RNA–Protein interactions for RNA: ENST00000514133.1

SGCB-203, Transcript of sarcoglycan beta, humanhuman

TSL 5

Gene SGCB, Length 599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-203ENST00000514133 CCDC179H3BU77 68 aa1.33□□□□□ -2.2
SGCB-203ENST00000514133 DLEU1O43261 78 aa1.33□□□□□ -2.2
SGCB-203ENST00000514133 PIRTP0C851 137 aa1.33□□□□□ -2.2
SGCB-203ENST00000514133 SPANXN1Q5VSR9 72 aa1.33□□□□□ -2.2
SGCB-203ENST00000514133 TMEM242Q9NWH2 141 aa1.33□□□□□ -2.2
SGCB-203ENST00000514133 NDUFA12Q9UI09 145 aa1.33□□□□□ -2.2
SGCB-203ENST00000514133 PTPN13Q12923 2485 aa1.33□□□□□ -2.2
SGCB-203ENST00000514133 PARP14Q460N5 1801 aa1.33□□□□□ -2.2
SGCB-203ENST00000514133 ZFHX4Q86UP3 3567 aa1.33□□□□□ -2.2
SGCB-203ENST00000514133 LAMB1P07942 1786 aa1.32□□□□□ -2.2
SGCB-203ENST00000514133 COL6A5A8TX70 2615 aa1.32□□□□□ -2.2
SGCB-203ENST00000514133 TRAV12-2A0A075B6T6 113 aa1.32□□□□□ -2.2
SGCB-203ENST00000514133 APOC1P02654 83 aa1.32□□□□□ -2.2
SGCB-203ENST00000514133 HIST1H1DP16402 221 aaKnown RBP1.32□□□□□ -2.2
SGCB-203ENST00000514133 KRTAP21-2Q3LI59 83 aa1.32□□□□□ -2.2
SGCB-203ENST00000514133 MEIG1Q5JSS6 88 aa1.32□□□□□ -2.2
SGCB-203ENST00000514133 OR2T2Q6IF00 324 aa1.32□□□□□ -2.2
SGCB-203ENST00000514133 SPTSSAQ969W0 71 aa1.32□□□□□ -2.2
SGCB-203ENST00000514133 ROS1P08922 2347 aa1.32□□□□□ -2.2
SGCB-203ENST00000514133 NAIPQ13075 1403 aa1.32□□□□□ -2.2
SGCB-203ENST00000514133 PTPRMP28827 1452 aa1.31□□□□□ -2.2
SGCB-203ENST00000514133 MBD5Q9P267 1494 aa1.31□□□□□ -2.2
SGCB-203ENST00000514133 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.31□□□□□ -2.2
SGCB-203ENST00000514133 LINC00587B1AMM8 73 aa1.31□□□□□ -2.2
SGCB-203ENST00000514133 SNCGO76070 127 aa1.31□□□□□ -2.2
SGCB-203ENST00000514133 APODP05090 189 aa1.31□□□□□ -2.2
SGCB-203ENST00000514133 PIPP12273 146 aaPredicted RBP1.31□□□□□ -2.2
SGCB-203ENST00000514133 FXYD3Q14802 87 aa1.31□□□□□ -2.2
SGCB-203ENST00000514133 XAF1Q6GPH4 301 aa1.31□□□□□ -2.2
SGCB-203ENST00000514133 LINC00575Q6W349 94 aa1.31□□□□□ -2.2
SGCB-203ENST00000514133 CCL19Q99731 98 aa1.31□□□□□ -2.2
SGCB-203ENST00000514133 SEC11CQ9BY50 192 aa1.31□□□□□ -2.2
SGCB-203ENST00000514133 ESPL1Q14674 2120 aa1.31□□□□□ -2.2
SGCB-203ENST00000514133 WDR7Q9Y4E6 1490 aa1.31□□□□□ -2.2
SGCB-203ENST00000514133 FASNP49327 2511 aaKnown RBP1.3□□□□□ -2.2
SGCB-203ENST00000514133 CFAP43Q8NDM7 1665 aa1.3□□□□□ -2.2
SGCB-203ENST00000514133 ZNF292O60281 2723 aa1.3□□□□□ -2.2
SGCB-203ENST00000514133 TRBV30A0A0K0K1B3 111 aa1.3□□□□□ -2.2
SGCB-203ENST00000514133 ARL14EPLP0DKL9 152 aa1.3□□□□□ -2.2
SGCB-203ENST00000514133 RPL7L1Q6DKI1 246 aaKnown RBP1.3□□□□□ -2.2
SGCB-203ENST00000514133 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.3□□□□□ -2.2
SGCB-203ENST00000514133 COPS9Q8WXC6 57 aa1.3□□□□□ -2.2
SGCB-203ENST00000514133 IFI27L1Q96BM0 104 aa1.3□□□□□ -2.2
SGCB-203ENST00000514133 LAMA4Q16363 1823 aa1.3□□□□□ -2.2
SGCB-203ENST00000514133 MUC6Q6W4X9 2439 aa1.3□□□□□ -2.2
SGCB-203ENST00000514133 EIF4G3O43432 1585 aaKnown RBP1.3□□□□□ -2.2
SGCB-203ENST00000514133 CUL7Q14999 1698 aa1.29□□□□□ -2.2
SGCB-203ENST00000514133 ABCA12Q86UK0 2595 aa1.29□□□□□ -2.2
SGCB-203ENST00000514133 PLXNA1Q9UIW2 1896 aa1.29□□□□□ -2.2
SGCB-203ENST00000514133 MYH8P13535 1937 aa1.29□□□□□ -2.2
SGCB-203ENST00000514133 NBDYA0A0U1RRE5 68 aa1.29□□□□□ -2.2
SGCB-203ENST00000514133 LOC100130705A0A1B0GUX0 176 aa1.29□□□□□ -2.2
SGCB-203ENST00000514133 TCRBV3S1A0A5B6 114 aa1.29□□□□□ -2.2
SGCB-203ENST00000514133 A6NIN4 97 aa1.29□□□□□ -2.2
SGCB-203ENST00000514133 FXYD1O00168 92 aa1.29□□□□□ -2.2
SGCB-203ENST00000514133 NDUFB6O95139 128 aa1.29□□□□□ -2.2
SGCB-203ENST00000514133 CAV3P56539 151 aa1.29□□□□□ -2.2
SGCB-203ENST00000514133 S100A7L2Q5SY68 101 aa1.29□□□□□ -2.2
SGCB-203ENST00000514133 SLC48A1Q6P1K1 146 aa1.29□□□□□ -2.2
SGCB-203ENST00000514133 TMEM141Q96I45 108 aa1.29□□□□□ -2.2
SGCB-203ENST00000514133 LINC00208Q96KT6 92 aa1.29□□□□□ -2.2
SGCB-203ENST00000514133 SPAG17Q6Q759 2223 aa1.29□□□□□ -2.2
SGCB-203ENST00000514133 ARFGEF1Q9Y6D6 1849 aa1.29□□□□□ -2.2
SGCB-203ENST00000514133 MED12Q93074 2177 aa1.28□□□□□ -2.2
SGCB-203ENST00000514133 CYP2G1PQ6ZSU1 146 aa1.28□□□□□ -2.2
SGCB-203ENST00000514133 NDUFA11Q86Y39 141 aa1.28□□□□□ -2.2
SGCB-203ENST00000514133 C5orf56Q8N8D9 126 aa1.28□□□□□ -2.2
SGCB-203ENST00000514133 TSKUQ8WUA8 353 aa1.28□□□□□ -2.2
SGCB-203ENST00000514133 C2orf88Q9BSF0 95 aa1.28□□□□□ -2.2
SGCB-203ENST00000514133 SNRNP25Q9BV90 132 aaKnown RBP1.28□□□□□ -2.2
SGCB-203ENST00000514133 RERGLQ9H628 205 aa1.28□□□□□ -2.2
SGCB-203ENST00000514133 THOC2Q8NI27 1593 aaKnown RBP1.28□□□□□ -2.2
SGCB-203ENST00000514133 RB1CC1Q8TDY2 1594 aa1.28□□□□□ -2.2
SGCB-203ENST00000514133 PCLOQ9Y6V0 5065 aa1.28□□□□□ -2.2
SGCB-203ENST00000514133 NRXN2Q9P2S2 1712 aa1.28□□□□□ -2.2
SGCB-203ENST00000514133 PHIPQ8WWQ0 1821 aa1.27□□□□□ -2.21
SGCB-203ENST00000514133 RBBP6Q7Z6E9 1792 aaKnown RBP1.27□□□□□ -2.21
SGCB-203ENST00000514133 NWD2Q9ULI1 1742 aa1.27□□□□□ -2.21
SGCB-203ENST00000514133 CFTRP13569 1480 aa1.27□□□□□ -2.21
SGCB-203ENST00000514133 TRAV12-3A0A0B4J271 114 aa1.27□□□□□ -2.21
SGCB-203ENST00000514133 FGF7P21781 194 aa1.27□□□□□ -2.21
SGCB-203ENST00000514133 UBE2G1P62253 170 aa1.27□□□□□ -2.21
SGCB-203ENST00000514133 Q6ZS92 163 aa1.27□□□□□ -2.21
SGCB-203ENST00000514133 DEFB132Q7Z7B7 95 aa1.27□□□□□ -2.21
SGCB-203ENST00000514133 AGPAT4-IT1Q9H0P7 198 aa1.27□□□□□ -2.21
SGCB-203ENST00000514133 EYSQ5T1H1 3165 aa1.27□□□□□ -2.21
SGCB-203ENST00000514133 VWFP04275 2813 aa1.27□□□□□ -2.21
SGCB-203ENST00000514133 CNTRLQ7Z7A1 2325 aa1.27□□□□□ -2.21
SGCB-203ENST00000514133 VCANP13611 3396 aa1.26□□□□□ -2.21
SGCB-203ENST00000514133 DAPK1P53355 1430 aa1.26□□□□□ -2.21
SGCB-203ENST00000514133 SMG6Q86US8 1419 aaKnown RBP1.26□□□□□ -2.21
SGCB-203ENST00000514133 TEX49A0A1B0GTD5 131 aa1.26□□□□□ -2.21
SGCB-203ENST00000514133 SPAARA0A1B0GVQ0 90 aa1.26□□□□□ -2.21
SGCB-203ENST00000514133 AKAIN1P0CW23 69 aa1.26□□□□□ -2.21
SGCB-203ENST00000514133 KRTAP10-4P60372 401 aaPredicted RBP1.26□□□□□ -2.21
SGCB-203ENST00000514133 ZNF56Q15929 161 aa1.26□□□□□ -2.21
SGCB-203ENST00000514133 C9orf116Q5BN46 136 aaPredicted RBP1.26□□□□□ -2.21
SGCB-203ENST00000514133 NAA60Q9H7X0 242 aa1.26□□□□□ -2.21
SGCB-203ENST00000514133 RPRMQ9NS64 109 aa1.26□□□□□ -2.21
SGCB-203ENST00000514133 C2CD3Q4AC94 2353 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms