RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 SCRT2Q9NQ03 307 aa3.87□□□□□ -1.79
SCARNA16.4-201ENST00000516956 CARHSP1Q9Y2V2 147 aaKnown RBP3.87□□□□□ -1.79
SCARNA16.4-201ENST00000516956 V9GYV3 84 aa3.87□□□□□ -1.79
SCARNA16.4-201ENST00000516956 TGP01266 2768 aa3.87□□□□□ -1.79
SCARNA16.4-201ENST00000516956 IGHV4-4A0A075B6R2 117 aa3.86□□□□□ -1.79
SCARNA16.4-201ENST00000516956 TRAV26-1A0A087WT03 109 aa3.86□□□□□ -1.79
SCARNA16.4-201ENST00000516956 SMIM27A0A1W2PRY6 76 aa3.86□□□□□ -1.79
SCARNA16.4-201ENST00000516956 IGLC6P0CF74 106 aa3.86□□□□□ -1.79
SCARNA16.4-201ENST00000516956 SRIP30626 198 aa3.86□□□□□ -1.79
SCARNA16.4-201ENST00000516956 CTRLP40313 264 aa3.86□□□□□ -1.79
SCARNA16.4-201ENST00000516956 CAMPP49913 170 aa3.86□□□□□ -1.79
SCARNA16.4-201ENST00000516956 RHOHQ15669 191 aa3.86□□□□□ -1.79
SCARNA16.4-201ENST00000516956 MRPL23Q16540 153 aaKnown RBP3.86□□□□□ -1.79
SCARNA16.4-201ENST00000516956 TMEM88Q6PEY1 159 aa3.86□□□□□ -1.79
SCARNA16.4-201ENST00000516956 LINC00612Q8N6U2 182 aa3.86□□□□□ -1.79
SCARNA16.4-201ENST00000516956 C14orf178Q8N769 122 aaPredicted RBP3.86□□□□□ -1.79
SCARNA16.4-201ENST00000516956 ZNF479Q96JC4 524 aa3.86□□□□□ -1.79
SCARNA16.4-201ENST00000516956 TNFRSF18Q9Y5U5 241 aa3.86□□□□□ -1.79
SCARNA16.4-201ENST00000516956 ICOSQ9Y6W8 199 aa3.86□□□□□ -1.79
SCARNA16.4-201ENST00000516956 A0A087WWC5 75 aa3.85□□□□□ -1.79
SCARNA16.4-201ENST00000516956 TRBV6-4A0A1B0GX49 114 aa3.85□□□□□ -1.79
SCARNA16.4-201ENST00000516956 C7orf77A4D0Y5 90 aa3.85□□□□□ -1.79
SCARNA16.4-201ENST00000516956 H3BNG1 76 aa3.85□□□□□ -1.79
SCARNA16.4-201ENST00000516956 K7EQD1 137 aa3.85□□□□□ -1.79
SCARNA16.4-201ENST00000516956 PPP1R17O96001 155 aa3.85□□□□□ -1.79
SCARNA16.4-201ENST00000516956 GYPEP15421 78 aa3.85□□□□□ -1.79
SCARNA16.4-201ENST00000516956 ADCYAP1P18509 176 aa3.85□□□□□ -1.79
SCARNA16.4-201ENST00000516956 CRYBA4P53673 196 aa3.85□□□□□ -1.79
SCARNA16.4-201ENST00000516956 FOXA3P55318 350 aaPredicted RBP3.85□□□□□ -1.79
SCARNA16.4-201ENST00000516956 CCL18P55774 89 aa3.85□□□□□ -1.79
SCARNA16.4-201ENST00000516956 FAM3BP58499 235 aaPredicted RBP3.85□□□□□ -1.79
SCARNA16.4-201ENST00000516956 HBBP68871 147 aa3.85□□□□□ -1.79
SCARNA16.4-201ENST00000516956 RPL36AP83881 106 aaKnown RBP3.85□□□□□ -1.79
SCARNA16.4-201ENST00000516956 FHL2Q14192 279 aa3.85□□□□□ -1.79
SCARNA16.4-201ENST00000516956 MRPL54Q6P161 138 aaKnown RBP3.85□□□□□ -1.79
SCARNA16.4-201ENST00000516956 NUP35Q8NFH5 326 aa3.85□□□□□ -1.79
SCARNA16.4-201ENST00000516956 GTSF1Q8WW33 167 aa3.85□□□□□ -1.79
SCARNA16.4-201ENST00000516956 RPL36ALQ969Q0 106 aaKnown RBP3.85□□□□□ -1.79
SCARNA16.4-201ENST00000516956 IMMP2LQ96T52 175 aa3.85□□□□□ -1.79
SCARNA16.4-201ENST00000516956 JPT2Q9H910 190 aa3.85□□□□□ -1.79
SCARNA16.4-201ENST00000516956 COL7A1Q02388 2944 aa3.84□□□□□ -1.79
SCARNA16.4-201ENST00000516956 TRAV9-1A0A075B6T8 112 aa3.84□□□□□ -1.79
SCARNA16.4-201ENST00000516956 GAGE12JA6NER3 117 aa3.84□□□□□ -1.79
SCARNA16.4-201ENST00000516956 NXPH4O95158 308 aa3.84□□□□□ -1.79
SCARNA16.4-201ENST00000516956 P0DMU3 169 aa3.84□□□□□ -1.79
SCARNA16.4-201ENST00000516956 FAM231AP0DMU4 169 aa3.84□□□□□ -1.79
SCARNA16.4-201ENST00000516956 FAM231CP0DMU5 169 aa3.84□□□□□ -1.79
SCARNA16.4-201ENST00000516956 GATA1P15976 413 aaPredicted RBP3.84□□□□□ -1.79
SCARNA16.4-201ENST00000516956 HOXA5P20719 270 aa3.84□□□□□ -1.79
SCARNA16.4-201ENST00000516956 EVI2AP22794 236 aa3.84□□□□□ -1.79
SCARNA16.4-201ENST00000516956 GAGE1Q13065 139 aa3.84□□□□□ -1.79
SCARNA16.4-201ENST00000516956 GAGE4Q13068 117 aa3.84□□□□□ -1.79
SCARNA16.4-201ENST00000516956 GAGE5Q13069 117 aa3.84□□□□□ -1.79
SCARNA16.4-201ENST00000516956 COX19Q49B96 90 aa3.84□□□□□ -1.79
SCARNA16.4-201ENST00000516956 GAGE13Q4V321 117 aa3.84□□□□□ -1.79
SCARNA16.4-201ENST00000516956 C10orf91Q5T1B1 145 aa3.84□□□□□ -1.79
SCARNA16.4-201ENST00000516956 CASC10Q5T4H9 136 aa3.84□□□□□ -1.79
SCARNA16.4-201ENST00000516956 NEGR1Q7Z3B1 354 aa3.84□□□□□ -1.79
SCARNA16.4-201ENST00000516956 ATP5L2Q7Z4Y8 100 aa3.84□□□□□ -1.79
SCARNA16.4-201ENST00000516956 CNFNQ9BYD5 112 aa3.84□□□□□ -1.79
SCARNA16.4-201ENST00000516956 TMEM191AQ9H0A3 160 aa3.84□□□□□ -1.79
SCARNA16.4-201ENST00000516956 TMEM242Q9NWH2 141 aa3.84□□□□□ -1.79
SCARNA16.4-201ENST00000516956 MSRB1Q9NZV6 116 aa3.84□□□□□ -1.79
SCARNA16.4-201ENST00000516956 URGCP-MRPS24S4R325 110 aa3.84□□□□□ -1.79
SCARNA16.4-201ENST00000516956 CMYA5Q8N3K9 4069 aa3.84□□□□□ -1.79
SCARNA16.4-201ENST00000516956 TENM3Q9P273 2699 aa3.84□□□□□ -1.8
SCARNA16.4-201ENST00000516956 STAB2Q8WWQ8 2551 aa3.83□□□□□ -1.8
SCARNA16.4-201ENST00000516956 A0A096LPF7 62 aa3.83□□□□□ -1.8
SCARNA16.4-201ENST00000516956 TRBV10-1A0A0K0K1A3 114 aa3.83□□□□□ -1.8
SCARNA16.4-201ENST00000516956 LY6G6CO95867 125 aa3.83□□□□□ -1.8
SCARNA16.4-201ENST00000516956 CRYGDP07320 174 aa3.83□□□□□ -1.8
SCARNA16.4-201ENST00000516956 S100A1P23297 94 aa3.83□□□□□ -1.8
SCARNA16.4-201ENST00000516956 CKS2P33552 79 aa3.83□□□□□ -1.8
SCARNA16.4-201ENST00000516956 TMEM97Q5BJF2 176 aa3.83□□□□□ -1.8
SCARNA16.4-201ENST00000516956 OR10J3Q5JRS4 329 aa3.83□□□□□ -1.8
SCARNA16.4-201ENST00000516956 RASL11AQ6T310 242 aa3.83□□□□□ -1.8
SCARNA16.4-201ENST00000516956 POM121L12Q8N7R1 296 aa3.83□□□□□ -1.8
SCARNA16.4-201ENST00000516956 SLC25A29Q8N8R3 303 aa3.83□□□□□ -1.8
SCARNA16.4-201ENST00000516956 ATP6V0E2Q8NHE4 81 aa3.83□□□□□ -1.8
SCARNA16.4-201ENST00000516956 ZNRF2Q8NHG8 242 aa3.83□□□□□ -1.8
SCARNA16.4-201ENST00000516956 FRZBQ92765 325 aa3.83□□□□□ -1.8
SCARNA16.4-201ENST00000516956 MRAP2Q96G30 205 aa3.83□□□□□ -1.8
SCARNA16.4-201ENST00000516956 DNAJC30Q96LL9 226 aa3.83□□□□□ -1.8
SCARNA16.4-201ENST00000516956 SAMD10Q9BYL1 202 aa3.83□□□□□ -1.8
SCARNA16.4-201ENST00000516956 SMCO4Q9NRQ5 59 aa3.83□□□□□ -1.8
SCARNA16.4-201ENST00000516956 TRBV7-3A0A075B6L6 115 aa3.82□□□□□ -1.8
SCARNA16.4-201ENST00000516956 TRAV8-6A0A0B4J262 113 aa3.82□□□□□ -1.8
SCARNA16.4-201ENST00000516956 PPBPP02775 128 aa3.82□□□□□ -1.8
SCARNA16.4-201ENST00000516956 SUMO4Q6EEV6 95 aa3.82□□□□□ -1.8
SCARNA16.4-201ENST00000516956 ZNF575Q86XF7 245 aa3.82□□□□□ -1.8
SCARNA16.4-201ENST00000516956 ST20Q9HBF5 79 aa3.82□□□□□ -1.8
SCARNA16.4-201ENST00000516956 NIT2Q9NQR4 276 aa3.82□□□□□ -1.8
SCARNA16.4-201ENST00000516956 APLNQ9ULZ1 77 aa3.82□□□□□ -1.8
SCARNA16.4-201ENST00000516956 DNAH3Q8TD57 4116 aa3.81□□□□□ -1.8
SCARNA16.4-201ENST00000516956 TRAV9-2A0A087WT02 112 aa3.81□□□□□ -1.8
SCARNA16.4-201ENST00000516956 LOC100131303A0A0U1RQF7 123 aa3.81□□□□□ -1.8
SCARNA16.4-201ENST00000516956 HLA-DQA1P01909 254 aa3.81□□□□□ -1.8
SCARNA16.4-201ENST00000516956 APCSP02743 223 aa3.81□□□□□ -1.8
SCARNA16.4-201ENST00000516956 MT-ND6P03923 174 aa3.81□□□□□ -1.8
SCARNA16.4-201ENST00000516956 RAB4AP20338 218 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms