RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 RBMY1CP0DJD4 496 aa5.99□□□□□ -1.45
CCL28-204ENST00000514421 NTF3P20783 257 aa5.99□□□□□ -1.45
CCL28-204ENST00000514421 LEPP41159 167 aa5.99□□□□□ -1.45
CCL28-204ENST00000514421 CDKN1BP46527 198 aa5.99□□□□□ -1.45
CCL28-204ENST00000514421 RBMY1FQ15415 496 aaKnown RBP5.99□□□□□ -1.45
CCL28-204ENST00000514421 TDRG1Q3Y452 100 aa5.99□□□□□ -1.45
CCL28-204ENST00000514421 ZFAND6Q6FIF0 208 aa5.99□□□□□ -1.45
CCL28-204ENST00000514421 C11orf45Q8TAV5 145 aa5.99□□□□□ -1.45
CCL28-204ENST00000514421 LINC01587Q99440 93 aa5.99□□□□□ -1.45
CCL28-204ENST00000514421 NIT2Q9NQR4 276 aa5.99□□□□□ -1.45
CCL28-204ENST00000514421 TRAV12-2A0A075B6T6 113 aa5.98□□□□□ -1.45
CCL28-204ENST00000514421 TMSB15BA0A087X1C1 80 aa5.98□□□□□ -1.45
CCL28-204ENST00000514421 LINC01546A6NGU7 62 aa5.98□□□□□ -1.45
CCL28-204ENST00000514421 NXPH4O95158 308 aa5.98□□□□□ -1.45
CCL28-204ENST00000514421 PPBPP02775 128 aa5.98□□□□□ -1.45
CCL28-204ENST00000514421 PMCHP20382 165 aa5.98□□□□□ -1.45
CCL28-204ENST00000514421 CACNG7P62955 275 aa5.98□□□□□ -1.45
CCL28-204ENST00000514421 RRN3P1Q2M238 152 aa5.98□□□□□ -1.45
CCL28-204ENST00000514421 C20orf144Q9BQM9 153 aa5.98□□□□□ -1.45
CCL28-204ENST00000514421 LAMTOR2Q9Y2Q5 125 aa5.98□□□□□ -1.45
CCL28-204ENST00000514421 PRSS47A8MTI9 375 aa5.97□□□□□ -1.45
CCL28-204ENST00000514421 RAB4AP20338 218 aa5.97□□□□□ -1.45
CCL28-204ENST00000514421 IQCJQ1A5X6 159 aa5.97□□□□□ -1.45
CCL28-204ENST00000514421 MRPL51Q4U2R6 128 aaKnown RBP5.97□□□□□ -1.45
CCL28-204ENST00000514421 Q6ZQT7 251 aa5.97□□□□□ -1.45
CCL28-204ENST00000514421 NIT1Q86X76 327 aa5.97□□□□□ -1.45
CCL28-204ENST00000514421 RNF185Q96GF1 192 aa5.97□□□□□ -1.45
CCL28-204ENST00000514421 GSN-AS1Q9NRJ2 163 aa5.97□□□□□ -1.45
CCL28-204ENST00000514421 LINC00614P0C842 121 aa5.96□□□□□ -1.46
CCL28-204ENST00000514421 SPART-AS1P0CW21 52 aa5.96□□□□□ -1.46
CCL28-204ENST00000514421 EMP1P54849 157 aa5.96□□□□□ -1.46
CCL28-204ENST00000514421 NANOS2P60321 138 aaKnown RBP5.96□□□□□ -1.46
CCL28-204ENST00000514421 KIR3DS1Q14943 382 aa5.96□□□□□ -1.46
CCL28-204ENST00000514421 TWIST1Q15672 202 aa5.96□□□□□ -1.46
CCL28-204ENST00000514421 CDPF1Q6NVV7 123 aa5.96□□□□□ -1.46
CCL28-204ENST00000514421 CEMP1Q6PRD7 247 aaPredicted RBP5.96□□□□□ -1.46
CCL28-204ENST00000514421 AMN1Q8IY45 258 aa5.96□□□□□ -1.46
CCL28-204ENST00000514421 ORMDL3Q8N138 153 aa5.96□□□□□ -1.46
CCL28-204ENST00000514421 POM121L12Q8N7R1 296 aa5.96□□□□□ -1.46
CCL28-204ENST00000514421 TPPP3Q9BW30 176 aa5.96□□□□□ -1.46
CCL28-204ENST00000514421 SAMD10Q9BYL1 202 aa5.96□□□□□ -1.46
CCL28-204ENST00000514421 MSRB1Q9NZV6 116 aa5.96□□□□□ -1.46
CCL28-204ENST00000514421 C7orf71A4D174 169 aa5.95□□□□□ -1.46
CCL28-204ENST00000514421 J3KRW8 73 aa5.95□□□□□ -1.46
CCL28-204ENST00000514421 PRM2P04554 102 aa5.95□□□□□ -1.46
CCL28-204ENST00000514421 RNASE3P12724 160 aaKnown RBP5.95□□□□□ -1.46
CCL28-204ENST00000514421 AZU1P20160 251 aa5.95□□□□□ -1.46
CCL28-204ENST00000514421 RNASE4P34096 147 aaKnown RBP5.95□□□□□ -1.46
CCL28-204ENST00000514421 ASIPP42127 132 aa5.95□□□□□ -1.46
CCL28-204ENST00000514421 AMTP48728 403 aa5.95□□□□□ -1.46
CCL28-204ENST00000514421 ANXA2RQ3ZCQ2 193 aa5.95□□□□□ -1.46
CCL28-204ENST00000514421 TEX43Q6ZNM6 134 aa5.95□□□□□ -1.46
CCL28-204ENST00000514421 Q8N976 141 aa5.95□□□□□ -1.46
CCL28-204ENST00000514421 OR10AG1Q8NH19 301 aa5.95□□□□□ -1.46
CCL28-204ENST00000514421 PHLDA1Q8WV24 401 aaPredicted RBP5.95□□□□□ -1.46
CCL28-204ENST00000514421 KLK5Q9Y337 293 aaPredicted RBP5.95□□□□□ -1.46
CCL28-204ENST00000514421 MUC4Q99102 2169 aa5.94□□□□□ -1.46
CCL28-204ENST00000514421 DYNC2H1Q8NCM8 4307 aaKnown RBP5.94□□□□□ -1.46
CCL28-204ENST00000514421 TRAV12-3A0A0B4J271 114 aa5.94□□□□□ -1.46
CCL28-204ENST00000514421 IGHV1-24A0A0C4DH33 117 aa5.94□□□□□ -1.46
CCL28-204ENST00000514421 TEX48A0A1B0GUV7 120 aa5.94□□□□□ -1.46
CCL28-204ENST00000514421 NUPR2A6NF83 97 aa5.94□□□□□ -1.46
CCL28-204ENST00000514421 D6R8Y8 96 aa5.94□□□□□ -1.46
CCL28-204ENST00000514421 HSBP1O75506 76 aa5.94□□□□□ -1.46
CCL28-204ENST00000514421 HTN1P15515 57 aa5.94□□□□□ -1.46
CCL28-204ENST00000514421 C12orf74Q32Q52 190 aa5.94□□□□□ -1.46
CCL28-204ENST00000514421 PRELID3AQ96N28 172 aa5.94□□□□□ -1.46
CCL28-204ENST00000514421 LINC00467Q9BRT7 94 aa5.94□□□□□ -1.46
CCL28-204ENST00000514421 DKK2Q9UBU2 259 aa5.94□□□□□ -1.46
CCL28-204ENST00000514421 NAGKQ9UJ70 344 aa5.94□□□□□ -1.46
CCL28-204ENST00000514421 PLECQ15149 4684 aaKnown RBP5.94□□□□□ -1.46
CCL28-204ENST00000514421 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.93□□□□□ -1.46
CCL28-204ENST00000514421 H3BVH4 76 aa5.93□□□□□ -1.46
CCL28-204ENST00000514421 C3orf79P0CE67 100 aa5.93□□□□□ -1.46
CCL28-204ENST00000514421 CKS2P33552 79 aa5.93□□□□□ -1.46
CCL28-204ENST00000514421 PKIAP61925 76 aa5.93□□□□□ -1.46
CCL28-204ENST00000514421 PIK3CD-AS1Q5SR53 167 aa5.93□□□□□ -1.46
CCL28-204ENST00000514421 FAM222AQ5U5X8 452 aa5.93□□□□□ -1.46
CCL28-204ENST00000514421 RNASEKQ6P5S7 137 aaKnown RBP5.93□□□□□ -1.46
CCL28-204ENST00000514421 FAM19A2Q8N3H0 131 aa5.93□□□□□ -1.46
CCL28-204ENST00000514421 MRAP2Q96G30 205 aa5.93□□□□□ -1.46
CCL28-204ENST00000514421 C16orf74Q96GX8 76 aa5.93□□□□□ -1.46
CCL28-204ENST00000514421 C9orf85Q96MD7 179 aa5.93□□□□□ -1.46
CCL28-204ENST00000514421 KRTAP9-2Q9BYQ4 174 aa5.93□□□□□ -1.46
CCL28-204ENST00000514421 AP5S1Q9NUS5 200 aa5.93□□□□□ -1.46
CCL28-204ENST00000514421 CELA1Q9UNI1 258 aa5.93□□□□□ -1.46
CCL28-204ENST00000514421 KIF25-AS1Q9Y6Z4 181 aa5.93□□□□□ -1.46
CCL28-204ENST00000514421 STARD9Q9P2P6 4700 aa5.93□□□□□ -1.46
CCL28-204ENST00000514421 TENM2Q9NT68 2774 aa5.92□□□□□ -1.46
CCL28-204ENST00000514421 IGLV2-18A0A075B6J9 118 aa5.92□□□□□ -1.46
CCL28-204ENST00000514421 A0A096LNJ9 63 aa5.92□□□□□ -1.46
CCL28-204ENST00000514421 TRAV10A0A0B4J240 114 aa5.92□□□□□ -1.46
CCL28-204ENST00000514421 IGHV3-16A0A0C4DH30 117 aa5.92□□□□□ -1.46
CCL28-204ENST00000514421 MUC21A0A0G2JKD1 596 aa5.92□□□□□ -1.46
CCL28-204ENST00000514421 MUC21A0A140T8X8 626 aa5.92□□□□□ -1.46
CCL28-204ENST00000514421 LYRM9A8MSI8 78 aa5.92□□□□□ -1.46
CCL28-204ENST00000514421 M0R381 172 aa5.92□□□□□ -1.46
CCL28-204ENST00000514421 GNRH2O43555 120 aa5.92□□□□□ -1.46
CCL28-204ENST00000514421 NPYP01303 97 aa5.92□□□□□ -1.46
CCL28-204ENST00000514421 EVI2AP22794 236 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms