RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 CNTFRP26992 372 aa5.57□□□□□ -1.52
CLIP1-205ENST00000514271 ERCC8Q13216 396 aa5.57□□□□□ -1.52
CLIP1-205ENST00000514271 TOMM6Q96B49 74 aa5.57□□□□□ -1.52
CLIP1-205ENST00000514271 TRAV8-2A0A0B4J237 113 aa5.57□□□□□ -1.52
CLIP1-205ENST00000514271 IGHV4-59P01825 116 aa5.57□□□□□ -1.52
CLIP1-205ENST00000514271 IGHG2P01859 326 aa5.57□□□□□ -1.52
CLIP1-205ENST00000514271 ADGRG4Q8IZF6 3080 aa5.56□□□□□ -1.52
CLIP1-205ENST00000514271 SMIM13P0DJ93 91 aa5.56□□□□□ -1.52
CLIP1-205ENST00000514271 XGP55808 180 aa5.56□□□□□ -1.52
CLIP1-205ENST00000514271 ERHP84090 104 aaKnown RBP5.56□□□□□ -1.52
CLIP1-205ENST00000514271 Q6Q795 121 aa5.56□□□□□ -1.52
CLIP1-205ENST00000514271 C5orf56Q8N8D9 126 aa5.56□□□□□ -1.52
CLIP1-205ENST00000514271 PRELID3AQ96N28 172 aa5.56□□□□□ -1.52
CLIP1-205ENST00000514271 SPG11Q96JI7 2443 aa5.56□□□□□ -1.52
CLIP1-205ENST00000514271 GPHB5Q86YW7 130 aa5.56□□□□□ -1.52
CLIP1-205ENST00000514271 DNAJC30Q96LL9 226 aa5.56□□□□□ -1.52
CLIP1-205ENST00000514271 SERTAD4Q9NUC0 356 aa5.56□□□□□ -1.52
CLIP1-205ENST00000514271 HILPDAQ9Y5L2 63 aa5.56□□□□□ -1.52
CLIP1-205ENST00000514271 ABCA1O95477 2261 aa5.56□□□□□ -1.52
CLIP1-205ENST00000514271 SOCS3O14543 225 aa5.55□□□□□ -1.52
CLIP1-205ENST00000514271 OXTP01178 125 aa5.55□□□□□ -1.52
CLIP1-205ENST00000514271 IGF1P05019 195 aa5.55□□□□□ -1.52
CLIP1-205ENST00000514271 LGALS1P09382 135 aaKnown RBP5.55□□□□□ -1.52
CLIP1-205ENST00000514271 TTTY13Q9BZ97 58 aa5.55□□□□□ -1.52
CLIP1-205ENST00000514271 HIGD1AQ9Y241 93 aa5.55□□□□□ -1.52
CLIP1-205ENST00000514271 AGRNO00468 2067 aa5.55□□□□□ -1.52
CLIP1-205ENST00000514271 HIVEP2P31629 2446 aa5.55□□□□□ -1.52
CLIP1-205ENST00000514271 IGHV3OR16-10A0A075B7F0 116 aa5.55□□□□□ -1.52
CLIP1-205ENST00000514271 TCTAP57738 103 aa5.55□□□□□ -1.52
CLIP1-205ENST00000514271 HES1Q14469 280 aa5.55□□□□□ -1.52
CLIP1-205ENST00000514271 C8orf86Q6ZUL3 223 aa5.55□□□□□ -1.52
CLIP1-205ENST00000514271 ESM1Q9NQ30 184 aa5.55□□□□□ -1.52
CLIP1-205ENST00000514271 OTOGQ6ZRI0 2925 aa5.55□□□□□ -1.52
CLIP1-205ENST00000514271 H3BS24 57 aa5.55□□□□□ -1.52
CLIP1-205ENST00000514271 ELANEP08246 267 aa5.55□□□□□ -1.52
CLIP1-205ENST00000514271 Q6ZUT4 128 aa5.55□□□□□ -1.52
CLIP1-205ENST00000514271 ARPC1AQ92747 370 aa5.55□□□□□ -1.52
CLIP1-205ENST00000514271 GCSHP23434 173 aa5.54□□□□□ -1.52
CLIP1-205ENST00000514271 PRIMA1Q86XR5 153 aa5.54□□□□□ -1.52
CLIP1-205ENST00000514271 DYNAPQ8N1N2 210 aa5.54□□□□□ -1.52
CLIP1-205ENST00000514271 RASL10AQ92737 203 aa5.54□□□□□ -1.52
CLIP1-205ENST00000514271 SGK494Q96LW2 274 aa5.54□□□□□ -1.52
CLIP1-205ENST00000514271 LITAFQ99732 161 aa5.54□□□□□ -1.52
CLIP1-205ENST00000514271 ZNF702PQ9H963 129 aa5.54□□□□□ -1.52
CLIP1-205ENST00000514271 MSRB1Q9NZV6 116 aa5.54□□□□□ -1.52
CLIP1-205ENST00000514271 FLNBO75369 2602 aaKnown RBP5.54□□□□□ -1.52
CLIP1-205ENST00000514271 SPRY2O43597 315 aa5.54□□□□□ -1.52
CLIP1-205ENST00000514271 IGKCP01834 107 aa5.54□□□□□ -1.52
CLIP1-205ENST00000514271 RPL35AP18077 110 aaKnown RBP5.54□□□□□ -1.52
CLIP1-205ENST00000514271 RPL13AP40429 203 aaKnown RBP5.54□□□□□ -1.52
CLIP1-205ENST00000514271 GOLT1AQ6ZVE7 132 aa5.54□□□□□ -1.52
CLIP1-205ENST00000514271 FAM19A1Q7Z5A9 133 aa5.54□□□□□ -1.52
CLIP1-205ENST00000514271 Q8N9W7 124 aa5.54□□□□□ -1.52
CLIP1-205ENST00000514271 SRSF12Q8WXF0 261 aaKnown RBP5.54□□□□□ -1.52
CLIP1-205ENST00000514271 EDA2RQ9HAV5 297 aa5.54□□□□□ -1.52
CLIP1-205ENST00000514271 NXT2Q9NPJ8 142 aaKnown RBP5.54□□□□□ -1.52
CLIP1-205ENST00000514271 ARHGAP32A7KAX9 2087 aa5.54□□□□□ -1.52
CLIP1-205ENST00000514271 LOC100996750A0A140TA64 210 aa5.54□□□□□ -1.52
CLIP1-205ENST00000514271 ATP5LO75964 103 aa5.54□□□□□ -1.52
CLIP1-205ENST00000514271 FABP2P12104 132 aa5.54□□□□□ -1.52
CLIP1-205ENST00000514271 Q6ZSV7 163 aa5.54□□□□□ -1.52
CLIP1-205ENST00000514271 KRTAP4-6Q9BYQ5 205 aa5.54□□□□□ -1.52
CLIP1-205ENST00000514271 MUC4Q99102 2169 aa5.53□□□□□ -1.52
CLIP1-205ENST00000514271 IGIPA6NJ69 53 aa5.53□□□□□ -1.52
CLIP1-205ENST00000514271 FABP5P3A8MUU1 101 aa5.53□□□□□ -1.52
CLIP1-205ENST00000514271 IGHV3-30P01768 117 aa5.53□□□□□ -1.52
CLIP1-205ENST00000514271 CSN3P07498 182 aa5.53□□□□□ -1.52
CLIP1-205ENST00000514271 IGHV3-30-5P0DP03 117 aa5.53□□□□□ -1.52
CLIP1-205ENST00000514271 MED14OSP0DP75 135 aa5.53□□□□□ -1.52
CLIP1-205ENST00000514271 SUB1P53999 127 aaKnown RBP eCLIP5.53□□□□□ -1.52
CLIP1-205ENST00000514271 NDUFA11Q86Y39 141 aa5.53□□□□□ -1.52
CLIP1-205ENST00000514271 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.53□□□□□ -1.52
CLIP1-205ENST00000514271 TMEM126AQ9H061 195 aa5.53□□□□□ -1.52
CLIP1-205ENST00000514271 FLNAP21333 2647 aaKnown RBP5.53□□□□□ -1.52
CLIP1-205ENST00000514271 PROK1P58294 105 aa5.53□□□□□ -1.52
CLIP1-205ENST00000514271 KRTAP24-1Q3LI83 254 aa5.53□□□□□ -1.52
CLIP1-205ENST00000514271 LCE2AQ5TA79 106 aaPredicted RBP5.53□□□□□ -1.52
CLIP1-205ENST00000514271 C9orf47Q6ZRZ4 202 aa5.53□□□□□ -1.52
CLIP1-205ENST00000514271 OR13C6PQ8NH95 151 aa5.53□□□□□ -1.52
CLIP1-205ENST00000514271 C20orf78Q9BR46 151 aa5.53□□□□□ -1.52
CLIP1-205ENST00000514271 A0A0J9YX75 114 aa5.53□□□□□ -1.52
CLIP1-205ENST00000514271 SH2D6Q7Z4S9 175 aa5.53□□□□□ -1.52
CLIP1-205ENST00000514271 PPP1R27Q86WC6 154 aa5.53□□□□□ -1.52
CLIP1-205ENST00000514271 NAA38Q9BRA0 125 aaKnown RBP5.53□□□□□ -1.52
CLIP1-205ENST00000514271 PRO0628Q9UI54 55 aa5.53□□□□□ -1.52
CLIP1-205ENST00000514271 C22orf24Q9Y442 160 aa5.53□□□□□ -1.52
CLIP1-205ENST00000514271 F8P00451 2351 aa5.53□□□□□ -1.52
CLIP1-205ENST00000514271 CENPEQ02224 2701 aa5.52□□□□□ -1.53
CLIP1-205ENST00000514271 M0R381 172 aa5.52□□□□□ -1.53
CLIP1-205ENST00000514271 LINC00477Q96M19 166 aa5.52□□□□□ -1.53
CLIP1-205ENST00000514271 IGHV4OR15-8A0A075B7B6 117 aa5.52□□□□□ -1.53
CLIP1-205ENST00000514271 A0A087WW49 117 aa5.52□□□□□ -1.53
CLIP1-205ENST00000514271 CHEK1O14757 476 aa5.52□□□□□ -1.53
CLIP1-205ENST00000514271 CTSGP08311 255 aa5.52□□□□□ -1.53
CLIP1-205ENST00000514271 PLNP26678 52 aa5.52□□□□□ -1.53
CLIP1-205ENST00000514271 PLGLAQ15195 96 aa5.52□□□□□ -1.53
CLIP1-205ENST00000514271 PRNTQ86SH4 94 aa5.52□□□□□ -1.53
CLIP1-205ENST00000514271 LINC01006Q8NI28 216 aa5.52□□□□□ -1.53
CLIP1-205ENST00000514271 POLQO75417 2590 aa5.52□□□□□ -1.53
CLIP1-205ENST00000514271 RHODO00212 210 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms