RNA–Protein interactions for RNA: ENST00000510852.1

USP53-207, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 2,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-207ENST00000510852 RAB37Q96AX2 223 aa7.22□□□□□ -1.25
USP53-207ENST00000510852 NABP2Q9BQ15 211 aa7.22□□□□□ -1.25
USP53-207ENST00000510852 XCL2Q9UBD3 114 aa7.22□□□□□ -1.25
USP53-207ENST00000510852 HILPDAQ9Y5L2 63 aa7.22□□□□□ -1.25
USP53-207ENST00000510852 ZFHX3Q15911 3703 aa7.22□□□□□ -1.25
USP53-207ENST00000510852 SETXQ7Z333 2677 aaKnown RBP7.21□□□□□ -1.25
USP53-207ENST00000510852 TRBV20OR9-2A0A075B6H5 130 aa7.21□□□□□ -1.25
USP53-207ENST00000510852 H3BT86 120 aa7.21□□□□□ -1.25
USP53-207ENST00000510852 MFAP2P55001 183 aa7.21□□□□□ -1.25
USP53-207ENST00000510852 SNRPD3P62318 126 aaKnown RBP7.21□□□□□ -1.25
USP53-207ENST00000510852 KRTAP1-1Q07627 177 aa7.21□□□□□ -1.25
USP53-207ENST00000510852 ZNF816Q0VGE8 651 aaPredicted RBP7.21□□□□□ -1.25
USP53-207ENST00000510852 ETDBQ3ZM63 59 aa7.21□□□□□ -1.25
USP53-207ENST00000510852 BRD3OSQ6XYD6 125 aa7.21□□□□□ -1.25
USP53-207ENST00000510852 C17orf77Q96MU5 243 aa7.21□□□□□ -1.25
USP53-207ENST00000510852 IGHV1-3A0A0C4DH29 117 aa7.21□□□□□ -1.26
USP53-207ENST00000510852 ASIPP42127 132 aa7.21□□□□□ -1.26
USP53-207ENST00000510852 LINC00173Q6ZV60 143 aa7.21□□□□□ -1.26
USP53-207ENST00000510852 DYNAPQ8N1N2 210 aa7.21□□□□□ -1.26
USP53-207ENST00000510852 HHLA3Q9XRX5 114 aa7.21□□□□□ -1.26
USP53-207ENST00000510852 ACANP16112 2415 aa7.2□□□□□ -1.26
USP53-207ENST00000510852 TRAV9-1A0A075B6T8 112 aa7.2□□□□□ -1.26
USP53-207ENST00000510852 TRAV1-1A0A0B4J248 108 aa7.2□□□□□ -1.26
USP53-207ENST00000510852 DIRC3C9JPN6 131 aa7.2□□□□□ -1.26
USP53-207ENST00000510852 LINC00242Q5T6M2 205 aa7.2□□□□□ -1.26
USP53-207ENST00000510852 TEN1Q86WV5 123 aa7.2□□□□□ -1.26
USP53-207ENST00000510852 VGLL1Q99990 258 aa7.2□□□□□ -1.26
USP53-207ENST00000510852 IGHV3-72A0A0B4J1Y9 119 aa7.2□□□□□ -1.26
USP53-207ENST00000510852 CST7O76096 145 aa7.2□□□□□ -1.26
USP53-207ENST00000510852 IGKV1-39P01597 117 aa7.2□□□□□ -1.26
USP53-207ENST00000510852 IGKV1D-39P04432 117 aa7.2□□□□□ -1.26
USP53-207ENST00000510852 HLA-DRB4P13762 266 aa7.2□□□□□ -1.26
USP53-207ENST00000510852 CBLN1P23435 193 aa7.2□□□□□ -1.26
USP53-207ENST00000510852 ZNF80P51504 273 aaPredicted RBP7.2□□□□□ -1.26
USP53-207ENST00000510852 REG3AQ06141 175 aa7.2□□□□□ -1.26
USP53-207ENST00000510852 RBMY1FQ15415 496 aaKnown RBP7.2□□□□□ -1.26
USP53-207ENST00000510852 TIMM17AQ99595 171 aa7.2□□□□□ -1.26
USP53-207ENST00000510852 HLA-DRB4X5D2U9 266 aa7.2□□□□□ -1.26
USP53-207ENST00000510852 H3BUT2 72 aa7.19□□□□□ -1.26
USP53-207ENST00000510852 FSHBP01225 129 aa7.19□□□□□ -1.26
USP53-207ENST00000510852 IGKV1-16P04430 117 aa7.19□□□□□ -1.26
USP53-207ENST00000510852 WFDC2Q14508 124 aa7.19□□□□□ -1.26
USP53-207ENST00000510852 DPPA3Q6W0C5 159 aa7.19□□□□□ -1.26
USP53-207ENST00000510852 LYZL2Q7Z4W2 148 aa7.19□□□□□ -1.26
USP53-207ENST00000510852 BPIFA4PQ86YQ2 179 aa7.19□□□□□ -1.26
USP53-207ENST00000510852 PLA2G2EQ9NZK7 142 aa7.19□□□□□ -1.26
USP53-207ENST00000510852 SELENOKQ9Y6D0 94 aa7.19□□□□□ -1.26
USP53-207ENST00000510852 CYSRT1A8MQ03 144 aa7.19□□□□□ -1.26
USP53-207ENST00000510852 COX7A2LO14548 114 aa7.19□□□□□ -1.26
USP53-207ENST00000510852 UBE2L6O14933 153 aa7.19□□□□□ -1.26
USP53-207ENST00000510852 PSPHP1O15172 72 aa7.19□□□□□ -1.26
USP53-207ENST00000510852 LGALS9CQ6DKI2 356 aa7.19□□□□□ -1.26
USP53-207ENST00000510852 SERP1Q9Y6X1 66 aa7.19□□□□□ -1.26
USP53-207ENST00000510852 TLN2Q9Y4G6 2542 aa7.19□□□□□ -1.26
USP53-207ENST00000510852 PDPNQ86YL7 162 aa7.18□□□□□ -1.26
USP53-207ENST00000510852 SMR3AQ99954 134 aa7.18□□□□□ -1.26
USP53-207ENST00000510852 ATP6V0E1O15342 81 aa7.18□□□□□ -1.26
USP53-207ENST00000510852 IGKV1-5P01602 117 aa7.18□□□□□ -1.26
USP53-207ENST00000510852 COX7CP15954 63 aa7.18□□□□□ -1.26
USP53-207ENST00000510852 LGALS3P17931 250 aaKnown RBP7.18□□□□□ -1.26
USP53-207ENST00000510852 SH2D6Q7Z4S9 175 aa7.18□□□□□ -1.26
USP53-207ENST00000510852 FAM213BQ8TBF2 198 aa7.18□□□□□ -1.26
USP53-207ENST00000510852 CHCHD5Q9BSY4 110 aa7.18□□□□□ -1.26
USP53-207ENST00000510852 IGHV6-1A0A0B4J1U7 121 aa7.17□□□□□ -1.26
USP53-207ENST00000510852 TMEM256-PLSCR3K7ERE1 68 aa7.17□□□□□ -1.26
USP53-207ENST00000510852 VDAC1P21796 283 aa7.17□□□□□ -1.26
USP53-207ENST00000510852 CD24P25063 80 aa7.17□□□□□ -1.26
USP53-207ENST00000510852 LCA10Q71F78 164 aa7.17□□□□□ -1.26
USP53-207ENST00000510852 OR8A1Q8NGG7 326 aa7.17□□□□□ -1.26
USP53-207ENST00000510852 TRBV24-1A0A075B6N3 115 aa7.17□□□□□ -1.26
USP53-207ENST00000510852 PIGBOS1A0A0B4J2F0 54 aa7.17□□□□□ -1.26
USP53-207ENST00000510852 IGKV1D-33P01593 117 aa7.17□□□□□ -1.26
USP53-207ENST00000510852 IGKV1-33P01594 117 aa7.17□□□□□ -1.26
USP53-207ENST00000510852 NMSQ5H8A3 153 aa7.17□□□□□ -1.26
USP53-207ENST00000510852 EBLN2Q6P2I7 272 aa7.17□□□□□ -1.26
USP53-207ENST00000510852 PMCHL2Q9BQD1 86 aa7.17□□□□□ -1.26
USP53-207ENST00000510852 ZNF706Q9Y5V0 76 aaPredicted RBP7.17□□□□□ -1.26
USP53-207ENST00000510852 K7ERJ3 54 aa7.16□□□□□ -1.26
USP53-207ENST00000510852 LY6G6DO95868 133 aa7.16□□□□□ -1.26
USP53-207ENST00000510852 CXCL5P42830 114 aa7.16□□□□□ -1.26
USP53-207ENST00000510852 SLC39A9Q9NUM3 307 aa7.16□□□□□ -1.26
USP53-207ENST00000510852 A8MWL6 223 aa7.16□□□□□ -1.26
USP53-207ENST00000510852 NDUFC2-KCTD14E9PQ53 114 aa7.16□□□□□ -1.26
USP53-207ENST00000510852 P0C879 139 aa7.16□□□□□ -1.26
USP53-207ENST00000510852 ERVK-16P61578 105 aa7.16□□□□□ -1.26
USP53-207ENST00000510852 Q6ZRM9 215 aa7.16□□□□□ -1.26
USP53-207ENST00000510852 TNFRSF19Q9NS68 423 aa7.16□□□□□ -1.26
USP53-207ENST00000510852 HIVEP1P15822 2718 aa7.15□□□□□ -1.26
USP53-207ENST00000510852 MDFIC2A0A1B0GVS7 189 aa7.15□□□□□ -1.26
USP53-207ENST00000510852 IGLL5B9A064 214 aa7.15□□□□□ -1.26
USP53-207ENST00000510852 TCL1BO95988 128 aa7.15□□□□□ -1.26
USP53-207ENST00000510852 IGLV2-23P01705 113 aa7.15□□□□□ -1.26
USP53-207ENST00000510852 HBBP68871 147 aa7.15□□□□□ -1.26
USP53-207ENST00000510852 DEFB112Q30KQ8 113 aa7.15□□□□□ -1.26
USP53-207ENST00000510852 TOMM6Q96B49 74 aa7.15□□□□□ -1.26
USP53-207ENST00000510852 MXRA5Q9NR99 2828 aa7.15□□□□□ -1.27
USP53-207ENST00000510852 SONP18583 2426 aaKnown RBP7.15□□□□□ -1.27
USP53-207ENST00000510852 INS-IGF2F8WCM5 200 aa7.15□□□□□ -1.27
USP53-207ENST00000510852 SAA1P0DJI8 122 aaPredicted RBP7.15□□□□□ -1.27
USP53-207ENST00000510852 DYNLT3P51808 116 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms