RNA–Protein interactions for RNA: ENST00000513819.1

NIPBL-207, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 452 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-207ENST00000513819 FAM223AQ8IWN6 122 aa2.78□□□□□ -1.96
NIPBL-207ENST00000513819 DIRC1Q969H9 104 aa2.78□□□□□ -1.96
NIPBL-207ENST00000513819 FAM104AQ969W3 186 aa2.78□□□□□ -1.96
NIPBL-207ENST00000513819 DYNLRB1Q9NP97 96 aa2.78□□□□□ -1.96
NIPBL-207ENST00000513819 PIKFYVEQ9Y2I7 2098 aa2.78□□□□□ -1.96
NIPBL-207ENST00000513819 DOCK6Q96HP0 2047 aa2.78□□□□□ -1.96
NIPBL-207ENST00000513819 SCN10AQ9Y5Y9 1956 aa2.78□□□□□ -1.97
NIPBL-207ENST00000513819 ZNF236Q9UL36 1845 aa2.77□□□□□ -1.97
NIPBL-207ENST00000513819 IGKV1-9A0A0C4DH69 117 aa2.77□□□□□ -1.97
NIPBL-207ENST00000513819 LOC389332A0A1B0GUA5 103 aa2.77□□□□□ -1.97
NIPBL-207ENST00000513819 LINC01549A6NIU2 74 aa2.77□□□□□ -1.97
NIPBL-207ENST00000513819 A6NN06 94 aa2.77□□□□□ -1.97
NIPBL-207ENST00000513819 E7EQL1 145 aa2.77□□□□□ -1.97
NIPBL-207ENST00000513819 BUB1B-PAK6H3BSN5 160 aa2.77□□□□□ -1.97
NIPBL-207ENST00000513819 ZNF22P17026 224 aaPredicted RBP2.77□□□□□ -1.97
NIPBL-207ENST00000513819 KLKP1Q107X0 134 aa2.77□□□□□ -1.97
NIPBL-207ENST00000513819 ATXN8Q156A1 80 aa2.77□□□□□ -1.97
NIPBL-207ENST00000513819 Q1T7F1 81 aa2.77□□□□□ -1.97
NIPBL-207ENST00000513819 PRNTQ86SH4 94 aa2.77□□□□□ -1.97
NIPBL-207ENST00000513819 GPHB5Q86YW7 130 aa2.77□□□□□ -1.97
NIPBL-207ENST00000513819 CLECL1Q8IZS7 167 aa2.77□□□□□ -1.97
NIPBL-207ENST00000513819 RPRMLQ8N4K4 120 aa2.77□□□□□ -1.97
NIPBL-207ENST00000513819 SLC25A29Q8N8R3 303 aa2.77□□□□□ -1.97
NIPBL-207ENST00000513819 Q8N9L7 120 aa2.77□□□□□ -1.97
NIPBL-207ENST00000513819 SMCR5Q8TEV8 140 aa2.77□□□□□ -1.97
NIPBL-207ENST00000513819 SPTSSAQ969W0 71 aa2.77□□□□□ -1.97
NIPBL-207ENST00000513819 ZNF714Q96N38 554 aa2.77□□□□□ -1.97
NIPBL-207ENST00000513819 PROK2Q9HC23 129 aa2.77□□□□□ -1.97
NIPBL-207ENST00000513819 MIA3Q5JRA6 1907 aa2.77□□□□□ -1.97
NIPBL-207ENST00000513819 DLG5Q8TDM6 1919 aa2.76□□□□□ -1.97
NIPBL-207ENST00000513819 IGKV1D-17A0A075B6S4 117 aa2.76□□□□□ -1.97
NIPBL-207ENST00000513819 TRAV13-2A0A0B4J235 113 aa2.76□□□□□ -1.97
NIPBL-207ENST00000513819 TRAV3A0A0B4J244 114 aa2.76□□□□□ -1.97
NIPBL-207ENST00000513819 IGHV1OR15-9A0A0B4J2B8 117 aa2.76□□□□□ -1.97
NIPBL-207ENST00000513819 FAM223BA6NKX1 122 aa2.76□□□□□ -1.97
NIPBL-207ENST00000513819 IQCF6A8MYZ5 107 aa2.76□□□□□ -1.97
NIPBL-207ENST00000513819 IGKV1D-33P01593 117 aa2.76□□□□□ -1.97
NIPBL-207ENST00000513819 IGKV1-33P01594 117 aa2.76□□□□□ -1.97
NIPBL-207ENST00000513819 TRBV12-3P01733 135 aa2.76□□□□□ -1.97
NIPBL-207ENST00000513819 CKS2P33552 79 aa2.76□□□□□ -1.97
NIPBL-207ENST00000513819 RNASE4P34096 147 aaKnown RBP2.76□□□□□ -1.97
NIPBL-207ENST00000513819 ZNF138P52744 262 aa2.76□□□□□ -1.97
NIPBL-207ENST00000513819 RBM3P98179 157 aaKnown RBP2.76□□□□□ -1.97
NIPBL-207ENST00000513819 RHOHQ15669 191 aa2.76□□□□□ -1.97
NIPBL-207ENST00000513819 Q6JHZ5 121 aa2.76□□□□□ -1.97
NIPBL-207ENST00000513819 SLC48A1Q6P1K1 146 aa2.76□□□□□ -1.97
NIPBL-207ENST00000513819 DAND5Q8N907 189 aa2.76□□□□□ -1.97
NIPBL-207ENST00000513819 ZNF414Q96IQ9 312 aa2.76□□□□□ -1.97
NIPBL-207ENST00000513819 TAS2R4Q9NYW5 299 aa2.76□□□□□ -1.97
NIPBL-207ENST00000513819 MRPL35Q9NZE8 188 aaKnown RBP2.76□□□□□ -1.97
NIPBL-207ENST00000513819 NACAE9PAV3 2078 aa2.76□□□□□ -1.97
NIPBL-207ENST00000513819 MCM3APO60318 1980 aa2.76□□□□□ -1.97
NIPBL-207ENST00000513819 THSD7AQ9UPZ6 1657 aa2.76□□□□□ -1.97
NIPBL-207ENST00000513819 LRP4O75096 1905 aa2.76□□□□□ -1.97
NIPBL-207ENST00000513819 SIP14410 1827 aa2.75□□□□□ -1.97
NIPBL-207ENST00000513819 TET2Q6N021 2002 aaPredicted RBP2.75□□□□□ -1.97
NIPBL-207ENST00000513819 CASP8AP2Q9UKL3 1982 aa2.75□□□□□ -1.97
NIPBL-207ENST00000513819 IGKV2D-26A0A0A0MRZ7 120 aa2.75□□□□□ -1.97
NIPBL-207ENST00000513819 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.75□□□□□ -1.97
NIPBL-207ENST00000513819 IGLV3-27P01718 113 aa2.75□□□□□ -1.97
NIPBL-207ENST00000513819 TLX1NBP0CAT3 122 aa2.75□□□□□ -1.97
NIPBL-207ENST00000513819 CCL4P13236 92 aa2.75□□□□□ -1.97
NIPBL-207ENST00000513819 IFI27P40305 119 aaPredicted RBP2.75□□□□□ -1.97
NIPBL-207ENST00000513819 BLCAPP62952 87 aa2.75□□□□□ -1.97
NIPBL-207ENST00000513819 CIRBPQ14011 172 aaKnown RBP2.75□□□□□ -1.97
NIPBL-207ENST00000513819 RBMY1FQ15415 496 aaKnown RBP2.75□□□□□ -1.97
NIPBL-207ENST00000513819 FBXL19-AS1Q494R0 122 aa2.75□□□□□ -1.97
NIPBL-207ENST00000513819 LINC01554Q52M75 96 aa2.75□□□□□ -1.97
NIPBL-207ENST00000513819 CLLU1OSQ5K130 101 aa2.75□□□□□ -1.97
NIPBL-207ENST00000513819 GUSBP11Q6P575 273 aa2.75□□□□□ -1.97
NIPBL-207ENST00000513819 C2orf82Q6UX34 121 aa2.75□□□□□ -1.97
NIPBL-207ENST00000513819 ATP11AUNQ6ZP68 121 aa2.75□□□□□ -1.97
NIPBL-207ENST00000513819 LYPD6Q86Y78 171 aa2.75□□□□□ -1.97
NIPBL-207ENST00000513819 WFDC5Q8TCV5 224 aa2.75□□□□□ -1.97
NIPBL-207ENST00000513819 VWA8A3KMH1 1905 aa2.75□□□□□ -1.97
NIPBL-207ENST00000513819 PAPPA2Q9BXP8 1791 aa2.74□□□□□ -1.97
NIPBL-207ENST00000513819 IGLV4-69A0A075B6H9 119 aa2.74□□□□□ -1.97
NIPBL-207ENST00000513819 IGHV3-66A0A0C4DH42 116 aa2.74□□□□□ -1.97
NIPBL-207ENST00000513819 PSPHP1O15172 72 aa2.74□□□□□ -1.97
NIPBL-207ENST00000513819 IL9P15248 144 aa2.74□□□□□ -1.97
NIPBL-207ENST00000513819 FUSP35637 526 aaKnown RBP eCLIP2.74□□□□□ -1.97
NIPBL-207ENST00000513819 ESRGQ1W209 222 aa2.74□□□□□ -1.97
NIPBL-207ENST00000513819 C6orf99Q4VX62 202 aa2.74□□□□□ -1.97
NIPBL-207ENST00000513819 LYZL2Q7Z4W2 148 aa2.74□□□□□ -1.97
NIPBL-207ENST00000513819 VMO1Q7Z5L0 202 aa2.74□□□□□ -1.97
NIPBL-207ENST00000513819 KLK12Q9UKR0 248 aa2.74□□□□□ -1.97
NIPBL-207ENST00000513819 FANCMQ8IYD8 2048 aa2.74□□□□□ -1.97
NIPBL-207ENST00000513819 NUP98P52948 1817 aa2.74□□□□□ -1.97
NIPBL-207ENST00000513819 BAZ2BQ9UIF8 2168 aaKnown RBP2.73□□□□□ -1.97
NIPBL-207ENST00000513819 KIAA1671Q9BY89 1806 aa2.73□□□□□ -1.97
NIPBL-207ENST00000513819 IGLV3-16A0A075B6K0 115 aa2.73□□□□□ -1.97
NIPBL-207ENST00000513819 IGLV3-32A0A0A0MS00 114 aa2.73□□□□□ -1.97
NIPBL-207ENST00000513819 IGHV6-1A0A0B4J1U7 121 aa2.73□□□□□ -1.97
NIPBL-207ENST00000513819 IGHV3-74A0A0B4J1X5 117 aa2.73□□□□□ -1.97
NIPBL-207ENST00000513819 PIGBOS1A0A0B4J2F0 54 aa2.73□□□□□ -1.97
NIPBL-207ENST00000513819 A0A0J9YXV3 536 aa2.73□□□□□ -1.97
NIPBL-207ENST00000513819 E7EUB6 86 aa2.73□□□□□ -1.97
NIPBL-207ENST00000513819 K7EMI3 77 aa2.73□□□□□ -1.97
NIPBL-207ENST00000513819 HMGN2P05204 90 aaKnown RBP2.73□□□□□ -1.97
NIPBL-207ENST00000513819 DEFB116Q30KQ4 102 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 256 ms