RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 CRYGDP07320 174 aa10.38□□□□□ -0.75
RNF4-210ENST00000508235 SMIM17P0DL12 118 aa10.38□□□□□ -0.75
RNF4-210ENST00000508235 CT83Q5H943 113 aa10.38□□□□□ -0.75
RNF4-210ENST00000508235 WDR73Q6P4I2 378 aa10.38□□□□□ -0.75
RNF4-210ENST00000508235 C15orf54Q8N8G6 183 aa10.38□□□□□ -0.75
RNF4-210ENST00000508235 AP1S3Q96PC3 154 aa10.38□□□□□ -0.75
RNF4-210ENST00000508235 UPK3BQ9BT76 320 aa10.38□□□□□ -0.75
RNF4-210ENST00000508235 NAT8Q9UHE5 227 aa10.38□□□□□ -0.75
RNF4-210ENST00000508235 IFITM2Q01629 132 aa10.37□□□□□ -0.75
RNF4-210ENST00000508235 LYPD5Q6UWN5 251 aa10.37□□□□□ -0.75
RNF4-210ENST00000508235 ZNRF2Q8NHG8 242 aa10.37□□□□□ -0.75
RNF4-210ENST00000508235 OSTCQ9NRP0 149 aa10.37□□□□□ -0.75
RNF4-210ENST00000508235 MUC21A0A0G2JKD1 596 aa10.36□□□□□ -0.75
RNF4-210ENST00000508235 LOC100131303A0A0U1RQF7 123 aa10.36□□□□□ -0.75
RNF4-210ENST00000508235 MUC21A0A140T8X8 626 aa10.36□□□□□ -0.75
RNF4-210ENST00000508235 CTRLP40313 264 aa10.36□□□□□ -0.75
RNF4-210ENST00000508235 RAB4BP61018 213 aa10.36□□□□□ -0.75
RNF4-210ENST00000508235 LYZL1Q6UWQ5 148 aa10.36□□□□□ -0.75
RNF4-210ENST00000508235 TRBV10-1A0A0K0K1A3 114 aa10.35□□□□□ -0.75
RNF4-210ENST00000508235 TRGC1P0CF51 173 aa10.35□□□□□ -0.75
RNF4-210ENST00000508235 SSTP61278 116 aa10.35□□□□□ -0.75
RNF4-210ENST00000508235 RPL23P62829 140 aaKnown RBP10.35□□□□□ -0.75
RNF4-210ENST00000508235 ZNF56Q15929 161 aa10.35□□□□□ -0.75
RNF4-210ENST00000508235 ISOC2Q96AB3 205 aa10.35□□□□□ -0.75
RNF4-210ENST00000508235 Q9H8V8 135 aa10.35□□□□□ -0.75
RNF4-210ENST00000508235 IGLV2-18A0A075B6J9 118 aa10.34□□□□□ -0.75
RNF4-210ENST00000508235 TIRAPP58753 221 aa10.34□□□□□ -0.75
RNF4-210ENST00000508235 ADIRFQ15847 76 aa10.34□□□□□ -0.75
RNF4-210ENST00000508235 Q6ZSN1 163 aa10.34□□□□□ -0.75
RNF4-210ENST00000508235 C14orf178Q8N769 122 aaPredicted RBP10.34□□□□□ -0.75
RNF4-210ENST00000508235 BORCS7Q96B45 105 aa10.34□□□□□ -0.75
RNF4-210ENST00000508235 CNFNQ9BYD5 112 aa10.34□□□□□ -0.75
RNF4-210ENST00000508235 GFRA4Q9GZZ7 299 aa10.34□□□□□ -0.75
RNF4-210ENST00000508235 FAM231BA6NCW3 169 aa10.33□□□□□ -0.76
RNF4-210ENST00000508235 F5H697 171 aa10.33□□□□□ -0.76
RNF4-210ENST00000508235 NTF3P20783 257 aa10.33□□□□□ -0.76
RNF4-210ENST00000508235 FOXA3P55318 350 aaPredicted RBP10.33□□□□□ -0.76
RNF4-210ENST00000508235 ATP6V0E2Q8NHE4 81 aa10.33□□□□□ -0.76
RNF4-210ENST00000508235 TSKUQ8WUA8 353 aa10.33□□□□□ -0.76
RNF4-210ENST00000508235 GAGE12JA6NER3 117 aa10.32□□□□□ -0.76
RNF4-210ENST00000508235 M0R2N4 97 aa10.32□□□□□ -0.76
RNF4-210ENST00000508235 RPL36AP83881 106 aaKnown RBP10.32□□□□□ -0.76
RNF4-210ENST00000508235 GAGE1Q13065 139 aa10.32□□□□□ -0.76
RNF4-210ENST00000508235 GAGE4Q13068 117 aa10.32□□□□□ -0.76
RNF4-210ENST00000508235 GAGE5Q13069 117 aa10.32□□□□□ -0.76
RNF4-210ENST00000508235 TWIST1Q15672 202 aa10.32□□□□□ -0.76
RNF4-210ENST00000508235 GAGE13Q4V321 117 aa10.32□□□□□ -0.76
RNF4-210ENST00000508235 TTC32Q5I0X7 151 aa10.32□□□□□ -0.76
RNF4-210ENST00000508235 UQCC3Q6UW78 93 aa10.32□□□□□ -0.76
RNF4-210ENST00000508235 OR10G8Q8NGN5 311 aa10.32□□□□□ -0.76
RNF4-210ENST00000508235 GTSF1Q8WW33 167 aa10.32□□□□□ -0.76
RNF4-210ENST00000508235 RPL36ALQ969Q0 106 aaKnown RBP10.32□□□□□ -0.76
RNF4-210ENST00000508235 MSRB1Q9NZV6 116 aa10.32□□□□□ -0.76
RNF4-210ENST00000508235 DYNC2H1Q8NCM8 4307 aaKnown RBP10.32□□□□□ -0.76
RNF4-210ENST00000508235 NBDYA0A0U1RRE5 68 aa10.31□□□□□ -0.76
RNF4-210ENST00000508235 SIVA1O15304 175 aa10.31□□□□□ -0.76
RNF4-210ENST00000508235 Q6ZR54 194 aa10.31□□□□□ -0.76
RNF4-210ENST00000508235 SMIM15Q7Z3B0 74 aa10.31□□□□□ -0.76
RNF4-210ENST00000508235 GTSF1LQ9H1H1 148 aa10.31□□□□□ -0.76
RNF4-210ENST00000508235 DPH3P1Q9H4G8 78 aa10.31□□□□□ -0.76
RNF4-210ENST00000508235 KIF25-AS1Q9Y6Z4 181 aa10.31□□□□□ -0.76
RNF4-210ENST00000508235 PLECQ15149 4684 aaKnown RBP10.31□□□□□ -0.76
RNF4-210ENST00000508235 TRBV7-3A0A075B6L6 115 aa10.3□□□□□ -0.76
RNF4-210ENST00000508235 H7C1H1 209 aa10.3□□□□□ -0.76
RNF4-210ENST00000508235 MGPP08493 103 aa10.3□□□□□ -0.76
RNF4-210ENST00000508235 LINC00694P0DN24 101 aa10.3□□□□□ -0.76
RNF4-210ENST00000508235 PNRC1Q12796 327 aaPredicted RBP10.3□□□□□ -0.76
RNF4-210ENST00000508235 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.3□□□□□ -0.76
RNF4-210ENST00000508235 PGLYRP4Q96LB8 373 aa10.3□□□□□ -0.76
RNF4-210ENST00000508235 V9GYV3 84 aa10.3□□□□□ -0.76
RNF4-210ENST00000508235 A0A087WWC5 75 aa10.29□□□□□ -0.76
RNF4-210ENST00000508235 TRAV8-6A0A0B4J262 113 aa10.29□□□□□ -0.76
RNF4-210ENST00000508235 HIGD1CA8MV81 97 aa10.29□□□□□ -0.76
RNF4-210ENST00000508235 K7EP13 123 aa10.29□□□□□ -0.76
RNF4-210ENST00000508235 EVI2AP22794 236 aa10.29□□□□□ -0.76
RNF4-210ENST00000508235 ALMS1Q8TCU4 4167 aa10.29□□□□□ -0.76
RNF4-210ENST00000508235 TRAV9-2A0A087WT02 112 aa10.28□□□□□ -0.76
RNF4-210ENST00000508235 A0A1B0GUT8 65 aa10.28□□□□□ -0.76
RNF4-210ENST00000508235 LINC00315P59091 139 aa10.28□□□□□ -0.76
RNF4-210ENST00000508235 LELP1Q5T871 98 aa10.28□□□□□ -0.76
RNF4-210ENST00000508235 NAT8BQ9UHF3 227 aa10.28□□□□□ -0.76
RNF4-210ENST00000508235 LYSTQ99698 3801 aa10.27□□□□□ -0.76
RNF4-210ENST00000508235 PPP1R2P9O14990 202 aa10.27□□□□□ -0.77
RNF4-210ENST00000508235 BTF3P20290 206 aaKnown RBP10.27□□□□□ -0.77
RNF4-210ENST00000508235 OR10J3Q5JRS4 329 aa10.27□□□□□ -0.77
RNF4-210ENST00000508235 C1orf134Q5TEV5 83 aa10.27□□□□□ -0.77
RNF4-210ENST00000508235 RYR2Q92736 4967 aa10.26□□□□□ -0.77
RNF4-210ENST00000508235 UBE2D3P61077 147 aa10.26□□□□□ -0.77
RNF4-210ENST00000508235 UBE2D2P62837 147 aa10.26□□□□□ -0.77
RNF4-210ENST00000508235 RIGQ13278 110 aa10.26□□□□□ -0.77
RNF4-210ENST00000508235 LINC00336Q6ZUF6 198 aa10.26□□□□□ -0.77
RNF4-210ENST00000508235 NEXN-AS1Q8NBZ9 246 aa10.26□□□□□ -0.77
RNF4-210ENST00000508235 DNAJC30Q96LL9 226 aa10.26□□□□□ -0.77
RNF4-210ENST00000508235 Q9UF83 564 aa10.26□□□□□ -0.77
RNF4-210ENST00000508235 TNFRSF18Q9Y5U5 241 aa10.26□□□□□ -0.77
RNF4-210ENST00000508235 IGHV3-38A0A0C4DH36 116 aa10.25□□□□□ -0.77
RNF4-210ENST00000508235 SMIM27A0A1W2PRY6 76 aa10.25□□□□□ -0.77
RNF4-210ENST00000508235 M0QY20 66 aa10.25□□□□□ -0.77
RNF4-210ENST00000508235 DNAH10OSP0CZ25 163 aa10.25□□□□□ -0.77
RNF4-210ENST00000508235 SUMO4Q6EEV6 95 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms