RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 UBE2DNLQ8IWF7 75 aa10.31□□□□□ -0.76
HMGCL-208ENST00000509389 C9orf85Q96MD7 179 aa10.31□□□□□ -0.76
HMGCL-208ENST00000509389 DNAH11Q96DT5 4516 aa10.31□□□□□ -0.76
HMGCL-208ENST00000509389 DYNC1H1Q14204 4646 aaKnown RBP10.3□□□□□ -0.76
HMGCL-208ENST00000509389 IGHV3-16A0A0C4DH30 117 aa10.3□□□□□ -0.76
HMGCL-208ENST00000509389 GRIFINA4D1Z8 144 aa10.3□□□□□ -0.76
HMGCL-208ENST00000509389 ASIPP42127 132 aa10.3□□□□□ -0.76
HMGCL-208ENST00000509389 ZNF493Q6ZR52 646 aa10.3□□□□□ -0.76
HMGCL-208ENST00000509389 NAGKQ9UJ70 344 aa10.3□□□□□ -0.76
HMGCL-208ENST00000509389 PCLOQ9Y6V0 5065 aa10.3□□□□□ -0.76
HMGCL-208ENST00000509389 NACAE9PAV3 2078 aa10.3□□□□□ -0.76
HMGCL-208ENST00000509389 IGLV2-18A0A075B6J9 118 aa10.29□□□□□ -0.76
HMGCL-208ENST00000509389 H3BVH4 76 aa10.29□□□□□ -0.76
HMGCL-208ENST00000509389 HLA-DQA1P01909 254 aa10.29□□□□□ -0.76
HMGCL-208ENST00000509389 RPS10P46783 165 aaKnown RBP10.29□□□□□ -0.76
HMGCL-208ENST00000509389 DMRTA1Q5VZB9 504 aa10.29□□□□□ -0.76
HMGCL-208ENST00000509389 Q6ZR54 194 aa10.29□□□□□ -0.76
HMGCL-208ENST00000509389 PKD1P98161 4303 aa10.29□□□□□ -0.76
HMGCL-208ENST00000509389 TRGV11A0A075B6L2 103 aa10.28□□□□□ -0.76
HMGCL-208ENST00000509389 DAD1P61803 113 aa10.28□□□□□ -0.76
HMGCL-208ENST00000509389 CACNG7P62955 275 aa10.28□□□□□ -0.76
HMGCL-208ENST00000509389 RIGQ13278 110 aa10.28□□□□□ -0.76
HMGCL-208ENST00000509389 OR10AG1Q8NH19 301 aa10.28□□□□□ -0.76
HMGCL-208ENST00000509389 TMEM208Q9BTX3 173 aa10.28□□□□□ -0.76
HMGCL-208ENST00000509389 SNURFLB1AK76 121 aa10.27□□□□□ -0.76
HMGCL-208ENST00000509389 GNRH2O43555 120 aa10.27□□□□□ -0.76
HMGCL-208ENST00000509389 SPINK4O60575 86 aa10.27□□□□□ -0.76
HMGCL-208ENST00000509389 TRGC2P03986 189 aa10.27□□□□□ -0.76
HMGCL-208ENST00000509389 PRM2P04554 102 aa10.27□□□□□ -0.76
HMGCL-208ENST00000509389 S100A8P05109 93 aa10.27□□□□□ -0.76
HMGCL-208ENST00000509389 C11orf72Q8NBR9 251 aa10.27□□□□□ -0.76
HMGCL-208ENST00000509389 PTH2Q96A98 100 aa10.27□□□□□ -0.76
HMGCL-208ENST00000509389 BORCS7Q96B45 105 aa10.26□□□□□ -0.77
HMGCL-208ENST00000509389 C1orf196B1AJZ1 125 aa10.26□□□□□ -0.77
HMGCL-208ENST00000509389 NTF3P20783 257 aa10.26□□□□□ -0.77
HMGCL-208ENST00000509389 SLAQ13239 276 aa10.26□□□□□ -0.77
HMGCL-208ENST00000509389 PIK3CD-AS1Q5SR53 167 aa10.26□□□□□ -0.77
HMGCL-208ENST00000509389 RNASE8Q8TDE3 154 aaKnown RBP10.26□□□□□ -0.77
HMGCL-208ENST00000509389 TMEM191AQ9H0A3 160 aa10.26□□□□□ -0.77
HMGCL-208ENST00000509389 MRPL18Q9H0U6 180 aaKnown RBP10.26□□□□□ -0.77
HMGCL-208ENST00000509389 CAMPP49913 170 aa10.25□□□□□ -0.77
HMGCL-208ENST00000509389 FRZBQ92765 325 aa10.25□□□□□ -0.77
HMGCL-208ENST00000509389 TPPP3Q9BW30 176 aa10.25□□□□□ -0.77
HMGCL-208ENST00000509389 MDFICQ9P1T7 246 aa10.25□□□□□ -0.77
HMGCL-208ENST00000509389 TRAPPC1Q9Y5R8 145 aa10.25□□□□□ -0.77
HMGCL-208ENST00000509389 LYRM9A8MSI8 78 aa10.24□□□□□ -0.77
HMGCL-208ENST00000509389 HIST1H2BKO60814 126 aa10.24□□□□□ -0.77
HMGCL-208ENST00000509389 HIST1H2BJP06899 126 aa10.24□□□□□ -0.77
HMGCL-208ENST00000509389 HIST1H2BOP23527 126 aa10.24□□□□□ -0.77
HMGCL-208ENST00000509389 S100A4P26447 101 aaKnown RBP10.24□□□□□ -0.77
HMGCL-208ENST00000509389 HIST1H2BBP33778 126 aa10.24□□□□□ -0.77
HMGCL-208ENST00000509389 HIST1H2BDP58876 126 aa10.24□□□□□ -0.77
HMGCL-208ENST00000509389 HIST1H2BCP62807 126 aa10.24□□□□□ -0.77
HMGCL-208ENST00000509389 ZNF415Q09FC8 603 aa10.24□□□□□ -0.77
HMGCL-208ENST00000509389 FABP9Q0Z7S8 132 aa10.24□□□□□ -0.77
HMGCL-208ENST00000509389 HIST2H2BEQ16778 126 aa10.24□□□□□ -0.77
HMGCL-208ENST00000509389 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.24□□□□□ -0.77
HMGCL-208ENST00000509389 ZFP82Q8N141 532 aa10.24□□□□□ -0.77
HMGCL-208ENST00000509389 HIST1H2BHQ93079 126 aa10.24□□□□□ -0.77
HMGCL-208ENST00000509389 HIST1H2BNQ99877 126 aa10.24□□□□□ -0.77
HMGCL-208ENST00000509389 HIST1H2BMQ99879 126 aa10.24□□□□□ -0.77
HMGCL-208ENST00000509389 MSRB1Q9NZV6 116 aa10.24□□□□□ -0.77
HMGCL-208ENST00000509389 PLAC8L1A1L4L8 177 aa10.23□□□□□ -0.77
HMGCL-208ENST00000509389 CBY3A6NI87 242 aa10.23□□□□□ -0.77
HMGCL-208ENST00000509389 AZU1P20160 251 aa10.23□□□□□ -0.77
HMGCL-208ENST00000509389 RAB5BP61020 215 aa10.23□□□□□ -0.77
HMGCL-208ENST00000509389 FAM104BQ5XKR9 115 aa10.23□□□□□ -0.77
HMGCL-208ENST00000509389 C15orf53Q8NAA6 179 aa10.23□□□□□ -0.77
HMGCL-208ENST00000509389 TMEM263Q8WUH6 116 aaKnown RBP10.23□□□□□ -0.77
HMGCL-208ENST00000509389 LINC01587Q99440 93 aa10.23□□□□□ -0.77
HMGCL-208ENST00000509389 TRGC1P0CF51 173 aa10.22□□□□□ -0.77
HMGCL-208ENST00000509389 DEFB130BP0DP73 79 aa10.22□□□□□ -0.77
HMGCL-208ENST00000509389 DEFB130AP0DP74 79 aa10.22□□□□□ -0.77
HMGCL-208ENST00000509389 TWIST1Q15672 202 aa10.22□□□□□ -0.77
HMGCL-208ENST00000509389 C1orf134Q5TEV5 83 aa10.22□□□□□ -0.77
HMGCL-208ENST00000509389 PHLDA3Q9Y5J5 127 aa10.22□□□□□ -0.77
HMGCL-208ENST00000509389 KIF25-AS1Q9Y6Z4 181 aa10.22□□□□□ -0.77
HMGCL-208ENST00000509389 RYR1P21817 5038 aa10.21□□□□□ -0.77
HMGCL-208ENST00000509389 MUC21A0A0G2JKD1 596 aa10.21□□□□□ -0.78
HMGCL-208ENST00000509389 MUC21A0A140T8X8 626 aa10.21□□□□□ -0.78
HMGCL-208ENST00000509389 APCSP02743 223 aa10.21□□□□□ -0.78
HMGCL-208ENST00000509389 COA6Q5JTJ3 125 aaKnown RBP10.21□□□□□ -0.78
HMGCL-208ENST00000509389 SPANXN1Q5VSR9 72 aa10.21□□□□□ -0.78
HMGCL-208ENST00000509389 RNF185Q96GF1 192 aa10.21□□□□□ -0.78
HMGCL-208ENST00000509389 SPXQ9BT56 116 aa10.21□□□□□ -0.78
HMGCL-208ENST00000509389 RAB4BP61018 213 aa10.2□□□□□ -0.78
HMGCL-208ENST00000509389 C16orf74Q96GX8 76 aa10.2□□□□□ -0.78
HMGCL-208ENST00000509389 AP1S3Q96PC3 154 aa10.2□□□□□ -0.78
HMGCL-208ENST00000509389 TMA7Q9Y2S6 64 aaKnown RBP10.2□□□□□ -0.78
HMGCL-208ENST00000509389 F5H768 121 aa10.19□□□□□ -0.78
HMGCL-208ENST00000509389 M0R2P5 195 aa10.19□□□□□ -0.78
HMGCL-208ENST00000509389 M0R381 172 aa10.19□□□□□ -0.78
HMGCL-208ENST00000509389 LINC00315P59091 139 aa10.19□□□□□ -0.78
HMGCL-208ENST00000509389 AMN1Q8IY45 258 aa10.19□□□□□ -0.78
HMGCL-208ENST00000509389 ALKBH7Q9BT30 221 aaPredicted RBP10.19□□□□□ -0.78
HMGCL-208ENST00000509389 GSN-AS1Q9NRJ2 163 aa10.19□□□□□ -0.78
HMGCL-208ENST00000509389 NUDT3O95989 172 aa10.18□□□□□ -0.78
HMGCL-208ENST00000509389 ATP5G1P05496 136 aa10.18□□□□□ -0.78
HMGCL-208ENST00000509389 HTN1P15515 57 aa10.18□□□□□ -0.78
HMGCL-208ENST00000509389 RAB4AP20338 218 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms