RNA–Protein interactions for RNA: ENST00000518293.5

PABPC1-206, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-206ENST00000518293 PRM2P04554 102 aa1.9□□□□□ -2.11
PABPC1-206ENST00000518293 IL5P05113 134 aa1.9□□□□□ -2.11
PABPC1-206ENST00000518293 NMBP08949 121 aa1.9□□□□□ -2.11
PABPC1-206ENST00000518293 OR5G3P0C626 314 aa1.9□□□□□ -2.11
PABPC1-206ENST00000518293 CXCL3P19876 107 aa1.9□□□□□ -2.11
PABPC1-206ENST00000518293 HLA-DMAP28067 261 aa1.9□□□□□ -2.11
PABPC1-206ENST00000518293 TCL1AP56279 114 aa1.9□□□□□ -2.11
PABPC1-206ENST00000518293 PIGPP57054 158 aa1.9□□□□□ -2.11
PABPC1-206ENST00000518293 POLR2GP62487 172 aaKnown RBP eCLIP1.9□□□□□ -2.11
PABPC1-206ENST00000518293 ZNF90Q03938 601 aa1.9□□□□□ -2.11
PABPC1-206ENST00000518293 SYCNQ0VAF6 134 aa1.9□□□□□ -2.11
PABPC1-206ENST00000518293 ZNF846Q147U1 533 aa1.9□□□□□ -2.11
PABPC1-206ENST00000518293 GUK1Q16774 197 aa1.9□□□□□ -2.11
PABPC1-206ENST00000518293 RNASE10Q5GAN6 216 aaKnown RBP1.9□□□□□ -2.11
PABPC1-206ENST00000518293 UBE2NLQ5JXB2 153 aa1.9□□□□□ -2.11
PABPC1-206ENST00000518293 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.9□□□□□ -2.11
PABPC1-206ENST00000518293 BPIFA4PQ86YQ2 179 aa1.9□□□□□ -2.11
PABPC1-206ENST00000518293 WFDC10BQ8IUB3 73 aa1.9□□□□□ -2.11
PABPC1-206ENST00000518293 TERB2Q8NHR7 220 aa1.9□□□□□ -2.11
PABPC1-206ENST00000518293 DTD1Q8TEA8 209 aa1.9□□□□□ -2.11
PABPC1-206ENST00000518293 C15orf40Q8WUR7 153 aa1.9□□□□□ -2.11
PABPC1-206ENST00000518293 YIPF6Q96EC8 236 aa1.9□□□□□ -2.11
PABPC1-206ENST00000518293 DPH3Q96FX2 82 aa1.9□□□□□ -2.11
PABPC1-206ENST00000518293 CIB3Q96Q77 187 aaPredicted RBP1.9□□□□□ -2.11
PABPC1-206ENST00000518293 ATP5SQ99766 215 aa1.9□□□□□ -2.11
PABPC1-206ENST00000518293 PRADC1Q9BSG0 188 aa1.9□□□□□ -2.11
PABPC1-206ENST00000518293 FXYD6Q9H0Q3 95 aa1.9□□□□□ -2.11
PABPC1-206ENST00000518293 DUSP21Q9H596 190 aa1.9□□□□□ -2.11
PABPC1-206ENST00000518293 NDUFB11Q9NX14 153 aa1.9□□□□□ -2.11
PABPC1-206ENST00000518293 PAIP2BQ9ULR5 123 aaKnown RBP1.9□□□□□ -2.11
PABPC1-206ENST00000518293 PSG8Q9UQ74 426 aa1.9□□□□□ -2.11
PABPC1-206ENST00000518293 HIGD1AQ9Y241 93 aa1.9□□□□□ -2.11
PABPC1-206ENST00000518293 C7orf71A4D174 169 aa1.89□□□□□ -2.11
PABPC1-206ENST00000518293 PGPA6NDG6 321 aa1.89□□□□□ -2.11
PABPC1-206ENST00000518293 PITX3O75364 302 aa1.89□□□□□ -2.11
PABPC1-206ENST00000518293 NDUFS6O75380 124 aaKnown RBP1.89□□□□□ -2.11
PABPC1-206ENST00000518293 CDS2O95674 445 aa1.89□□□□□ -2.11
PABPC1-206ENST00000518293 IGHV3-53P01767 116 aa1.89□□□□□ -2.11
PABPC1-206ENST00000518293 GPX1P07203 203 aa1.89□□□□□ -2.11
PABPC1-206ENST00000518293 OR10J4P0C629 311 aa1.89□□□□□ -2.11
PABPC1-206ENST00000518293 HIST1H1EP10412 219 aaKnown RBP1.89□□□□□ -2.11
PABPC1-206ENST00000518293 UBE2MP61081 183 aaKnown RBP1.89□□□□□ -2.11
PABPC1-206ENST00000518293 AKR1C1Q04828 323 aa1.89□□□□□ -2.11
PABPC1-206ENST00000518293 SMCO1Q147U7 214 aa1.89□□□□□ -2.11
PABPC1-206ENST00000518293 TMEM78Q5T7P6 136 aa1.89□□□□□ -2.11
PABPC1-206ENST00000518293 LELP1Q5T871 98 aa1.89□□□□□ -2.11
PABPC1-206ENST00000518293 NTM-AS1Q6ZSK4 140 aa1.89□□□□□ -2.11
PABPC1-206ENST00000518293 C12orf45Q8N5I9 185 aaPredicted RBP1.89□□□□□ -2.11
PABPC1-206ENST00000518293 MITD1Q8WV92 249 aa1.89□□□□□ -2.11
PABPC1-206ENST00000518293 ZC2HC1AQ96GY0 325 aa1.89□□□□□ -2.11
PABPC1-206ENST00000518293 SCGB3A2Q96PL1 93 aa1.89□□□□□ -2.11
PABPC1-206ENST00000518293 TP53RKQ96S44 253 aa1.89□□□□□ -2.11
PABPC1-206ENST00000518293 SHANK2-AS3Q9BTD1 123 aa1.89□□□□□ -2.11
PABPC1-206ENST00000518293 SRRQ9GZT4 340 aa1.89□□□□□ -2.11
PABPC1-206ENST00000518293 TMEM222Q9H0R3 208 aa1.89□□□□□ -2.11
PABPC1-206ENST00000518293 TREM1Q9NP99 234 aa1.89□□□□□ -2.11
PABPC1-206ENST00000518293 TXNL4BQ9NX01 149 aaKnown RBP1.89□□□□□ -2.11
PABPC1-206ENST00000518293 ANAPC10Q9UM13 185 aa1.89□□□□□ -2.11
PABPC1-206ENST00000518293 PRELID1Q9Y255 219 aa1.89□□□□□ -2.11
PABPC1-206ENST00000518293 KLF12Q9Y4X4 402 aa1.89□□□□□ -2.11
PABPC1-206ENST00000518293 A0A087WX48 190 aa1.88□□□□□ -2.11
PABPC1-206ENST00000518293 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.88□□□□□ -2.11
PABPC1-206ENST00000518293 TRAV8-2A0A0B4J237 113 aa1.88□□□□□ -2.11
PABPC1-206ENST00000518293 TRAV4A0A0B4J268 109 aa1.88□□□□□ -2.11
PABPC1-206ENST00000518293 SMCO3A2RU48 225 aa1.88□□□□□ -2.11
PABPC1-206ENST00000518293 DISC1C4P0D8 188 aa1.88□□□□□ -2.11
PABPC1-206ENST00000518293 HSBP1L1C9JCN9 74 aa1.88□□□□□ -2.11
PABPC1-206ENST00000518293 H3BRN7 92 aa1.88□□□□□ -2.11
PABPC1-206ENST00000518293 GOSR2O14653 212 aa1.88□□□□□ -2.11
PABPC1-206ENST00000518293 LECT2O14960 151 aa1.88□□□□□ -2.11
PABPC1-206ENST00000518293 IGHV3-30P01768 117 aa1.88□□□□□ -2.11
PABPC1-206ENST00000518293 IGHV3-33P01772 117 aa1.88□□□□□ -2.11
PABPC1-206ENST00000518293 GNAO1P09471 354 aa1.88□□□□□ -2.11
PABPC1-206ENST00000518293 MT1HL1P0DM35 61 aa1.88□□□□□ -2.11
PABPC1-206ENST00000518293 IGHV3-30-3P0DP02 117 aa1.88□□□□□ -2.11
PABPC1-206ENST00000518293 IGHV3-30-5P0DP03 117 aa1.88□□□□□ -2.11
PABPC1-206ENST00000518293 RNASE4P34096 147 aaKnown RBP1.88□□□□□ -2.11
PABPC1-206ENST00000518293 SDC2P34741 201 aa1.88□□□□□ -2.11
PABPC1-206ENST00000518293 KRTAP10-4P60372 401 aaPredicted RBP1.88□□□□□ -2.11
PABPC1-206ENST00000518293 MXD1Q05195 221 aa1.88□□□□□ -2.11
PABPC1-206ENST00000518293 Q0VG73 95 aa1.88□□□□□ -2.11
PABPC1-206ENST00000518293 ERCC8Q13216 396 aa1.88□□□□□ -2.11
PABPC1-206ENST00000518293 SURF2Q15527 256 aaPredicted RBP1.88□□□□□ -2.11
PABPC1-206ENST00000518293 RHOHQ15669 191 aa1.88□□□□□ -2.11
PABPC1-206ENST00000518293 SP6Q3SY56 376 aa1.88□□□□□ -2.11
PABPC1-206ENST00000518293 SCGB2B2Q4G0G5 96 aa1.88□□□□□ -2.11
PABPC1-206ENST00000518293 OR10P1Q8NGE3 313 aa1.88□□□□□ -2.11
PABPC1-206ENST00000518293 LHFPL5Q8TAF8 219 aa1.88□□□□□ -2.11
PABPC1-206ENST00000518293 ZNF431Q8TF32 576 aaPredicted RBP1.88□□□□□ -2.11
PABPC1-206ENST00000518293 BAALCQ8WXS3 180 aa1.88□□□□□ -2.11
PABPC1-206ENST00000518293 LINC01600Q96MT4 127 aa1.88□□□□□ -2.11
PABPC1-206ENST00000518293 GTSF1LQ9H1H1 148 aa1.88□□□□□ -2.11
PABPC1-206ENST00000518293 VCX3BQ9H321 246 aa1.88□□□□□ -2.11
PABPC1-206ENST00000518293 MRPL16Q9NX20 251 aaKnown RBP1.88□□□□□ -2.11
PABPC1-206ENST00000518293 LRP1Q07954 4544 aaKnown RBP1.88□□□□□ -2.11
PABPC1-206ENST00000518293 RNF213Q63HN8 5207 aa1.88□□□□□ -2.11
PABPC1-206ENST00000518293 IGKV1D-37A0A075B6S9 117 aa1.87□□□□□ -2.11
PABPC1-206ENST00000518293 IGKV1OR2-108A0A075B7D4 117 aa1.87□□□□□ -2.11
PABPC1-206ENST00000518293 A0A0B4J2A0 478 aa1.87□□□□□ -2.11
PABPC1-206ENST00000518293 A0A0J9YXV3 536 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms