RNA–Protein interactions for RNA: ENST00000509206.1

RNF4-211, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-211ENST00000509206 TRAV8-4A0A0B4J246 113 aa2.31□□□□□ -2.04
RNF4-211ENST00000509206 DISC1C4P0D8 188 aa2.31□□□□□ -2.04
RNF4-211ENST00000509206 RAB3DO95716 219 aa2.31□□□□□ -2.04
RNF4-211ENST00000509206 P01737 135 aa2.31□□□□□ -2.04
RNF4-211ENST00000509206 CD3DP04234 171 aa2.31□□□□□ -2.04
RNF4-211ENST00000509206 GZMBP10144 247 aa2.31□□□□□ -2.04
RNF4-211ENST00000509206 S100A4P26447 101 aaKnown RBP2.31□□□□□ -2.04
RNF4-211ENST00000509206 S100A10P60903 97 aa2.31□□□□□ -2.04
RNF4-211ENST00000509206 RAB2AP61019 212 aa2.31□□□□□ -2.04
RNF4-211ENST00000509206 RPL36AP83881 106 aaKnown RBP2.31□□□□□ -2.04
RNF4-211ENST00000509206 CYCSP99999 105 aaKnown RBP2.31□□□□□ -2.04
RNF4-211ENST00000509206 PDE6HQ13956 83 aa2.31□□□□□ -2.04
RNF4-211ENST00000509206 MPV17L2Q567V2 206 aa2.31□□□□□ -2.04
RNF4-211ENST00000509206 ZFP2Q6ZN57 461 aa2.31□□□□□ -2.04
RNF4-211ENST00000509206 LINC00337Q8N6G1 96 aa2.31□□□□□ -2.04
RNF4-211ENST00000509206 DYNC2LI1Q8TCX1 351 aa2.31□□□□□ -2.04
RNF4-211ENST00000509206 SCGB3A2Q96PL1 93 aa2.31□□□□□ -2.04
RNF4-211ENST00000509206 PFDN5Q99471 154 aa2.31□□□□□ -2.04
RNF4-211ENST00000509206 RTBDNQ9BSG5 229 aaPredicted RBP2.31□□□□□ -2.04
RNF4-211ENST00000509206 NMES1Q9C002 83 aa2.31□□□□□ -2.04
RNF4-211ENST00000509206 MIXL1Q9H2W2 232 aa2.31□□□□□ -2.04
RNF4-211ENST00000509206 PSENENQ9NZ42 101 aa2.31□□□□□ -2.04
RNF4-211ENST00000509206 BLOC1S6Q9UL45 172 aa2.31□□□□□ -2.04
RNF4-211ENST00000509206 IGLV7-46A0A075B6I9 117 aa2.3□□□□□ -2.04
RNF4-211ENST00000509206 A0A087WZ39 114 aa2.3□□□□□ -2.04
RNF4-211ENST00000509206 A0A096LNI7 61 aa2.3□□□□□ -2.04
RNF4-211ENST00000509206 TRBV6-8A0A0A6YYG3 113 aa2.3□□□□□ -2.04
RNF4-211ENST00000509206 H0Y9J4 135 aa2.3□□□□□ -2.04
RNF4-211ENST00000509206 EIF3GO75821 320 aaKnown RBP eCLIP2.3□□□□□ -2.04
RNF4-211ENST00000509206 PTTG1O95997 202 aa2.3□□□□□ -2.04
RNF4-211ENST00000509206 TSHBP01222 138 aa2.3□□□□□ -2.04
RNF4-211ENST00000509206 CAMLGP49069 296 aa2.3□□□□□ -2.04
RNF4-211ENST00000509206 CAV2P51636 162 aa2.3□□□□□ -2.04
RNF4-211ENST00000509206 TAS2R19P59542 299 aa2.3□□□□□ -2.04
RNF4-211ENST00000509206 HIGD2BQ4VC39 106 aa2.3□□□□□ -2.04
RNF4-211ENST00000509206 ZNF506Q5JVG8 444 aa2.3□□□□□ -2.04
RNF4-211ENST00000509206 FAM162BQ5T6X4 162 aa2.3□□□□□ -2.04
RNF4-211ENST00000509206 FAM74A4Q5TZK3 123 aa2.3□□□□□ -2.04
RNF4-211ENST00000509206 C14orf178Q8N769 122 aaPredicted RBP2.3□□□□□ -2.04
RNF4-211ENST00000509206 Q8N9P0 234 aaPredicted RBP2.3□□□□□ -2.04
RNF4-211ENST00000509206 OR10G7Q8NGN6 311 aa2.3□□□□□ -2.04
RNF4-211ENST00000509206 NAA50Q9GZZ1 169 aaKnown RBP2.3□□□□□ -2.04
RNF4-211ENST00000509206 GFRA4Q9GZZ7 299 aa2.3□□□□□ -2.04
RNF4-211ENST00000509206 PARLQ9H300 379 aa2.3□□□□□ -2.04
RNF4-211ENST00000509206 COMMD3Q9UBI1 195 aa2.3□□□□□ -2.04
RNF4-211ENST00000509206 LENEPQ9Y5L5 61 aa2.3□□□□□ -2.04
RNF4-211ENST00000509206 TRAV6A0A075B6T7 132 aa2.29□□□□□ -2.04
RNF4-211ENST00000509206 A0A1B0GUV1 79 aa2.29□□□□□ -2.04
RNF4-211ENST00000509206 DUXBA0A1W2PPF3 345 aa2.29□□□□□ -2.04
RNF4-211ENST00000509206 FAM25AB3EWG3 89 aa2.29□□□□□ -2.04
RNF4-211ENST00000509206 FAM25CB3EWG5 89 aa2.29□□□□□ -2.04
RNF4-211ENST00000509206 FAM25GB3EWG6 89 aa2.29□□□□□ -2.04
RNF4-211ENST00000509206 K7EPK0 472 aa2.29□□□□□ -2.04
RNF4-211ENST00000509206 M0R2T5 61 aa2.29□□□□□ -2.04
RNF4-211ENST00000509206 IGLV7-43P04211 117 aa2.29□□□□□ -2.04
RNF4-211ENST00000509206 NBEAP1P0C6P0 100 aa2.29□□□□□ -2.04
RNF4-211ENST00000509206 LINC00694P0DN24 101 aa2.29□□□□□ -2.04
RNF4-211ENST00000509206 PYYP10082 97 aa2.29□□□□□ -2.04
RNF4-211ENST00000509206 SULT1A2P50226 295 aa2.29□□□□□ -2.04
RNF4-211ENST00000509206 RANP62826 216 aaKnown RBP2.29□□□□□ -2.04
RNF4-211ENST00000509206 RBX1P62877 108 aa2.29□□□□□ -2.04
RNF4-211ENST00000509206 REG3AQ06141 175 aa2.29□□□□□ -2.04
RNF4-211ENST00000509206 TMEM97Q5BJF2 176 aa2.29□□□□□ -2.04
RNF4-211ENST00000509206 EIF5AL1Q6IS14 154 aaKnown RBP2.29□□□□□ -2.04
RNF4-211ENST00000509206 IZUMO2Q6UXV1 221 aa2.29□□□□□ -2.04
RNF4-211ENST00000509206 TMEM229BQ8NBD8 167 aa2.29□□□□□ -2.04
RNF4-211ENST00000509206 CMTM2Q8TAZ6 248 aa2.29□□□□□ -2.04
RNF4-211ENST00000509206 RETNLBQ9BQ08 111 aa2.29□□□□□ -2.04
RNF4-211ENST00000509206 ALKBH7Q9BT30 221 aaPredicted RBP2.29□□□□□ -2.04
RNF4-211ENST00000509206 TREM1Q9NP99 234 aa2.29□□□□□ -2.04
RNF4-211ENST00000509206 TMEM14CQ9P0S9 112 aa2.29□□□□□ -2.04
RNF4-211ENST00000509206 Q9UF83 564 aa2.29□□□□□ -2.04
RNF4-211ENST00000509206 CARHSP1Q9Y2V2 147 aaKnown RBP2.29□□□□□ -2.04
RNF4-211ENST00000509206 PHLDA3Q9Y5J5 127 aa2.29□□□□□ -2.04
RNF4-211ENST00000509206 TRBV7-3A0A075B6L6 115 aa2.28□□□□□ -2.04
RNF4-211ENST00000509206 IGKV2D-30A0A075B6S6 120 aa2.28□□□□□ -2.04
RNF4-211ENST00000509206 TRBV10-1A0A0K0K1A3 114 aa2.28□□□□□ -2.04
RNF4-211ENST00000509206 RBAKDNA6NC62 111 aa2.28□□□□□ -2.04
RNF4-211ENST00000509206 FNDC10F2Z333 226 aa2.28□□□□□ -2.04
RNF4-211ENST00000509206 F6UZH7 168 aa2.28□□□□□ -2.04
RNF4-211ENST00000509206 SSSCA1O60232 199 aa2.28□□□□□ -2.04
RNF4-211ENST00000509206 TSC22D2O75157 780 aa2.28□□□□□ -2.04
RNF4-211ENST00000509206 APOA1P02647 267 aa2.28□□□□□ -2.04
RNF4-211ENST00000509206 METTL15P1P0C7V9 234 aa2.28□□□□□ -2.04
RNF4-211ENST00000509206 SLC25A6P12236 298 aa2.28□□□□□ -2.04
RNF4-211ENST00000509206 GABARAPL2P60520 117 aa2.28□□□□□ -2.04
RNF4-211ENST00000509206 ARL16Q0P5N6 197 aa2.28□□□□□ -2.04
RNF4-211ENST00000509206 TPRXLQ17RH7 258 aa2.28□□□□□ -2.04
RNF4-211ENST00000509206 FAM74A1Q5RGS3 127 aa2.28□□□□□ -2.04
RNF4-211ENST00000509206 MIC13Q5XKP0 118 aa2.28□□□□□ -2.04
RNF4-211ENST00000509206 KRTAP26-1Q6PEX3 210 aa2.28□□□□□ -2.04
RNF4-211ENST00000509206 C15orf40Q8WUR7 153 aa2.28□□□□□ -2.04
RNF4-211ENST00000509206 PTH2Q96A98 100 aa2.28□□□□□ -2.04
RNF4-211ENST00000509206 HYLS1Q96M11 299 aa2.28□□□□□ -2.04
RNF4-211ENST00000509206 PRRT1Q99946 306 aa2.28□□□□□ -2.04
RNF4-211ENST00000509206 BCL7BQ9BQE9 202 aa2.28□□□□□ -2.04
RNF4-211ENST00000509206 NDFIP1Q9BT67 221 aa2.28□□□□□ -2.04
RNF4-211ENST00000509206 PRR34Q9NV39 138 aa2.28□□□□□ -2.04
RNF4-211ENST00000509206 SCP2D1Q9UJQ7 156 aa2.28□□□□□ -2.04
RNF4-211ENST00000509206 TRBV25-1A0A075B6N4 114 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms