RNA–Protein interactions for RNA: ENST00000508841.1

GYPB-210, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 5

Gene GYPB, Length 610 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-210ENST00000508841 TFF1P04155 84 aa0.06□□□□□ -2.4
GYPB-210ENST00000508841 SSBP1Q04837 148 aaKnown RBP0.06□□□□□ -2.4
GYPB-210ENST00000508841 HYDINQ4G0P3 5121 aa0.06□□□□□ -2.4
GYPB-210ENST00000508841 COL6A5A8TX70 2615 aa0.05□□□□□ -2.4
GYPB-210ENST00000508841 OTOGQ6ZRI0 2925 aa0.05□□□□□ -2.4
GYPB-210ENST00000508841 SCGB1A1P11684 91 aa0.05□□□□□ -2.4
GYPB-210ENST00000508841 COX4I1P13073 169 aa0.05□□□□□ -2.4
GYPB-210ENST00000508841 COX6A2Q02221 97 aa0.05□□□□□ -2.4
GYPB-210ENST00000508841 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.05□□□□□ -2.4
GYPB-210ENST00000508841 MMGT1Q8N4V1 131 aa0.05□□□□□ -2.4
GYPB-210ENST00000508841 IFI27L1Q96BM0 104 aa0.05□□□□□ -2.4
GYPB-210ENST00000508841 NCOR2Q9Y618 2525 aa0.05□□□□□ -2.4
GYPB-210ENST00000508841 NCOR1O75376 2440 aa0.04□□□□□ -2.4
GYPB-210ENST00000508841 MUC12Q9UKN1 5478 aa0.04□□□□□ -2.4
GYPB-210ENST00000508841 CACNA1AO00555 2505 aa0.04□□□□□ -2.4
GYPB-210ENST00000508841 HMCN2Q8NDA2 5059 aa0.04□□□□□ -2.4
GYPB-210ENST00000508841 F5P12259 2224 aa0.04□□□□□ -2.4
GYPB-210ENST00000508841 SMIM11BQ8TCY0 68 aa0.04□□□□□ -2.4
GYPB-210ENST00000508841 RYR3Q15413 4870 aa0.04□□□□□ -2.4
GYPB-210ENST00000508841 ABCA2Q9BZC7 2435 aa0.04□□□□□ -2.4
GYPB-210ENST00000508841 IGSF10Q6WRI0 2623 aa0.03□□□□□ -2.4
GYPB-210ENST00000508841 EPPK1P58107 5090 aaKnown RBP0.03□□□□□ -2.4
GYPB-210ENST00000508841 LRP1Q07954 4544 aaKnown RBP0.03□□□□□ -2.4
GYPB-210ENST00000508841 CCL3L1P16619 93 aa0.03□□□□□ -2.4
GYPB-210ENST00000508841 NCS1P62166 190 aa0.03□□□□□ -2.4
GYPB-210ENST00000508841 FAM74A4Q5TZK3 123 aa0.03□□□□□ -2.4
GYPB-210ENST00000508841 PYDC1Q8WXC3 89 aa0.03□□□□□ -2.4
GYPB-210ENST00000508841 STAB1Q9NY15 2570 aa0.03□□□□□ -2.4
GYPB-210ENST00000508841 VWFP04275 2813 aa0.02□□□□□ -2.41
GYPB-210ENST00000508841 GVQW2A0A096LPI5 108 aaPredicted RBP0.02□□□□□ -2.41
GYPB-210ENST00000508841 SAR1AQ9NR31 198 aa0.02□□□□□ -2.41
GYPB-210ENST00000508841 LSM2Q9Y333 95 aaKnown RBP0.02□□□□□ -2.41
GYPB-210ENST00000508841 FAT3Q8TDW7 4589 aa0.02□□□□□ -2.41
GYPB-210ENST00000508841 HRNRQ86YZ3 2850 aaPredicted RBP0.02□□□□□ -2.41
GYPB-210ENST00000508841 PTPRMP28827 1452 aa0.02□□□□□ -2.41
GYPB-210ENST00000508841 MYH13Q9UKX3 1938 aa0.01□□□□□ -2.41
GYPB-210ENST00000508841 BIRC6Q9NR09 4857 aa0.01□□□□□ -2.41
GYPB-210ENST00000508841 TRBV20-1A0A075B6N2 111 aa0.01□□□□□ -2.41
GYPB-210ENST00000508841 APODP05090 189 aa0.01□□□□□ -2.41
GYPB-210ENST00000508841 TMEM242Q9NWH2 141 aa0.01□□□□□ -2.41
GYPB-210ENST00000508841 CADP27708 2225 aa0.01□□□□□ -2.41
GYPB-210ENST00000508841 RIF1Q5UIP0 2472 aaKnown RBP0.01□□□□□ -2.41
GYPB-210ENST00000508841 STAB2Q8WWQ8 2551 aa0□□□□□ -2.41
GYPB-210ENST00000508841 MT4P47944 62 aa0□□□□□ -2.41
GYPB-210ENST00000508841 DR1Q01658 176 aa0□□□□□ -2.41
GYPB-210ENST00000508841 SLC48A1Q6P1K1 146 aa0□□□□□ -2.41
GYPB-210ENST00000508841 C4orf33Q8N1A6 199 aa0□□□□□ -2.41
GYPB-210ENST00000508841 FAM213BQ8TBF2 198 aa0□□□□□ -2.41
GYPB-210ENST00000508841 PIEZO1Q92508 2521 aa0□□□□□ -2.41
GYPB-210ENST00000508841 SPRR2GQ9BYE4 73 aa0□□□□□ -2.41
GYPB-210ENST00000508841 USH2AO75445 5202 aa-0□□□□□ -2.41
GYPB-210ENST00000508841 MAP1BP46821 2468 aaKnown RBP-0.01□□□□□ -2.41
GYPB-210ENST00000508841 HIVEP3Q5T1R4 2406 aa-0.01□□□□□ -2.41
GYPB-210ENST00000508841 CACNA1CQ13936 2221 aa-0.01□□□□□ -2.41
GYPB-210ENST00000508841 BSNQ9UPA5 3926 aa-0.01□□□□□ -2.41
GYPB-210ENST00000508841 CDK5RAP2Q96SN8 1893 aa-0.01□□□□□ -2.41
GYPB-210ENST00000508841 FLNAP21333 2647 aaKnown RBP-0.01□□□□□ -2.41
GYPB-210ENST00000508841 HERC2O95714 4834 aa-0.01□□□□□ -2.41
GYPB-210ENST00000508841 CREBBPQ92793 2442 aa-0.02□□□□□ -2.41
GYPB-210ENST00000508841 KIAA0100Q14667 2235 aaKnown RBP-0.02□□□□□ -2.41
GYPB-210ENST00000508841 TENM4Q6N022 2769 aa-0.02□□□□□ -2.41
GYPB-210ENST00000508841 SPCS2Q15005 226 aa-0.02□□□□□ -2.41
GYPB-210ENST00000508841 COX7B2Q8TF08 81 aa-0.02□□□□□ -2.41
GYPB-210ENST00000508841 PTPN13Q12923 2485 aa-0.02□□□□□ -2.41
GYPB-210ENST00000508841 LAMA3Q16787 3333 aa-0.02□□□□□ -2.41
GYPB-210ENST00000508841 ACANP16112 2415 aa-0.03□□□□□ -2.41
GYPB-210ENST00000508841 SONP18583 2426 aaKnown RBP-0.03□□□□□ -2.41
GYPB-210ENST00000508841 AKAP11Q9UKA4 1901 aa-0.03□□□□□ -2.41
GYPB-210ENST00000508841 OVOS2A0A0J9YW53 1432 aa-0.03□□□□□ -2.41
GYPB-210ENST00000508841 OVOS2Q6IE36 1432 aa-0.03□□□□□ -2.41
GYPB-210ENST00000508841 NSD1Q96L73 2696 aaPredicted RBP-0.03□□□□□ -2.41
GYPB-210ENST00000508841 TEP1Q99973 2627 aaKnown RBP-0.03□□□□□ -2.41
GYPB-210ENST00000508841 USP9XQ93008 2570 aaPredicted RBP-0.03□□□□□ -2.41
GYPB-210ENST00000508841 A0A087WTM6 91 aa-0.03□□□□□ -2.41
GYPB-210ENST00000508841 KRTAP19-6Q3LI70 58 aa-0.03□□□□□ -2.41
GYPB-210ENST00000508841 V9GYV3 84 aa-0.03□□□□□ -2.41
GYPB-210ENST00000508841 DNHD1Q96M86 4753 aa-0.03□□□□□ -2.41
GYPB-210ENST00000508841 ASXL3Q9C0F0 2248 aa-0.03□□□□□ -2.41
GYPB-210ENST00000508841 POLQO75417 2590 aa-0.03□□□□□ -2.41
GYPB-210ENST00000508841 PHIPQ8WWQ0 1821 aa-0.03□□□□□ -2.42
GYPB-210ENST00000508841 MAP1AP78559 2803 aaPredicted RBP-0.04□□□□□ -2.42
GYPB-210ENST00000508841 DMBT1Q9UGM3 2413 aaPredicted RBP-0.04□□□□□ -2.42
GYPB-210ENST00000508841 TRBV7-1A0A0A6YYK4 115 aa-0.04□□□□□ -2.42
GYPB-210ENST00000508841 NPC2P61916 151 aa-0.04□□□□□ -2.42
GYPB-210ENST00000508841 C20orf197Q8N268 126 aa-0.04□□□□□ -2.42
GYPB-210ENST00000508841 ACACBO00763 2458 aa-0.04□□□□□ -2.42
GYPB-210ENST00000508841 FAM208BQ5VWN6 2430 aa-0.04□□□□□ -2.42
GYPB-210ENST00000508841 CELSR2Q9HCU4 2923 aa-0.04□□□□□ -2.42
GYPB-210ENST00000508841 LRP2P98164 4655 aa-0.04□□□□□ -2.42
GYPB-210ENST00000508841 ZANQ9Y493 2812 aa-0.05□□□□□ -2.42
GYPB-210ENST00000508841 ANKRD30AQ9BXX3 1397 aa-0.05□□□□□ -2.42
GYPB-210ENST00000508841 EP300Q09472 2414 aaPredicted RBP-0.05□□□□□ -2.42
GYPB-210ENST00000508841 PARP14Q460N5 1801 aa-0.05□□□□□ -2.42
GYPB-210ENST00000508841 COL12A1Q99715 3063 aa-0.05□□□□□ -2.42
GYPB-210ENST00000508841 TRAV12-3A0A0B4J271 114 aa-0.05□□□□□ -2.42
GYPB-210ENST00000508841 NMBP08949 121 aa-0.05□□□□□ -2.42
GYPB-210ENST00000508841 KRTAP20-2Q3LI61 65 aa-0.05□□□□□ -2.42
GYPB-210ENST00000508841 AKAP14Q86UN6 197 aa-0.05□□□□□ -2.42
GYPB-210ENST00000508841 VSTM2AQ8TAG5 236 aa-0.05□□□□□ -2.42
GYPB-210ENST00000508841 SCP2D1Q9UJQ7 156 aa-0.05□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms