RNA–Protein interactions for RNA: ENST00000517378.1

CDH12-203, Transcript of cadherin 12, humanhuman

TSL 1 (best)

Gene CDH12, Length 2,843 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-203ENST00000517378 CCL19Q99731 98 aa4.97□□□□□ -1.61
CDH12-203ENST00000517378 CACNA1BQ00975 2339 aa4.97□□□□□ -1.61
CDH12-203ENST00000517378 IGSF10Q6WRI0 2623 aa4.97□□□□□ -1.61
CDH12-203ENST00000517378 IGHV3-16A0A0C4DH30 117 aa4.96□□□□□ -1.61
CDH12-203ENST00000517378 H3BMG7 143 aa4.96□□□□□ -1.61
CDH12-203ENST00000517378 CD7P09564 240 aa4.96□□□□□ -1.61
CDH12-203ENST00000517378 SCGB1A1P11684 91 aa4.96□□□□□ -1.61
CDH12-203ENST00000517378 HERVK_113P61574 105 aa4.96□□□□□ -1.61
CDH12-203ENST00000517378 RPL24P83731 157 aaKnown RBP4.96□□□□□ -1.61
CDH12-203ENST00000517378 ZNF876PQ49A33 203 aa4.96□□□□□ -1.61
CDH12-203ENST00000517378 USP24Q9UPU5 2620 aa4.96□□□□□ -1.62
CDH12-203ENST00000517378 HOXA3O43365 443 aaPredicted RBP4.96□□□□□ -1.62
CDH12-203ENST00000517378 EDN2P20800 178 aa4.96□□□□□ -1.62
CDH12-203ENST00000517378 GNLYP22749 145 aa4.96□□□□□ -1.62
CDH12-203ENST00000517378 WFDC2Q14508 124 aa4.96□□□□□ -1.62
CDH12-203ENST00000517378 RHOHQ15669 191 aa4.96□□□□□ -1.62
CDH12-203ENST00000517378 GAGE13Q4V321 117 aa4.96□□□□□ -1.62
CDH12-203ENST00000517378 CLEC2AQ6UVW9 174 aa4.96□□□□□ -1.62
CDH12-203ENST00000517378 PLEKHB2Q96CS7 222 aa4.96□□□□□ -1.62
CDH12-203ENST00000517378 SPATA25Q9BR10 227 aa4.96□□□□□ -1.62
CDH12-203ENST00000517378 COL6A6A6NMZ7 2263 aa4.96□□□□□ -1.62
CDH12-203ENST00000517378 IGHV4-30-2A0A087WSY4 118 aa4.96□□□□□ -1.62
CDH12-203ENST00000517378 A0A0J9YX75 114 aa4.96□□□□□ -1.62
CDH12-203ENST00000517378 A0A0J9YY99 117 aa4.96□□□□□ -1.62
CDH12-203ENST00000517378 SDHAF1A6NFY7 115 aa4.96□□□□□ -1.62
CDH12-203ENST00000517378 TMEM238C9JI98 176 aa4.96□□□□□ -1.62
CDH12-203ENST00000517378 GATA3P23771 443 aa4.96□□□□□ -1.62
CDH12-203ENST00000517378 UBE2D3P61077 147 aa4.96□□□□□ -1.62
CDH12-203ENST00000517378 UBE2D2P62837 147 aa4.96□□□□□ -1.62
CDH12-203ENST00000517378 NFE4Q86UQ8 179 aa4.96□□□□□ -1.62
CDH12-203ENST00000517378 AMELXQ99217 191 aa4.96□□□□□ -1.62
CDH12-203ENST00000517378 ZNF256Q9Y2P7 627 aaPredicted RBP4.96□□□□□ -1.62
CDH12-203ENST00000517378 J3QR89 54 aa4.95□□□□□ -1.62
CDH12-203ENST00000517378 K7EQG2 157 aa4.95□□□□□ -1.62
CDH12-203ENST00000517378 M0QY20 66 aa4.95□□□□□ -1.62
CDH12-203ENST00000517378 SCGB2A2Q13296 93 aa4.95□□□□□ -1.62
CDH12-203ENST00000517378 ATP6V0E2Q8NHE4 81 aa4.95□□□□□ -1.62
CDH12-203ENST00000517378 JPT2Q9H910 190 aa4.95□□□□□ -1.62
CDH12-203ENST00000517378 EDA2RQ9HAV5 297 aa4.95□□□□□ -1.62
CDH12-203ENST00000517378 PGPEP1Q9NXJ5 209 aa4.95□□□□□ -1.62
CDH12-203ENST00000517378 IGKV3-7A0A075B6H7 116 aa4.95□□□□□ -1.62
CDH12-203ENST00000517378 TSPAN13O95857 204 aa4.95□□□□□ -1.62
CDH12-203ENST00000517378 RPL39P62891 51 aaKnown RBP4.95□□□□□ -1.62
CDH12-203ENST00000517378 CD300EQ496F6 205 aaPredicted RBP4.95□□□□□ -1.62
CDH12-203ENST00000517378 CFAP126Q5VTH2 177 aa4.95□□□□□ -1.62
CDH12-203ENST00000517378 SCGB1D4Q6XE38 83 aa4.95□□□□□ -1.62
CDH12-203ENST00000517378 SYT8Q8NBV8 401 aa4.95□□□□□ -1.62
CDH12-203ENST00000517378 A0A087WWL8 130 aa4.94□□□□□ -1.62
CDH12-203ENST00000517378 TRAV12-3A0A0B4J271 114 aa4.94□□□□□ -1.62
CDH12-203ENST00000517378 B4DSR2 109 aa4.94□□□□□ -1.62
CDH12-203ENST00000517378 IGHV3-30P01768 117 aa4.94□□□□□ -1.62
CDH12-203ENST00000517378 IGHV3-30-5P0DP03 117 aa4.94□□□□□ -1.62
CDH12-203ENST00000517378 SRD5A1P18405 259 aa4.94□□□□□ -1.62
CDH12-203ENST00000517378 TSPEAR-AS2P59090 65 aa4.94□□□□□ -1.62
CDH12-203ENST00000517378 AMTNQ6UX39 209 aa4.94□□□□□ -1.62
CDH12-203ENST00000517378 SLC25A29Q8N8R3 303 aa4.94□□□□□ -1.62
CDH12-203ENST00000517378 ZNRF2Q8NHG8 242 aa4.94□□□□□ -1.62
CDH12-203ENST00000517378 DLX4Q92988 240 aaPredicted RBP4.94□□□□□ -1.62
CDH12-203ENST00000517378 MRPL16Q9NX20 251 aaKnown RBP4.94□□□□□ -1.62
CDH12-203ENST00000517378 MED13LQ71F56 2210 aa4.94□□□□□ -1.62
CDH12-203ENST00000517378 MYO18BQ8IUG5 2567 aa4.94□□□□□ -1.62
CDH12-203ENST00000517378 AVPP01185 164 aa4.94□□□□□ -1.62
CDH12-203ENST00000517378 ATP5J2P56134 94 aa4.94□□□□□ -1.62
CDH12-203ENST00000517378 SNRPD3P62318 126 aaKnown RBP4.94□□□□□ -1.62
CDH12-203ENST00000517378 TRPT1Q86TN4 253 aaKnown RBP4.94□□□□□ -1.62
CDH12-203ENST00000517378 NDUFA11Q86Y39 141 aa4.94□□□□□ -1.62
CDH12-203ENST00000517378 KLHL30-AS1Q8NEE0 82 aa4.94□□□□□ -1.62
CDH12-203ENST00000517378 SPAG8Q99932 426 aaPredicted RBP4.94□□□□□ -1.62
CDH12-203ENST00000517378 IGHV1OR15-1A0A075B7D0 117 aa4.93□□□□□ -1.62
CDH12-203ENST00000517378 SRSF9Q13242 221 aaKnown RBP eCLIP4.93□□□□□ -1.62
CDH12-203ENST00000517378 ETDBQ3ZM63 59 aa4.93□□□□□ -1.62
CDH12-203ENST00000517378 LYRM7Q5U5X0 104 aa4.93□□□□□ -1.62
CDH12-203ENST00000517378 Q8N1Y9 231 aa4.93□□□□□ -1.62
CDH12-203ENST00000517378 C1QTNF4Q9BXJ3 329 aa4.93□□□□□ -1.62
CDH12-203ENST00000517378 MDFICQ9P1T7 246 aa4.93□□□□□ -1.62
CDH12-203ENST00000517378 GAGE12HA6NDE8 117 aa4.93□□□□□ -1.62
CDH12-203ENST00000517378 A8MTW9 85 aa4.93□□□□□ -1.62
CDH12-203ENST00000517378 ZNF688P0C7X2 276 aa4.93□□□□□ -1.62
CDH12-203ENST00000517378 DSCR9P59020 149 aa4.93□□□□□ -1.62
CDH12-203ENST00000517378 TMEM95Q3KNT9 176 aa4.93□□□□□ -1.62
CDH12-203ENST00000517378 SH2D6Q7Z4S9 175 aa4.93□□□□□ -1.62
CDH12-203ENST00000517378 TSSC4Q9Y5U2 329 aaPredicted RBP4.93□□□□□ -1.62
CDH12-203ENST00000517378 TMEM223A0PJW6 202 aa4.92□□□□□ -1.62
CDH12-203ENST00000517378 F5H697 171 aa4.92□□□□□ -1.62
CDH12-203ENST00000517378 J3QQQ9 107 aa4.92□□□□□ -1.62
CDH12-203ENST00000517378 LEPROTO15243 131 aa4.92□□□□□ -1.62
CDH12-203ENST00000517378 P0DMU3 169 aa4.92□□□□□ -1.62
CDH12-203ENST00000517378 FAM231AP0DMU4 169 aa4.92□□□□□ -1.62
CDH12-203ENST00000517378 FAM231CP0DMU5 169 aa4.92□□□□□ -1.62
CDH12-203ENST00000517378 SMCPP49901 116 aaPredicted RBP4.92□□□□□ -1.62
CDH12-203ENST00000517378 SBSPONQ8IVN8 264 aa4.92□□□□□ -1.62
CDH12-203ENST00000517378 C20orf203Q8NBC4 194 aa4.92□□□□□ -1.62
CDH12-203ENST00000517378 SIGMAR1Q99720 223 aa4.92□□□□□ -1.62
CDH12-203ENST00000517378 SPTBN1Q01082 2364 aaKnown RBP4.92□□□□□ -1.62
CDH12-203ENST00000517378 TRGV11A0A075B6L2 103 aa4.92□□□□□ -1.62
CDH12-203ENST00000517378 TRBV20-1A0A075B6N2 111 aa4.92□□□□□ -1.62
CDH12-203ENST00000517378 CFC1BP0CG36 223 aa4.92□□□□□ -1.62
CDH12-203ENST00000517378 CFC1P0CG37 223 aa4.92□□□□□ -1.62
CDH12-203ENST00000517378 ZNF56Q15929 161 aa4.92□□□□□ -1.62
CDH12-203ENST00000517378 A0A096LNT2 108 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms