RNA–Protein interactions for RNA: ENST00000516379.1

SNORA40.13-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 120 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.13-201ENST00000516379 LXNQ9BS40 222 aa-4.1□□□□□ -3.07
SNORA40.13-201ENST00000516379 TLN2Q9Y4G6 2542 aa-4.1□□□□□ -3.07
SNORA40.13-201ENST00000516379 SAA1P0DJI8 122 aaPredicted RBP-4.11□□□□□ -3.07
SNORA40.13-201ENST00000516379 COX5BP10606 129 aa-4.11□□□□□ -3.07
SNORA40.13-201ENST00000516379 EDDM3BP56851 147 aa-4.11□□□□□ -3.07
SNORA40.13-201ENST00000516379 MED21Q13503 144 aa-4.11□□□□□ -3.07
SNORA40.13-201ENST00000516379 C8orf76Q96K31 380 aa-4.11□□□□□ -3.07
SNORA40.13-201ENST00000516379 MCEEQ96PE7 176 aa-4.11□□□□□ -3.07
SNORA40.13-201ENST00000516379 VPS25Q9BRG1 176 aa-4.11□□□□□ -3.07
SNORA40.13-201ENST00000516379 C5orf58C9J3I9 102 aa-4.12□□□□□ -3.07
SNORA40.13-201ENST00000516379 IFNA7P01567 189 aa-4.12□□□□□ -3.07
SNORA40.13-201ENST00000516379 RPL35P42766 123 aaKnown RBP-4.12□□□□□ -3.07
SNORA40.13-201ENST00000516379 PMS2P3Q13401 168 aa-4.12□□□□□ -3.07
SNORA40.13-201ENST00000516379 PPDPFLQ8WWR9 84 aa-4.12□□□□□ -3.07
SNORA40.13-201ENST00000516379 BORCS7Q96B45 105 aa-4.12□□□□□ -3.07
SNORA40.13-201ENST00000516379 PARVBQ9HBI1 364 aa-4.12□□□□□ -3.07
SNORA40.13-201ENST00000516379 FKBP11Q9NYL4 201 aa-4.12□□□□□ -3.07
SNORA40.13-201ENST00000516379 APOEP02649 317 aa-4.13□□□□□ -3.07
SNORA40.13-201ENST00000516379 ARF6P62330 175 aa-4.13□□□□□ -3.07
SNORA40.13-201ENST00000516379 OTUD6BQ8N6M0 293 aa-4.13□□□□□ -3.07
SNORA40.13-201ENST00000516379 IFI27L1Q96BM0 104 aa-4.13□□□□□ -3.07
SNORA40.13-201ENST00000516379 SIGMAR1Q99720 223 aa-4.13□□□□□ -3.07
SNORA40.13-201ENST00000516379 PAPPA2Q9BXP8 1791 aa-4.13□□□□□ -3.07
SNORA40.13-201ENST00000516379 PIK3C2GO75747 1445 aa-4.13□□□□□ -3.07
SNORA40.13-201ENST00000516379 LRRC37A2A6NM11 1700 aa-4.14□□□□□ -3.07
SNORA40.13-201ENST00000516379 M0QZ92 97 aa-4.14□□□□□ -3.07
SNORA40.13-201ENST00000516379 DCTN3O75935 186 aa-4.14□□□□□ -3.07
SNORA40.13-201ENST00000516379 APOA1P02647 267 aa-4.14□□□□□ -3.07
SNORA40.13-201ENST00000516379 TRGC2P03986 189 aa-4.14□□□□□ -3.07
SNORA40.13-201ENST00000516379 ERP29P30040 261 aaKnown RBP-4.14□□□□□ -3.07
SNORA40.13-201ENST00000516379 KRTAP19-5Q3LI72 72 aa-4.14□□□□□ -3.07
SNORA40.13-201ENST00000516379 TEX29Q8N6K0 151 aa-4.14□□□□□ -3.07
SNORA40.13-201ENST00000516379 DNAH5Q8TE73 4624 aa-4.14□□□□□ -3.07
SNORA40.13-201ENST00000516379 CD109Q6YHK3 1445 aa-4.14□□□□□ -3.07
SNORA40.13-201ENST00000516379 DNAH17Q9UFH2 4485 aa-4.15□□□□□ -3.07
SNORA40.13-201ENST00000516379 PTPRMP28827 1452 aa-4.15□□□□□ -3.07
SNORA40.13-201ENST00000516379 FABP12A6NFH5 140 aa-4.15□□□□□ -3.07
SNORA40.13-201ENST00000516379 C9orf92A6NGG3 77 aa-4.15□□□□□ -3.07
SNORA40.13-201ENST00000516379 SERPINA6P08185 405 aa-4.15□□□□□ -3.07
SNORA40.13-201ENST00000516379 KIAA0556O60303 1618 aa-4.16□□□□□ -3.08
SNORA40.13-201ENST00000516379 H0YJX3 145 aa-4.16□□□□□ -3.08
SNORA40.13-201ENST00000516379 K7EP34 96 aa-4.16□□□□□ -3.08
SNORA40.13-201ENST00000516379 IFNGP01579 166 aa-4.16□□□□□ -3.08
SNORA40.13-201ENST00000516379 TNNC2P02585 160 aa-4.16□□□□□ -3.08
SNORA40.13-201ENST00000516379 TPT1P13693 172 aaKnown RBP-4.16□□□□□ -3.08
SNORA40.13-201ENST00000516379 NDUFA11Q86Y39 141 aa-4.16□□□□□ -3.08
SNORA40.13-201ENST00000516379 GPATCH11Q8N954 259 aa-4.16□□□□□ -3.08
SNORA40.13-201ENST00000516379 FMN2Q9NZ56 1722 aa-4.17□□□□□ -3.08
SNORA40.13-201ENST00000516379 C9orf84Q5VXU9 1444 aa-4.17□□□□□ -3.08
SNORA40.13-201ENST00000516379 PDE6DO43924 150 aa-4.17□□□□□ -3.08
SNORA40.13-201ENST00000516379 BASP1P80723 227 aaKnown RBP-4.17□□□□□ -3.08
SNORA40.13-201ENST00000516379 OGFRL1Q5TC84 451 aaPredicted RBP-4.17□□□□□ -3.08
SNORA40.13-201ENST00000516379 BAGE3Q86Y29 109 aa-4.17□□□□□ -3.08
SNORA40.13-201ENST00000516379 GPX7Q96SL4 187 aaPredicted RBP-4.17□□□□□ -3.08
SNORA40.13-201ENST00000516379 FGFR1OP2Q9NVK5 253 aa-4.17□□□□□ -3.08
SNORA40.13-201ENST00000516379 BPTFQ12830 3046 aa-4.17□□□□□ -3.08
SNORA40.13-201ENST00000516379 LOC107986453A0A1B0GWG9 222 aa-4.18□□□□□ -3.08
SNORA40.13-201ENST00000516379 TMEM91Q6ZNR0 172 aa-4.18□□□□□ -3.08
SNORA40.13-201ENST00000516379 CAMSAP2Q08AD1 1489 aa-4.18□□□□□ -3.08
SNORA40.13-201ENST00000516379 SNAPC4Q5SXM2 1469 aa-4.18□□□□□ -3.08
SNORA40.13-201ENST00000516379 ANKRD50Q9ULJ7 1429 aa-4.19□□□□□ -3.08
SNORA40.13-201ENST00000516379 DLC1Q96QB1 1528 aa-4.19□□□□□ -3.08
SNORA40.13-201ENST00000516379 DYNC2H1Q8NCM8 4307 aaKnown RBP-4.19□□□□□ -3.08
SNORA40.13-201ENST00000516379 PITX3O75364 302 aa-4.19□□□□□ -3.08
SNORA40.13-201ENST00000516379 HIST1H1EP10412 219 aaKnown RBP-4.19□□□□□ -3.08
SNORA40.13-201ENST00000516379 CARD18P57730 90 aa-4.19□□□□□ -3.08
SNORA40.13-201ENST00000516379 MAXP61244 160 aa-4.19□□□□□ -3.08
SNORA40.13-201ENST00000516379 BRK1Q8WUW1 75 aa-4.19□□□□□ -3.08
SNORA40.13-201ENST00000516379 AP3S1Q92572 193 aa-4.19□□□□□ -3.08
SNORA40.13-201ENST00000516379 IBTKQ9P2D0 1353 aaPredicted RBP-4.19□□□□□ -3.08
SNORA40.13-201ENST00000516379 A0A087WUJ7 227 aa-4.2□□□□□ -3.08
SNORA40.13-201ENST00000516379 IFNA14P01570 189 aa-4.2□□□□□ -3.08
SNORA40.13-201ENST00000516379 IFNA6P05013 189 aa-4.2□□□□□ -3.08
SNORA40.13-201ENST00000516379 CCDC172P0C7W6 258 aa-4.2□□□□□ -3.08
SNORA40.13-201ENST00000516379 OCM2P0CE71 109 aa-4.2□□□□□ -3.08
SNORA40.13-201ENST00000516379 SLC25A4P12235 298 aa-4.2□□□□□ -3.08
SNORA40.13-201ENST00000516379 IMP3Q9NV31 184 aaKnown RBP-4.2□□□□□ -3.08
SNORA40.13-201ENST00000516379 DMXL2Q8TDJ6 3036 aa-4.2□□□□□ -3.08
SNORA40.13-201ENST00000516379 HMGXB3Q12766 1538 aa-4.21□□□□□ -3.08
SNORA40.13-201ENST00000516379 MRC1P22897 1456 aa-4.21□□□□□ -3.08
SNORA40.13-201ENST00000516379 SYS1-DBNDD2H3BUS1 97 aa-4.21□□□□□ -3.08
SNORA40.13-201ENST00000516379 KPNA4O00629 521 aaPredicted RBP-4.21□□□□□ -3.08
SNORA40.13-201ENST00000516379 BANF1O75531 89 aa-4.21□□□□□ -3.08
SNORA40.13-201ENST00000516379 COX8AP10176 69 aa-4.21□□□□□ -3.08
SNORA40.13-201ENST00000516379 PRELID3AQ96N28 172 aa-4.21□□□□□ -3.08
SNORA40.13-201ENST00000516379 OR2J1Q9GZK6 312 aa-4.21□□□□□ -3.08
SNORA40.13-201ENST00000516379 NAA60Q9H7X0 242 aa-4.21□□□□□ -3.08
SNORA40.13-201ENST00000516379 TCOF1Q13428 1488 aaKnown RBP-4.22□□□□□ -3.08
SNORA40.13-201ENST00000516379 SBF2Q86WG5 1849 aa-4.22□□□□□ -3.08
SNORA40.13-201ENST00000516379 ZNF236Q9UL36 1845 aa-4.22□□□□□ -3.08
SNORA40.13-201ENST00000516379 CPSF4LA6NMK7 179 aaKnown RBP-4.22□□□□□ -3.08
SNORA40.13-201ENST00000516379 SLC25A6P12236 298 aa-4.22□□□□□ -3.08
SNORA40.13-201ENST00000516379 TLN1Q9Y490 2541 aaKnown RBP-4.22□□□□□ -3.09
SNORA40.13-201ENST00000516379 SPTBN5Q9NRC6 3674 aaKnown RBP-4.22□□□□□ -3.09
SNORA40.13-201ENST00000516379 IGHV1-24A0A0C4DH33 117 aa-4.23□□□□□ -3.09
SNORA40.13-201ENST00000516379 SPCS2Q15005 226 aa-4.23□□□□□ -3.09
SNORA40.13-201ENST00000516379 MORN4Q8NDC4 146 aa-4.23□□□□□ -3.09
SNORA40.13-201ENST00000516379 LAMTOR3Q9UHA4 124 aa-4.23□□□□□ -3.09
SNORA40.13-201ENST00000516379 NDUFAF1Q9Y375 327 aa-4.23□□□□□ -3.09
SNORA40.13-201ENST00000516379 CLPSL1A2RUU4 121 aa-4.24□□□□□ -3.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms