RNA–Protein interactions for RNA: ENST00000513240.5

DDR1-271, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 2,882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-271ENST00000513240 IGHV4-30-2A0A087WSY4 118 aa11.18□□□□□ -0.62
DDR1-271ENST00000513240 H3BUX3 64 aa11.18□□□□□ -0.62
DDR1-271ENST00000513240 M0QXV9 152 aa11.18□□□□□ -0.62
DDR1-271ENST00000513240 ZNF493Q6ZR52 646 aa11.18□□□□□ -0.62
DDR1-271ENST00000513240 LYPD1Q8N2G4 141 aa11.18□□□□□ -0.62
DDR1-271ENST00000513240 C20orf173Q96LM9 149 aa11.18□□□□□ -0.62
DDR1-271ENST00000513240 VPREB3Q9UKI3 123 aa11.18□□□□□ -0.62
DDR1-271ENST00000513240 TRAV8-2A0A0B4J237 113 aa11.18□□□□□ -0.62
DDR1-271ENST00000513240 IGKV3D-20A0A0C4DH25 116 aa11.18□□□□□ -0.62
DDR1-271ENST00000513240 PF4V1P10720 104 aa11.18□□□□□ -0.62
DDR1-271ENST00000513240 PRR9Q5T870 116 aa11.18□□□□□ -0.62
DDR1-271ENST00000513240 FAM110DQ8TAY7 271 aaPredicted RBP11.18□□□□□ -0.62
DDR1-271ENST00000513240 RAX2Q96IS3 184 aa11.18□□□□□ -0.62
DDR1-271ENST00000513240 C16orf92Q96LL3 132 aa11.18□□□□□ -0.62
DDR1-271ENST00000513240 AVPP01185 164 aa11.18□□□□□ -0.62
DDR1-271ENST00000513240 TAL2Q16559 108 aa11.18□□□□□ -0.62
DDR1-271ENST00000513240 C5orf56Q8N8D9 126 aa11.18□□□□□ -0.62
DDR1-271ENST00000513240 SNCGO76070 127 aa11.17□□□□□ -0.62
DDR1-271ENST00000513240 IGKV3-20P01619 116 aa11.17□□□□□ -0.62
DDR1-271ENST00000513240 EBI3Q14213 229 aa11.17□□□□□ -0.62
DDR1-271ENST00000513240 ACANP16112 2415 aa11.17□□□□□ -0.62
DDR1-271ENST00000513240 USP24Q9UPU5 2620 aa11.17□□□□□ -0.62
DDR1-271ENST00000513240 HLA-DRB4P13762 266 aa11.17□□□□□ -0.62
DDR1-271ENST00000513240 HLA-DRB4X5D2U9 266 aa11.17□□□□□ -0.62
DDR1-271ENST00000513240 TRAV41A0A0B4J266 112 aa11.16□□□□□ -0.62
DDR1-271ENST00000513240 IFITM1P13164 125 aa11.16□□□□□ -0.62
DDR1-271ENST00000513240 PDE6HQ13956 83 aa11.16□□□□□ -0.62
DDR1-271ENST00000513240 DUX5Q96PT3 197 aa11.16□□□□□ -0.62
DDR1-271ENST00000513240 MTORP42345 2549 aa11.15□□□□□ -0.62
DDR1-271ENST00000513240 TCL1BO95988 128 aa11.15□□□□□ -0.62
DDR1-271ENST00000513240 METTL26Q96S19 204 aa11.15□□□□□ -0.62
DDR1-271ENST00000513240 MAP1LC3AQ9H492 121 aa11.15□□□□□ -0.62
DDR1-271ENST00000513240 C2CD3Q4AC94 2353 aa11.15□□□□□ -0.62
DDR1-271ENST00000513240 A8MWV9 139 aa11.15□□□□□ -0.62
DDR1-271ENST00000513240 M0R381 172 aa11.15□□□□□ -0.62
DDR1-271ENST00000513240 MEIG1Q5JSS6 88 aa11.15□□□□□ -0.62
DDR1-271ENST00000513240 CCL19Q99731 98 aa11.15□□□□□ -0.62
DDR1-271ENST00000513240 EEF1AKMT3Q96AZ1 226 aa11.14□□□□□ -0.63
DDR1-271ENST00000513240 RNF185Q96GF1 192 aa11.14□□□□□ -0.63
DDR1-271ENST00000513240 TMEM78Q5T7P6 136 aa11.13□□□□□ -0.63
DDR1-271ENST00000513240 MYMXA0A1B0GTQ4 84 aa11.13□□□□□ -0.63
DDR1-271ENST00000513240 CHD6Q8TD26 2715 aa11.13□□□□□ -0.63
DDR1-271ENST00000513240 TMEM262E9PQX1 116 aa11.12□□□□□ -0.63
DDR1-271ENST00000513240 IGHV1-69DA0A0B4J2H0 117 aa11.12□□□□□ -0.63
DDR1-271ENST00000513240 IGHV1-69P01742 117 aa11.12□□□□□ -0.63
DDR1-271ENST00000513240 SPANXN1Q5VSR9 72 aa11.12□□□□□ -0.63
DDR1-271ENST00000513240 JMJD1CQ15652 2540 aa11.12□□□□□ -0.63
DDR1-271ENST00000513240 GNRH2O43555 120 aa11.11□□□□□ -0.63
DDR1-271ENST00000513240 ATP5LO75964 103 aa11.11□□□□□ -0.63
DDR1-271ENST00000513240 TNFRSF6BO95407 300 aa11.11□□□□□ -0.63
DDR1-271ENST00000513240 RNASE4P34096 147 aaKnown RBP11.11□□□□□ -0.63
DDR1-271ENST00000513240 PSMG4Q5JS54 123 aa11.11□□□□□ -0.63
DDR1-271ENST00000513240 NOTCH2Q04721 2471 aa11.11□□□□□ -0.63
DDR1-271ENST00000513240 IGLC6P0CF74 106 aa11.11□□□□□ -0.63
DDR1-271ENST00000513240 OOSP1A8MZH6 123 aa11.1□□□□□ -0.63
DDR1-271ENST00000513240 TRBV6-1A0A0K0K1D8 114 aa11.1□□□□□ -0.63
DDR1-271ENST00000513240 LGALS1P09382 135 aaKnown RBP11.1□□□□□ -0.63
DDR1-271ENST00000513240 UBE2D3P61077 147 aa11.1□□□□□ -0.63
DDR1-271ENST00000513240 UBE2D2P62837 147 aa11.1□□□□□ -0.63
DDR1-271ENST00000513240 SRSF9Q13242 221 aaKnown RBP eCLIP11.1□□□□□ -0.63
DDR1-271ENST00000513240 VCX2Q9H322 139 aa11.1□□□□□ -0.63
DDR1-271ENST00000513240 PRORYQ9H606 182 aa11.1□□□□□ -0.63
DDR1-271ENST00000513240 MOB4Q9Y3A3 225 aa11.1□□□□□ -0.63
DDR1-271ENST00000513240 SCGB1C2P0DMR2 95 aa11.09□□□□□ -0.63
DDR1-271ENST00000513240 SCGB1D4Q6XE38 83 aa11.09□□□□□ -0.63
DDR1-271ENST00000513240 PRRC2AP48634 2157 aaKnown RBP11.09□□□□□ -0.63
DDR1-271ENST00000513240 CRIP2P52943 208 aaPredicted RBP11.09□□□□□ -0.63
DDR1-271ENST00000513240 C14orf178Q8N769 122 aaPredicted RBP11.09□□□□□ -0.63
DDR1-271ENST00000513240 PLEKHB2Q96CS7 222 aa11.09□□□□□ -0.63
DDR1-271ENST00000513240 GPHB5Q86YW7 130 aa11.08□□□□□ -0.64
DDR1-271ENST00000513240 JPT2Q9H910 190 aa11.08□□□□□ -0.64
DDR1-271ENST00000513240 MGPP08493 103 aa11.08□□□□□ -0.64
DDR1-271ENST00000513240 C9JAW5 83 aa11.07□□□□□ -0.64
DDR1-271ENST00000513240 S100A4P26447 101 aaKnown RBP11.07□□□□□ -0.64
DDR1-271ENST00000513240 RPL39LQ96EH5 51 aaKnown RBP11.07□□□□□ -0.64
DDR1-271ENST00000513240 AKAP9Q99996 3911 aa11.07□□□□□ -0.64
DDR1-271ENST00000513240 NACAE9PAV3 2078 aa11.07□□□□□ -0.64
DDR1-271ENST00000513240 IGHV4-59P01825 116 aa11.07□□□□□ -0.64
DDR1-271ENST00000513240 MYOZ3Q8TDC0 251 aa11.07□□□□□ -0.64
DDR1-271ENST00000513240 PIMREGQ9BSJ6 248 aa11.07□□□□□ -0.64
DDR1-271ENST00000513240 HTN1P15515 57 aa11.06□□□□□ -0.64
DDR1-271ENST00000513240 UBE2D1P51668 147 aa11.06□□□□□ -0.64
DDR1-271ENST00000513240 NXT2Q9NPJ8 142 aaKnown RBP11.06□□□□□ -0.64
DDR1-271ENST00000513240 ZNF815PA8K554 130 aa11.06□□□□□ -0.64
DDR1-271ENST00000513240 SLC25A20O43772 301 aa11.06□□□□□ -0.64
DDR1-271ENST00000513240 C15orf53Q8NAA6 179 aa11.06□□□□□ -0.64
DDR1-271ENST00000513240 RASL10AQ92737 203 aa11.06□□□□□ -0.64
DDR1-271ENST00000513240 CHCHD5Q9BSY4 110 aa11.06□□□□□ -0.64
DDR1-271ENST00000513240 TRAV12-2A0A075B6T6 113 aa11.06□□□□□ -0.64
DDR1-271ENST00000513240 TRBV7-1A0A0A6YYK4 115 aa11.06□□□□□ -0.64
DDR1-271ENST00000513240 IGHV7-4-1A0A0J9YVY3 117 aa11.06□□□□□ -0.64
DDR1-271ENST00000513240 PRM2P04554 102 aa11.06□□□□□ -0.64
DDR1-271ENST00000513240 TRPT1Q86TN4 253 aaKnown RBP11.06□□□□□ -0.64
DDR1-271ENST00000513240 NTN5Q8WTR8 489 aaPredicted RBP11.06□□□□□ -0.64
DDR1-271ENST00000513240 RHPN1-AS1Q9BWJ2 59 aa11.06□□□□□ -0.64
DDR1-271ENST00000513240 EMP1P54849 157 aa11.05□□□□□ -0.64
DDR1-271ENST00000513240 C10orf105Q8TEF2 133 aa11.05□□□□□ -0.64
DDR1-271ENST00000513240 CSDC2Q9Y534 153 aaKnown RBP11.05□□□□□ -0.64
DDR1-271ENST00000513240 LOC107984640A0A0U1RRK4 108 aa11.04□□□□□ -0.64
DDR1-271ENST00000513240 SBSPONQ8IVN8 264 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms