RNA–Protein interactions for RNA: ENST00000509328.1

HOXC6-204, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-204ENST00000509328 FAM74A4Q5TZK3 123 aa13.94□□□□□ -0.18
HOXC6-204ENST00000509328 LINC01551Q86U37 167 aa13.94□□□□□ -0.18
HOXC6-204ENST00000509328 ZNRF2Q8NHG8 242 aa13.94□□□□□ -0.18
HOXC6-204ENST00000509328 TPPP3Q9BW30 176 aa13.94□□□□□ -0.18
HOXC6-204ENST00000509328 MRPS16Q9Y3D3 137 aaKnown RBP13.94□□□□□ -0.18
HOXC6-204ENST00000509328 A0A087WWL8 130 aa13.93□□□□□ -0.18
HOXC6-204ENST00000509328 A0A1W2PPQ1 181 aa13.93□□□□□ -0.18
HOXC6-204ENST00000509328 F2Z2F3 143 aa13.93□□□□□ -0.18
HOXC6-204ENST00000509328 CRYGDP07320 174 aa13.93□□□□□ -0.18
HOXC6-204ENST00000509328 Q6ZSN1 163 aa13.93□□□□□ -0.18
HOXC6-204ENST00000509328 SH2D6Q7Z4S9 175 aa13.93□□□□□ -0.18
HOXC6-204ENST00000509328 UPK3BQ9BT76 320 aa13.93□□□□□ -0.18
HOXC6-204ENST00000509328 GATCO43716 136 aaKnown RBP13.92□□□□□ -0.18
HOXC6-204ENST00000509328 CACNG7P62955 275 aa13.92□□□□□ -0.18
HOXC6-204ENST00000509328 IFITM2Q01629 132 aa13.92□□□□□ -0.18
HOXC6-204ENST00000509328 TMEM241Q24JQ0 296 aa13.92□□□□□ -0.18
HOXC6-204ENST00000509328 LYPD5Q6UWN5 251 aa13.92□□□□□ -0.18
HOXC6-204ENST00000509328 IGLV2-18A0A075B6J9 118 aa13.91□□□□□ -0.18
HOXC6-204ENST00000509328 ERVFC1-1P60608 527 aa13.91□□□□□ -0.18
HOXC6-204ENST00000509328 CLLU1Q5K131 121 aa13.91□□□□□ -0.18
HOXC6-204ENST00000509328 SSTP61278 116 aa13.9□□□□□ -0.18
HOXC6-204ENST00000509328 LYZL1Q6UWQ5 148 aa13.9□□□□□ -0.18
HOXC6-204ENST00000509328 M0R2N4 97 aa13.89□□□□□ -0.19
HOXC6-204ENST00000509328 CTRLP40313 264 aa13.89□□□□□ -0.19
HOXC6-204ENST00000509328 CT83Q5H943 113 aa13.89□□□□□ -0.19
HOXC6-204ENST00000509328 SOHLH1Q5JUK2 328 aa13.89□□□□□ -0.19
HOXC6-204ENST00000509328 C14orf178Q8N769 122 aaPredicted RBP13.89□□□□□ -0.19
HOXC6-204ENST00000509328 AP1S3Q96PC3 154 aa13.89□□□□□ -0.19
HOXC6-204ENST00000509328 Q9H8V8 135 aa13.89□□□□□ -0.19
HOXC6-204ENST00000509328 NAT8Q9UHE5 227 aa13.89□□□□□ -0.19
HOXC6-204ENST00000509328 A8MWL6 223 aa13.88□□□□□ -0.19
HOXC6-204ENST00000509328 WDR73Q6P4I2 378 aa13.88□□□□□ -0.19
HOXC6-204ENST00000509328 OSTCQ9NRP0 149 aa13.88□□□□□ -0.19
HOXC6-204ENST00000509328 SMIM17P0DL12 118 aa13.87□□□□□ -0.19
HOXC6-204ENST00000509328 RAB4BP61018 213 aa13.87□□□□□ -0.19
HOXC6-204ENST00000509328 RPL23P62829 140 aaKnown RBP13.87□□□□□ -0.19
HOXC6-204ENST00000509328 Q6ZR54 194 aa13.87□□□□□ -0.19
HOXC6-204ENST00000509328 TIRAPP58753 221 aa13.86□□□□□ -0.19
HOXC6-204ENST00000509328 ZNF56Q15929 161 aa13.86□□□□□ -0.19
HOXC6-204ENST00000509328 C15orf54Q8N8G6 183 aa13.86□□□□□ -0.19
HOXC6-204ENST00000509328 GTSF1Q8WW33 167 aa13.86□□□□□ -0.19
HOXC6-204ENST00000509328 ISOC2Q96AB3 205 aa13.86□□□□□ -0.19
HOXC6-204ENST00000509328 MSRB1Q9NZV6 116 aa13.86□□□□□ -0.19
HOXC6-204ENST00000509328 KIF25-AS1Q9Y6Z4 181 aa13.86□□□□□ -0.19
HOXC6-204ENST00000509328 NBDYA0A0U1RRE5 68 aa13.85□□□□□ -0.19
HOXC6-204ENST00000509328 NTF3P20783 257 aa13.85□□□□□ -0.19
HOXC6-204ENST00000509328 ADIRFQ15847 76 aa13.85□□□□□ -0.19
HOXC6-204ENST00000509328 CNFNQ9BYD5 112 aa13.85□□□□□ -0.19
HOXC6-204ENST00000509328 TRBV10-1A0A0K0K1A3 114 aa13.84□□□□□ -0.19
HOXC6-204ENST00000509328 GAGE12JA6NER3 117 aa13.84□□□□□ -0.19
HOXC6-204ENST00000509328 TRGC1P0CF51 173 aa13.84□□□□□ -0.19
HOXC6-204ENST00000509328 LINC00694P0DN24 101 aa13.84□□□□□ -0.19
HOXC6-204ENST00000509328 GAGE1Q13065 139 aa13.84□□□□□ -0.19
HOXC6-204ENST00000509328 GAGE4Q13068 117 aa13.84□□□□□ -0.19
HOXC6-204ENST00000509328 GAGE5Q13069 117 aa13.84□□□□□ -0.19
HOXC6-204ENST00000509328 GAGE13Q4V321 117 aa13.84□□□□□ -0.19
HOXC6-204ENST00000509328 ATP6V0E2Q8NHE4 81 aa13.84□□□□□ -0.19
HOXC6-204ENST00000509328 Q9UF83 564 aa13.84□□□□□ -0.19
HOXC6-204ENST00000509328 F5H697 171 aa13.83□□□□□ -0.2
HOXC6-204ENST00000509328 SIVA1O15304 175 aa13.83□□□□□ -0.2
HOXC6-204ENST00000509328 TSKUQ8WUA8 353 aa13.83□□□□□ -0.2
HOXC6-204ENST00000509328 GFRA4Q9GZZ7 299 aa13.83□□□□□ -0.2
HOXC6-204ENST00000509328 FOXA3P55318 350 aaPredicted RBP13.82□□□□□ -0.2
HOXC6-204ENST00000509328 LINC00315P59091 139 aa13.82□□□□□ -0.2
HOXC6-204ENST00000509328 TWIST1Q15672 202 aa13.82□□□□□ -0.2
HOXC6-204ENST00000509328 TTC32Q5I0X7 151 aa13.82□□□□□ -0.2
HOXC6-204ENST00000509328 GTSF1LQ9H1H1 148 aa13.82□□□□□ -0.2
HOXC6-204ENST00000509328 V9GYV3 84 aa13.82□□□□□ -0.2
HOXC6-204ENST00000509328 FAM231BA6NCW3 169 aa13.81□□□□□ -0.2
HOXC6-204ENST00000509328 OR10G8Q8NGN5 311 aa13.81□□□□□ -0.2
HOXC6-204ENST00000509328 PGLYRP4Q96LB8 373 aa13.81□□□□□ -0.2
HOXC6-204ENST00000509328 MGPP08493 103 aa13.8□□□□□ -0.2
HOXC6-204ENST00000509328 EVI2AP22794 236 aa13.8□□□□□ -0.2
HOXC6-204ENST00000509328 RPL36AP83881 106 aaKnown RBP13.8□□□□□ -0.2
HOXC6-204ENST00000509328 RPL36ALQ969Q0 106 aaKnown RBP13.8□□□□□ -0.2
HOXC6-204ENST00000509328 DPH3P1Q9H4G8 78 aa13.8□□□□□ -0.2
HOXC6-204ENST00000509328 TRBV7-3A0A075B6L6 115 aa13.79□□□□□ -0.2
HOXC6-204ENST00000509328 WFDC10BQ8IUB3 73 aa13.79□□□□□ -0.2
HOXC6-204ENST00000509328 BORCS7Q96B45 105 aa13.79□□□□□ -0.2
HOXC6-204ENST00000509328 FRAS1Q86XX4 4008 aa13.79□□□□□ -0.2
HOXC6-204ENST00000509328 TRAV8-6A0A0B4J262 113 aa13.78□□□□□ -0.2
HOXC6-204ENST00000509328 HIGD1CA8MV81 97 aa13.78□□□□□ -0.2
HOXC6-204ENST00000509328 LELP1Q5T871 98 aa13.78□□□□□ -0.2
HOXC6-204ENST00000509328 C1orf134Q5TEV5 83 aa13.78□□□□□ -0.2
HOXC6-204ENST00000509328 NEXN-AS1Q8NBZ9 246 aa13.78□□□□□ -0.2
HOXC6-204ENST00000509328 DNAH10Q8IVF4 4471 aa13.78□□□□□ -0.2
HOXC6-204ENST00000509328 UBE2D3P61077 147 aa13.77□□□□□ -0.21
HOXC6-204ENST00000509328 UBE2D2P62837 147 aa13.77□□□□□ -0.21
HOXC6-204ENST00000509328 UQCC3Q6UW78 93 aa13.77□□□□□ -0.21
HOXC6-204ENST00000509328 SMIM15Q7Z3B0 74 aa13.77□□□□□ -0.21
HOXC6-204ENST00000509328 H7C1H1 209 aa13.76□□□□□ -0.21
HOXC6-204ENST00000509328 OR10J3Q5JRS4 329 aa13.76□□□□□ -0.21
HOXC6-204ENST00000509328 SUMO4Q6EEV6 95 aa13.76□□□□□ -0.21
HOXC6-204ENST00000509328 KRTAP1-5Q9BYS1 174 aa13.76□□□□□ -0.21
HOXC6-204ENST00000509328 A0A087WWC5 75 aa13.75□□□□□ -0.21
HOXC6-204ENST00000509328 A0A1B0GUT8 65 aa13.75□□□□□ -0.21
HOXC6-204ENST00000509328 M0QY20 66 aa13.75□□□□□ -0.21
HOXC6-204ENST00000509328 RTL8CO15255 209 aa13.75□□□□□ -0.21
HOXC6-204ENST00000509328 DNAH10OSP0CZ25 163 aa13.75□□□□□ -0.21
HOXC6-204ENST00000509328 LINC00336Q6ZUF6 198 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 147.4 ms