01
VEGFA-217ENST00000518538 AP1S3Q96PC3 154 aa15.09■□□□□ 0.01
VEGFA-217ENST00000518538 DNAH6Q9C0G6 4158 aa15.09■□□□□ 0.01
VEGFA-217ENST00000518538 GATCO43716 136 aaKnown RBP15.08■□□□□ 0
VEGFA-217ENST00000518538 CTRLP40313 264 aa15.08■□□□□ 0
VEGFA-217ENST00000518538 ERVFC1-1P60608 527 aa15.08■□□□□ 0
VEGFA-217ENST00000518538 LYZL1Q6UWQ5 148 aa15.08■□□□□ 0
VEGFA-217ENST00000518538 SIVA1O15304 175 aa15.07■□□□□ 0
VEGFA-217ENST00000518538 LINC00694P0DN24 101 aa15.07■□□□□ 0
VEGFA-217ENST00000518538 RAB4BP61018 213 aa15.07■□□□□ 0
VEGFA-217ENST00000518538 TMEM241Q24JQ0 296 aa15.07■□□□□ 0
VEGFA-217ENST00000518538 TTC32Q5I0X7 151 aa15.07■□□□□ 0
VEGFA-217ENST00000518538 GAGE12JA6NER3 117 aa15.06■□□□□ 0
VEGFA-217ENST00000518538 GAGE1Q13065 139 aa15.06■□□□□ 0
VEGFA-217ENST00000518538 GAGE4Q13068 117 aa15.06■□□□□ 0
VEGFA-217ENST00000518538 GAGE5Q13069 117 aa15.06■□□□□ 0
VEGFA-217ENST00000518538 ZNF56Q15929 161 aa15.06■□□□□ 0
VEGFA-217ENST00000518538 GAGE13Q4V321 117 aa15.06■□□□□ 0
VEGFA-217ENST00000518538 CT83Q5H943 113 aa15.06■□□□□ 0
VEGFA-217ENST00000518538 WDR73Q6P4I2 378 aa15.06■□□□□ 0
VEGFA-217ENST00000518538 ATP6V0E2Q8NHE4 81 aa15.06■□□□□ 0
VEGFA-217ENST00000518538 Q9UF83 564 aa15.06■□□□□ 0
VEGFA-217ENST00000518538 TRBV10-1A0A0K0K1A3 114 aa15.05■□□□□ -0
VEGFA-217ENST00000518538 A8MWL6 223 aa15.05■□□□□ -0
VEGFA-217ENST00000518538 SMIM17P0DL12 118 aa15.05■□□□□ -0
VEGFA-217ENST00000518538 CNFNQ9BYD5 112 aa15.05■□□□□ -0
VEGFA-217ENST00000518538 MSRB1Q9NZV6 116 aa15.05■□□□□ -0
VEGFA-217ENST00000518538 KIF25-AS1Q9Y6Z4 181 aa15.05■□□□□ -0
VEGFA-217ENST00000518538 IFITM2Q01629 132 aa15.04■□□□□ -0
VEGFA-217ENST00000518538 CLLU1Q5K131 121 aa15.04■□□□□ -0
VEGFA-217ENST00000518538 C1orf134Q5TEV5 83 aa15.04■□□□□ -0
VEGFA-217ENST00000518538 GTSF1Q8WW33 167 aa15.04■□□□□ -0
VEGFA-217ENST00000518538 GTSF1LQ9H1H1 148 aa15.04■□□□□ -0
VEGFA-217ENST00000518538 OSTCQ9NRP0 149 aa15.04■□□□□ -0
VEGFA-217ENST00000518538 NAT8Q9UHE5 227 aa15.04■□□□□ -0
VEGFA-217ENST00000518538 TRGC1P0CF51 173 aa15.03■□□□□ -0
VEGFA-217ENST00000518538 NTF3P20783 257 aa15.03■□□□□ -0
VEGFA-217ENST00000518538 RPL23P62829 140 aaKnown RBP15.03■□□□□ -0
VEGFA-217ENST00000518538 SOHLH1Q5JUK2 328 aa15.03■□□□□ -0
VEGFA-217ENST00000518538 LINC00336Q6ZUF6 198 aa15.03■□□□□ -0
VEGFA-217ENST00000518538 ISOC2Q96AB3 205 aa15.03■□□□□ -0
VEGFA-217ENST00000518538 RTL8CO15255 209 aa15.02■□□□□ -0
VEGFA-217ENST00000518538 LINC00315P59091 139 aa15.02■□□□□ -0
VEGFA-217ENST00000518538 WFDC10BQ8IUB3 73 aa15.02■□□□□ -0
VEGFA-217ENST00000518538 KRTAP1-5Q9BYS1 174 aa15.02■□□□□ -0
VEGFA-217ENST00000518538 F5H697 171 aa15.01□□□□□ -0.01
VEGFA-217ENST00000518538 RPL36AP83881 106 aaKnown RBP15.01□□□□□ -0.01
VEGFA-217ENST00000518538 C15orf54Q8N8G6 183 aa15.01□□□□□ -0.01
VEGFA-217ENST00000518538 RPL36ALQ969Q0 106 aaKnown RBP15.01□□□□□ -0.01
VEGFA-217ENST00000518538 FOXA3P55318 350 aaPredicted RBP15□□□□□ -0.01
VEGFA-217ENST00000518538 ADIRFQ15847 76 aa15□□□□□ -0.01
VEGFA-217ENST00000518538 LELP1Q5T871 98 aa15□□□□□ -0.01
VEGFA-217ENST00000518538 C6orf223Q8N319 242 aa15□□□□□ -0.01
VEGFA-217ENST00000518538 OR10G8Q8NGN5 311 aa15□□□□□ -0.01
VEGFA-217ENST00000518538 TRBV7-3A0A075B6L6 115 aa14.99□□□□□ -0.01
VEGFA-217ENST00000518538 TRAV8-6A0A0B4J262 113 aa14.99□□□□□ -0.01
VEGFA-217ENST00000518538 EVI2AP22794 236 aa14.99□□□□□ -0.01
VEGFA-217ENST00000518538 TWIST1Q15672 202 aa14.99□□□□□ -0.01
VEGFA-217ENST00000518538 TSKUQ8WUA8 353 aa14.99□□□□□ -0.01
VEGFA-217ENST00000518538 GFRA4Q9GZZ7 299 aa14.99□□□□□ -0.01
VEGFA-217ENST00000518538 MGPP08493 103 aa14.98□□□□□ -0.01
VEGFA-217ENST00000518538 DNAH10OSP0CZ25 163 aa14.98□□□□□ -0.01
VEGFA-217ENST00000518538 BTF3P20290 206 aaKnown RBP14.98□□□□□ -0.01
VEGFA-217ENST00000518538 OR10J3Q5JRS4 329 aa14.98□□□□□ -0.01
VEGFA-217ENST00000518538 NEXN-AS1Q8NBZ9 246 aa14.98□□□□□ -0.01
VEGFA-217ENST00000518538 PGLYRP4Q96LB8 373 aa14.98□□□□□ -0.01
VEGFA-217ENST00000518538 DPH3P1Q9H4G8 78 aa14.98□□□□□ -0.01
VEGFA-217ENST00000518538 V9GYV3 84 aa14.98□□□□□ -0.01
VEGFA-217ENST00000518538 FAM231BA6NCW3 169 aa14.97□□□□□ -0.01
VEGFA-217ENST00000518538 K7EP13 123 aa14.97□□□□□ -0.01
VEGFA-217ENST00000518538 UBE2D3P61077 147 aa14.97□□□□□ -0.01
VEGFA-217ENST00000518538 UBE2D2P62837 147 aa14.97□□□□□ -0.01
VEGFA-217ENST00000518538 TRAV9-2A0A087WT02 112 aa14.96□□□□□ -0.01
VEGFA-217ENST00000518538 A0A087WWC5 75 aa14.96□□□□□ -0.01
VEGFA-217ENST00000518538 IGHV3-38A0A0C4DH36 116 aa14.96□□□□□ -0.01
VEGFA-217ENST00000518538 PRSS29PA6NIE9 313 aa14.95□□□□□ -0.02
VEGFA-217ENST00000518538 HIGD1CA8MV81 97 aa14.95□□□□□ -0.02
VEGFA-217ENST00000518538 H7C1H1 209 aa14.95□□□□□ -0.02
VEGFA-217ENST00000518538 BORCS7Q96B45 105 aa14.95□□□□□ -0.02
VEGFA-217ENST00000518538 M0QY20 66 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms