RNA–Protein interactions for RNA: ENST00000518040.5

SH2D4A-202, Transcript of SH2 domain containing 4A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SH2D4A, Length 1,697 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-202ENST00000518040 DPPA3Q6W0C5 159 aa6.31□□□□□ -1.4
SH2D4A-202ENST00000518040 EXOC3-AS1Q8N2X6 119 aa6.31□□□□□ -1.4
SH2D4A-202ENST00000518040 OR10G7Q8NGN6 311 aa6.31□□□□□ -1.4
SH2D4A-202ENST00000518040 ZC2HC1AQ96GY0 325 aa6.31□□□□□ -1.4
SH2D4A-202ENST00000518040 KRTAP4-11Q9BYQ6 195 aa6.31□□□□□ -1.4
SH2D4A-202ENST00000518040 A0A1W2PPV4 95 aa6.3□□□□□ -1.4
SH2D4A-202ENST00000518040 RBAKDNA6NC62 111 aa6.3□□□□□ -1.4
SH2D4A-202ENST00000518040 CDC34P49427 236 aaPredicted RBP6.3□□□□□ -1.4
SH2D4A-202ENST00000518040 GCSAMLQ5JQS6 135 aa6.3□□□□□ -1.4
SH2D4A-202ENST00000518040 FAM74A1Q5RGS3 127 aa6.3□□□□□ -1.4
SH2D4A-202ENST00000518040 ATRAIDQ6UW56 229 aa6.3□□□□□ -1.4
SH2D4A-202ENST00000518040 C9orf163Q8N9P6 203 aa6.3□□□□□ -1.4
SH2D4A-202ENST00000518040 CHCHD7Q9BUK0 85 aa6.3□□□□□ -1.4
SH2D4A-202ENST00000518040 CSN1S1P47710 185 aa6.3□□□□□ -1.4
SH2D4A-202ENST00000518040 SULT1A2P50226 295 aa6.3□□□□□ -1.4
SH2D4A-202ENST00000518040 KCNIP4Q6PIL6 250 aa6.3□□□□□ -1.4
SH2D4A-202ENST00000518040 NIT1Q86X76 327 aa6.3□□□□□ -1.4
SH2D4A-202ENST00000518040 FAM213BQ8TBF2 198 aa6.3□□□□□ -1.4
SH2D4A-202ENST00000518040 KCNS1Q96KK3 526 aa6.3□□□□□ -1.4
SH2D4A-202ENST00000518040 ACTR3CQ9C0K3 210 aaPredicted RBP6.3□□□□□ -1.4
SH2D4A-202ENST00000518040 A0A0J9YXV3 536 aa6.29□□□□□ -1.4
SH2D4A-202ENST00000518040 CTXND1A0A1B0GTU2 59 aa6.29□□□□□ -1.4
SH2D4A-202ENST00000518040 TAS2R45P59539 299 aa6.29□□□□□ -1.4
SH2D4A-202ENST00000518040 RPL19P84098 196 aaKnown RBP6.29□□□□□ -1.4
SH2D4A-202ENST00000518040 CFAP126Q5VTH2 177 aa6.29□□□□□ -1.4
SH2D4A-202ENST00000518040 CYB561D1Q8N8Q1 229 aa6.29□□□□□ -1.4
SH2D4A-202ENST00000518040 Q8TAT8 98 aa6.29□□□□□ -1.4
SH2D4A-202ENST00000518040 UBE2WQ96B02 151 aa6.29□□□□□ -1.4
SH2D4A-202ENST00000518040 RNF185Q96GF1 192 aa6.29□□□□□ -1.4
SH2D4A-202ENST00000518040 C1orf43Q9BWL3 253 aa6.29□□□□□ -1.4
SH2D4A-202ENST00000518040 NAGKQ9UJ70 344 aa6.29□□□□□ -1.4
SH2D4A-202ENST00000518040 KLK12Q9UKR0 248 aa6.29□□□□□ -1.4
SH2D4A-202ENST00000518040 DIRC3C9JPN6 131 aa6.28□□□□□ -1.4
SH2D4A-202ENST00000518040 FHITP49789 147 aa6.28□□□□□ -1.4
SH2D4A-202ENST00000518040 BLOC1S1P78537 153 aa6.28□□□□□ -1.4
SH2D4A-202ENST00000518040 ZNF876PQ49A33 203 aa6.28□□□□□ -1.4
SH2D4A-202ENST00000518040 KHDC3LQ587J8 217 aa6.28□□□□□ -1.4
SH2D4A-202ENST00000518040 RAB24Q969Q5 203 aa6.28□□□□□ -1.4
SH2D4A-202ENST00000518040 SDF2L1Q9HCN8 221 aa6.28□□□□□ -1.4
SH2D4A-202ENST00000518040 A0A087WX48 190 aa6.27□□□□□ -1.41
SH2D4A-202ENST00000518040 MAP1LC3B2A6NCE7 125 aa6.27□□□□□ -1.41
SH2D4A-202ENST00000518040 TEX46H3BTG2 121 aa6.27□□□□□ -1.41
SH2D4A-202ENST00000518040 GNRH2O43555 120 aa6.27□□□□□ -1.41
SH2D4A-202ENST00000518040 OR7C2O60412 319 aa6.27□□□□□ -1.41
SH2D4A-202ENST00000518040 FGF8P55075 233 aaPredicted RBP6.27□□□□□ -1.41
SH2D4A-202ENST00000518040 RAB14P61106 215 aa6.27□□□□□ -1.41
SH2D4A-202ENST00000518040 IFITM2Q01629 132 aa6.27□□□□□ -1.41
SH2D4A-202ENST00000518040 MIR17HGQ75NE6 70 aa6.27□□□□□ -1.41
SH2D4A-202ENST00000518040 C7orf33Q8WU49 177 aa6.27□□□□□ -1.41
SH2D4A-202ENST00000518040 MAP1LC3BQ9GZQ8 125 aa6.27□□□□□ -1.41
SH2D4A-202ENST00000518040 TRAV21A0A0B4J279 112 aa6.26□□□□□ -1.41
SH2D4A-202ENST00000518040 PGPA6NDG6 321 aa6.26□□□□□ -1.41
SH2D4A-202ENST00000518040 HMGB3O15347 200 aaKnown RBP6.26□□□□□ -1.41
SH2D4A-202ENST00000518040 CXorf1O96002 111 aa6.26□□□□□ -1.41
SH2D4A-202ENST00000518040 TYMSP04818 313 aa6.26□□□□□ -1.41
SH2D4A-202ENST00000518040 NBEAP1P0C6P0 100 aa6.26□□□□□ -1.41
SH2D4A-202ENST00000518040 STAG3L2P0CL84 134 aa6.26□□□□□ -1.41
SH2D4A-202ENST00000518040 STAG3L3P0CL85 134 aa6.26□□□□□ -1.41
SH2D4A-202ENST00000518040 PYYP10082 97 aa6.26□□□□□ -1.41
SH2D4A-202ENST00000518040 CIRBPQ14011 172 aaKnown RBP6.26□□□□□ -1.41
SH2D4A-202ENST00000518040 ZNF726P1Q15940 193 aa6.26□□□□□ -1.41
SH2D4A-202ENST00000518040 WDR73Q6P4I2 378 aa6.26□□□□□ -1.41
SH2D4A-202ENST00000518040 REG3GQ6UW15 175 aa6.26□□□□□ -1.41
SH2D4A-202ENST00000518040 PQLC2Q6ZP29 291 aa6.26□□□□□ -1.41
SH2D4A-202ENST00000518040 SFT2D1Q8WV19 159 aa6.26□□□□□ -1.41
SH2D4A-202ENST00000518040 SLC25A2Q9BXI2 301 aa6.26□□□□□ -1.41
SH2D4A-202ENST00000518040 IGHV3-73A0A0B4J1V6 119 aa6.26□□□□□ -1.41
SH2D4A-202ENST00000518040 ARL14EPLP0DKL9 152 aa6.26□□□□□ -1.41
SH2D4A-202ENST00000518040 LINC00694P0DN24 101 aa6.26□□□□□ -1.41
SH2D4A-202ENST00000518040 LINC00310P59036 64 aa6.26□□□□□ -1.41
SH2D4A-202ENST00000518040 KRTAP10-8P60410 259 aa6.26□□□□□ -1.41
SH2D4A-202ENST00000518040 ODF1Q14990 250 aa6.26□□□□□ -1.41
SH2D4A-202ENST00000518040 SDIM1Q6ZPB5 146 aa6.26□□□□□ -1.41
SH2D4A-202ENST00000518040 PTH2Q96A98 100 aa6.26□□□□□ -1.41
SH2D4A-202ENST00000518040 DPH3Q96FX2 82 aa6.26□□□□□ -1.41
SH2D4A-202ENST00000518040 GAGE12JA6NER3 117 aa6.25□□□□□ -1.41
SH2D4A-202ENST00000518040 USP17L23D6RBM5 183 aa6.25□□□□□ -1.41
SH2D4A-202ENST00000518040 EIF3GO75821 320 aaKnown RBP eCLIP6.25□□□□□ -1.41
SH2D4A-202ENST00000518040 UBE2L3P68036 154 aaKnown RBP6.25□□□□□ -1.41
SH2D4A-202ENST00000518040 GAGE1Q13065 139 aa6.25□□□□□ -1.41
SH2D4A-202ENST00000518040 GAGE4Q13068 117 aa6.25□□□□□ -1.41
SH2D4A-202ENST00000518040 GAGE5Q13069 117 aa6.25□□□□□ -1.41
SH2D4A-202ENST00000518040 GAGE13Q4V321 117 aa6.25□□□□□ -1.41
SH2D4A-202ENST00000518040 ZFP2Q6ZN57 461 aa6.25□□□□□ -1.41
SH2D4A-202ENST00000518040 MBD3L1Q8WWY6 194 aa6.25□□□□□ -1.41
SH2D4A-202ENST00000518040 FAM167A-AS1Q96KT0 104 aa6.25□□□□□ -1.41
SH2D4A-202ENST00000518040 DNAJC30Q96LL9 226 aa6.25□□□□□ -1.41
SH2D4A-202ENST00000518040 TRAV1-1A0A0B4J248 108 aa6.24□□□□□ -1.41
SH2D4A-202ENST00000518040 A0A1B0GV50 99 aa6.24□□□□□ -1.41
SH2D4A-202ENST00000518040 CRPP02741 224 aa6.24□□□□□ -1.41
SH2D4A-202ENST00000518040 PRSS1P07477 247 aa6.24□□□□□ -1.41
SH2D4A-202ENST00000518040 TMEM167BQ9NRX6 74 aa6.24□□□□□ -1.41
SH2D4A-202ENST00000518040 PANO1I0J062 215 aa6.23□□□□□ -1.41
SH2D4A-202ENST00000518040 GCHFRP30047 84 aa6.23□□□□□ -1.41
SH2D4A-202ENST00000518040 CLLU1Q5K131 121 aa6.23□□□□□ -1.41
SH2D4A-202ENST00000518040 LCE5AQ5TCM9 118 aa6.23□□□□□ -1.41
SH2D4A-202ENST00000518040 CLRN3Q8NCR9 226 aa6.23□□□□□ -1.41
SH2D4A-202ENST00000518040 A8MWV9 139 aa6.23□□□□□ -1.41
SH2D4A-202ENST00000518040 IFNA1P01562 189 aa6.23□□□□□ -1.41
SH2D4A-202ENST00000518040 SLC7A5P1Q8MH63 180 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms